FFCP PHASE1:Hg19::chr3:71179699..71179744,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:71179699..71179744,- to FFCP PHASE1:Hg19::chr3:71179699..71179744,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=27086 | |EntrezGene=27086 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3823 | |HGNC=3823 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc003doj.2,uc003dok.2_5end | |||
|cluster_id=chr3:71179699..71179744,- | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_2_at_FOXP1_5end | |||
|id=chr3:71179699..71179744,- | |||
|ontology_enrichment_celltype=CL:0000791!7.25e-12!18;CL:0000789!7.25e-12!18;CL:0002420!7.25e-12!18;CL:0002419!7.25e-12!18;CL:0000790!7.25e-12!18;CL:0000542!5.92e-11!53;CL:0000051!5.92e-11!53;CL:0000838!1.77e-10!52;CL:0000625!6.88e-08!11;CL:0000084!5.50e-07!25;CL:0000827!5.50e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000791;6.00e-12;18!CL:0000789;6.00e-12;18!CL:0002419;6.00e-12;18!CL:0000625;6.15e-08;11!CL:0000236;1.01e-07;13!CL:0000542;1.76e-07;53!CL:0000084;4.79e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,6.51e-12,18;CL:0000789,6.51e-12,18;CL:0002420,6.51e-12,18;CL:0002419,6.51e-12,18;CL:0000790,6.51e-12,18;CL:0000542,2.84e-11,53;CL:0000051,2.84e-11,53;CL:0000838,8.66e-11,52;CL:0000625,6.44e-08,11;CL:0000084,4.84e-07,25;CL:0000827,4.84e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000790;6.00e-12;18!CL:0000051;1.76e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.26e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002390;4.29e-08;32!UBERON:0002193;3.50e-07;42!UBERON:0000178;8.63e-07;15!UBERON:0000179;8.63e-07;15!UBERON:0000463;8.63e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.92e-08,114;UBERON:0000178,9.48e-07,15;UBERON:0000179,9.48e-07,15;UBERON:0000463,9.48e-07,15 | |||
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| ||
|short_description=p2@FOXP1 | |||
}} | }} |
Latest revision as of 13:05, 19 September 2015
Short description: | p2@FOXP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FOXP1_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 0bp_to_uc003doj.2, uc003dok.2_5end |
EntrezGene: | FOXP1 |
HGNC: | 3823 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 6.51e-12 | 18 |
alpha-beta T cell | 6.51e-12 | 18 |
immature T cell | 6.51e-12 | 18 |
mature T cell | 6.51e-12 | 18 |
immature alpha-beta T cell | 6.51e-12 | 18 |
lymphocyte | 2.84e-11 | 53 |
common lymphoid progenitor | 2.84e-11 | 53 |
lymphoid lineage restricted progenitor cell | 8.66e-11 | 52 |
CD8-positive, alpha-beta T cell | 6.44e-08 | 11 |
T cell | 4.84e-07 | 25 |
pro-T cell | 4.84e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.92e-08 | 114 |
blood | 9.48e-07 | 15 |
haemolymphatic fluid | 9.48e-07 | 15 |
organism substance | 9.48e-07 | 15 |