FFCP PHASE1:Hg19::chr3:71632743..71632756,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:71632743..71632756,- to FFCP PHASE1:Hg19::chr3:71632743..71632756,-: NSchange) |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=27086 | |EntrezGene=27086 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3823 | |HGNC=3823 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=133bp_to_ENST00000471386_5end | |||
|cluster_id=chr3:71632743..71632756,- | |||
|description=CAGE_peak_16_at_FOXP1_5end | |||
|id=chr3:71632743..71632756,- | |||
|ontology_enrichment_celltype=CL:0000037!1.45e-13!172;CL:0000566!1.45e-13!172;CL:0000738!1.77e-13!140;CL:0000763!2.62e-13!112;CL:0000049!2.62e-13!112;CL:0000988!5.17e-13!182;CL:0000766!3.70e-12!76;CL:0002032!4.52e-12!165;CL:0000837!4.52e-12!165;CL:0000839!4.04e-11!70;CL:0002057!8.77e-11!42;CL:0000557!1.16e-10!71;CL:0002031!4.18e-10!124;CL:0002009!1.67e-09!65;CL:0000860!2.34e-09!45;CL:0002194!1.27e-08!63;CL:0000576!1.27e-08!63;CL:0000040!1.27e-08!63;CL:0000559!1.27e-08!63;CL:0002087!5.65e-08!119 | |||
|ontology_enrichment_celltype_v019=CL:0000576;3.86e-07;48!CL:0000766;5.00e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,5.12e-18,136;CL:0000037,2.14e-17,168;CL:0000988,7.32e-17,177;CL:0000763,1.96e-16,108;CL:0000049,1.96e-16,108;CL:0002032,1.00e-15,161;CL:0000837,1.00e-15,161;CL:0000766,1.69e-15,72;CL:0000839,4.44e-14,66;CL:0000557,8.26e-14,67;CL:0002031,9.87e-14,120;CL:0000860,2.88e-12,42;CL:0002057,2.88e-12,42;CL:0002009,9.45e-12,61;CL:0002087,1.67e-10,115;CL:0002194,1.71e-10,59;CL:0000576,1.71e-10,59;CL:0000040,1.71e-10,59;CL:0000559,1.71e-10,59;CL:0000473,3.78e-10,48;CL:0000234,3.78e-10,48;CL:0000134,5.88e-09,354;CL:0002320,2.11e-08,361;CL:0002393,2.72e-07,9;CL:0002397,2.72e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.33e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.71e-13!102;UBERON:0003061!2.71e-13!102;UBERON:0002193!3.20e-12!112;UBERON:0002371!1.28e-09!80;UBERON:0002405!7.35e-09!115;UBERON:0001474!2.41e-08!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.21e-16,98;UBERON:0003061,1.21e-16,98;UBERON:0002193,2.99e-16,108;UBERON:0002405,9.74e-13,93;UBERON:0002371,1.62e-12,76;UBERON:0001474,1.57e-10,82;UBERON:0002384,5.46e-09,371;UBERON:0004765,8.67e-09,90 | |||
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| ||
|short_description=p16@FOXP1 | |||
}} | }} |
Latest revision as of 14:00, 19 September 2015
Short description: | p16@FOXP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_FOXP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 133bp_to_ENST00000471386_5end |
EntrezGene: | FOXP1 |
HGNC: | 3823 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 5.12e-18 | 136 |
hematopoietic stem cell | 2.14e-17 | 168 |
hematopoietic cell | 7.32e-17 | 177 |
myeloid cell | 1.96e-16 | 108 |
common myeloid progenitor | 1.96e-16 | 108 |
hematopoietic oligopotent progenitor cell | 1.00e-15 | 161 |
hematopoietic multipotent progenitor cell | 1.00e-15 | 161 |
myeloid leukocyte | 1.69e-15 | 72 |
myeloid lineage restricted progenitor cell | 4.44e-14 | 66 |
granulocyte monocyte progenitor cell | 8.26e-14 | 67 |
hematopoietic lineage restricted progenitor cell | 9.87e-14 | 120 |
classical monocyte | 2.88e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.88e-12 | 42 |
macrophage dendritic cell progenitor | 9.45e-12 | 61 |
nongranular leukocyte | 1.67e-10 | 115 |
monopoietic cell | 1.71e-10 | 59 |
monocyte | 1.71e-10 | 59 |
monoblast | 1.71e-10 | 59 |
promonocyte | 1.71e-10 | 59 |
defensive cell | 3.78e-10 | 48 |
phagocyte | 3.78e-10 | 48 |
mesenchymal cell | 5.88e-09 | 354 |
connective tissue cell | 2.11e-08 | 361 |
intermediate monocyte | 2.72e-07 | 9 |
CD14-positive, CD16-positive monocyte | 2.72e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.21e-16 | 98 |
blood island | 1.21e-16 | 98 |
hemolymphoid system | 2.99e-16 | 108 |
immune system | 9.74e-13 | 93 |
bone marrow | 1.62e-12 | 76 |
bone element | 1.57e-10 | 82 |
connective tissue | 5.46e-09 | 371 |
skeletal element | 8.67e-09 | 90 |