FFCP PHASE1:Hg19::chr3:52567747..52567788,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:52567747..52567788,- to FFCP PHASE1:Hg19::chr3:52567747..52567788,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=64943 | |EntrezGene=64943 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25717 | |HGNC=25717 | ||
|TSSclassifier=strong | |||
|UniProt=E9PAL9,C9JTZ6,Q9H857 | |UniProt=E9PAL9,C9JTZ6,Q9H857 | ||
|association_with_transcript=4bp_to_ENST00000307092,ENST00000422318,ENST00000459839,NM_001134231,uc003den.2,uc010hmi.2_5end | |||
|cluster_id=chr3:52567747..52567788,- | |||
|description=CAGE_peak_2_at_NT5DC2_5end | |||
|id=chr3:52567747..52567788,- | |||
|ontology_enrichment_celltype=CL:0000055!3.21e-27!180;CL:0002321!4.01e-19!248;CL:0000220!2.21e-18!246;CL:0000393!1.13e-13!60;CL:0000211!1.13e-13!60;CL:0000183!2.11e-13!59;CL:0000144!5.18e-13!625;CL:0002371!2.65e-12!591;CL:0000680!4.70e-12!57;CL:0000056!4.70e-12!57;CL:0000355!4.70e-12!57;CL:0000012!1.16e-11!682;CL:0000187!1.47e-11!54;CL:0000548!1.66e-11!679;CL:0000004!1.66e-11!679;CL:0000255!1.66e-11!679;CL:0000133!1.18e-10!59;CL:0000192!1.34e-10!42;CL:0000514!1.34e-10!42;CL:0000222!3.27e-10!119;CL:0000221!6.40e-10!71;CL:0000333!2.03e-09!41;CL:0000359!5.86e-09!32;CL:0002319!2.45e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.15e-08;32!CL:0000192;6.06e-08;43!CL:0000393;6.68e-08;61!CL:0000211;6.68e-08;61!CL:0002319;4.07e-07;25!CL:0000187;4.30e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.51e-17,250;CL:0000393,5.04e-14,61;CL:0000211,5.04e-14,61;CL:0000680,2.41e-12,58;CL:0000056,2.41e-12,58;CL:0000355,2.41e-12,58;CL:0000187,8.01e-12,55;CL:0000192,8.80e-11,43;CL:0000514,8.80e-11,43;CL:0000133,6.91e-10,59;CL:0000222,9.25e-10,121;CL:0000359,3.25e-09,32;CL:0000221,3.81e-09,72;CL:0000333,7.13e-09,41;CL:0002319,3.70e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000514;6.06e-08;43!CL:0000355;2.76e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!3.77e-13!79;UBERON:0007798!3.77e-13!79;UBERON:0000486!1.34e-12!82;UBERON:0005256!4.25e-12!143;UBERON:0003914!5.13e-12!118;UBERON:0000914!9.60e-12!83;UBERON:0002329!9.60e-12!83;UBERON:0003077!9.60e-12!83;UBERON:0003059!9.60e-12!83;UBERON:0007282!9.60e-12!83;UBERON:0009618!9.60e-12!83;UBERON:0007285!9.60e-12!83;UBERON:0004290!1.32e-11!70;UBERON:0000119!1.98e-11!312;UBERON:0000490!3.02e-11!138;UBERON:0004872!3.82e-11!84;UBERON:0000483!1.05e-10!309;UBERON:0004535!2.00e-10!110;UBERON:0001009!2.83e-10!113;UBERON:0001134!3.70e-10!61;UBERON:0002036!3.70e-10!61;UBERON:0003082!3.70e-10!61;UBERON:0000475!5.12e-10!365;UBERON:0002385!1.43e-09!63;UBERON:0001015!1.43e-09!63;UBERON:0000383!1.43e-09!63;UBERON:0000055!2.34e-09!69;UBERON:0001637!3.66e-09!42;UBERON:0003509!3.66e-09!42;UBERON:0004572!3.66e-09!42;UBERON:0001981!6.95e-09!60;UBERON:0007500!6.95e-09!60;UBERON:0004537!6.95e-09!60;UBERON:0006965!6.95e-09!60;UBERON:0002100!2.81e-08!216;UBERON:0000468!2.12e-07!659;UBERON:0000481!3.40e-07!347 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,2.51e-14,78;UBERON:0002049,1.86e-13,78;UBERON:0007798,1.86e-13,78;UBERON:0000486,5.10e-13,83;UBERON:0000490,7.36e-13,148;UBERON:0003104,1.75e-12,160;UBERON:0009142,1.75e-12,160;UBERON:0002329,3.62e-12,71;UBERON:0003059,3.62e-12,71;UBERON:0007282,3.62e-12,71;UBERON:0004290,3.62e-12,71;UBERON:0009618,3.62e-12,71;UBERON:0007524,4.60e-12,73;UBERON:0004535,1.22e-11,109;UBERON:0003077,1.26e-11,72;UBERON:0007285,1.26e-11,72;UBERON:0001009,1.83e-11,112;UBERON:0005256,2.52e-11,122;UBERON:0003914,3.10e-11,117;UBERON:0004872,6.91e-11,83;UBERON:0001134,1.19e-10,62;UBERON:0002036,1.19e-10,62;UBERON:0003082,1.19e-10,62;UBERON:0000119,2.78e-10,309;UBERON:0002385,6.08e-10,64;UBERON:0001015,6.08e-10,64;UBERON:0000383,6.08e-10,64;UBERON:0000483,1.40e-09,306;UBERON:0000055,1.69e-09,68;UBERON:0001637,3.25e-09,42;UBERON:0003509,3.25e-09,42;UBERON:0004572,3.25e-09,42;UBERON:0007500,5.30e-09,59;UBERON:0001981,5.30e-09,59;UBERON:0004537,5.30e-09,59;UBERON:0006965,5.30e-09,59;UBERON:0002100,4.16e-07,199 | |||
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| ||
|short_description=p2@NT5DC2 | |||
}} | }} |
Latest revision as of 00:16, 19 September 2015
Short description: | p2@NT5DC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NT5DC2_5end |
Coexpression cluster: | NA |
Association with transcript: | 4bp_to_ENST00000307092, ENST00000422318, ENST00000459839, NM_001134231, uc003den.2, uc010hmi.2_5end |
EntrezGene: | NT5DC2 |
HGNC: | 25717 |
UniProt: | E9PAL9C9JTZ6Q9H857 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.51e-17 | 250 |
electrically responsive cell | 5.04e-14 | 61 |
electrically active cell | 5.04e-14 | 61 |
muscle precursor cell | 2.41e-12 | 58 |
myoblast | 2.41e-12 | 58 |
multi-potent skeletal muscle stem cell | 2.41e-12 | 58 |
muscle cell | 8.01e-12 | 55 |
smooth muscle cell | 8.80e-11 | 43 |
smooth muscle myoblast | 8.80e-11 | 43 |
neurectodermal cell | 6.91e-10 | 59 |
mesodermal cell | 9.25e-10 | 121 |
vascular associated smooth muscle cell | 3.25e-09 | 32 |
ectodermal cell | 3.81e-09 | 72 |
migratory neural crest cell | 7.13e-09 | 41 |
neural cell | 3.70e-07 | 25 |