FFCP PHASE1:Hg19::chr3:42003613..42003636,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:42003613..42003636,- to FFCP PHASE1:Hg19::chr3:42003613..42003636,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54986 | |EntrezGene=54986 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15784 | |HGNC=15784 | ||
|TSSclassifier=strong | |||
|UniProt=C9JVZ3 | |UniProt=C9JVZ3 | ||
|association_with_transcript=0bp_to_ENST00000414606_5end | |||
|cluster_id=chr3:42003613..42003636,- | |||
|coexpression_cluster_id=C22 | |||
|description=CAGE_peak_3_at_ULK4_5end | |||
|id=chr3:42003613..42003636,- | |||
|ontology_enrichment_celltype=CL:0000738!4.51e-19!140;CL:0000037!9.11e-14!172;CL:0000566!9.11e-14!172;CL:0002087!1.00e-13!119;CL:0002031!2.30e-13!124;CL:0000988!7.60e-13!182;CL:0002032!3.47e-12!165;CL:0000837!3.47e-12!165;CL:0000542!8.48e-09!53;CL:0000051!8.48e-09!53;CL:0000838!1.72e-08!52;CL:0000766!2.32e-07!76;CL:0000557!3.28e-07!71;CL:0002057!8.84e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000791;4.40e-15;18!CL:0000789;4.40e-15;18!CL:0002419;4.40e-15;18!CL:0000624;4.59e-12;6!CL:0000236;1.79e-11;13!CL:0000542;1.34e-10;53!CL:0000084;8.08e-10;25!CL:0000625;3.66e-07;11!CL:0000623;5.93e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,6.34e-25,136;CL:0000037,6.37e-20,168;CL:0000988,4.70e-18,177;CL:0002031,8.95e-18,120;CL:0002032,1.89e-17,161;CL:0000837,1.89e-17,161;CL:0002087,5.04e-17,115;CL:0000838,5.63e-17,52;CL:0000542,1.68e-16,53;CL:0000051,1.68e-16,53;CL:0000791,2.82e-15,18;CL:0000789,2.82e-15,18;CL:0002420,2.82e-15,18;CL:0002419,2.82e-15,18;CL:0000790,2.82e-15,18;CL:0000624,5.68e-12,6;CL:0000236,9.10e-11,14;CL:0000084,5.98e-10,25;CL:0000827,5.98e-10,25;CL:0000625,2.24e-07,11;CL:0000623,5.77e-07,3;CL:0000825,5.77e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;4.40e-15;18!CL:0000051;1.34e-10;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.36e-07!102;UBERON:0003061!2.36e-07!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.281908808191942,0,0,0.872338524100369,0,0.631719873426831,0.261185628199839,0.245733936501509,0,0.218441372130172,0,0.123766352960047,0,0,0,0.730310090387373,0,0,0,0.313454721478088,0.572471974262113,0.136874425072884,0,0.229240217243854,0.738905305049512,0.393553906568396,3.14691421479123,4.22212337906934,0.77408061658038,0,0,0.369754010166788,0.154934401160603,0.142169232487422,0,0,2.00544447470142,1.73608696572681,0.223915474239924,0.971680998056939,0,0.290796477559129,0.377875943688809,0.727752183563449,2.09186133215116,0,0.619412741790207,0.575384784644301,1.0246428261164,1.89185783910868,0.689491361473237,0.645484683583826,1.35426486594342,0.752969358170419,0.272906150057846,1.12361742222542,0.918251677112708,0.320929027076094,0.639337125799041,1.31940520074686,1.19678194572979,0,1.7412554317715,0,0.622822248995575,2.00998932205395,0.521482918420201,2.38907729175628,1.81619850790011,0.368277635987565,0.632924774881769,0.211255286311942,0.850417199860174,0.419317291016752,0.336985893439485,0.450530678524519,0.48217676009124,0.855038231223746,0.19891667719909,0.182664153764634,1.75996244461323,1.63841583378639,2.66852776159066,2.56038133539904,2.40237592221607,1.14950487990897,0,0,3.41527781465669,2.93618594685469,2.6759125968766,1.32171328579026,3.92355994087075,1.05353633910031,8.45852011489482,9.03924754323079,7.81285696198135,1.17030546773475,3.91106719960308,3.31413464014313,1.94826728407911,1.33692548262208,2.06224135232386,2.21533894583621,1.89562704635511,0.768547918354051,1.04047478047903,0.493313713811028,1.65810010671509,0.579606171470105,3.70716407905151,4.0131124213457,1.04535523804977,1.24640276967323,4.21542542962113,3.09264700934367,4.30133476433155,1.59282707162048,1.30216690771284,0,1.95747654801105,2.30375900077953,0,0.947109008176067,0,5.44338206706778,8.02320587350522,6.95157138637435,0,0,0,0,0,0.579386075843295,0.795285947051099,0.486634870302636,0.378139268656271,0,0.087834785693126,1.44076983047484,0,0,0,0.522389211897802,0.132957960518865,1.43094374583205,0.571994910780128,1.48583000531826,0.596287222100115,0,0.347140501607594,1.13061588384802,0,0.275118041940067,0,0.516833518338658,0,0.33472061276467,0,0.760272105718513,0,0.367663080345869,0,0.357198913136319,0,0.112611480483322,0,0,0.366403487860815,1.31780417436063,0,0,0.496971951695318,0.12663051166458,1.05927344650575,1.43418310374407,0.354668382198357,0,0,0,0.622422070799533,0.67355336034844,0,0.454072282934794,0,0,0,0.570471821544449,0.149448680551801,0.587172493218824,0.323745888736263,0.280901613404497,0,0.122834317311768,0.103325781175765,0,0.247266929278557,0,0,0,0.125118519871964,0,0.438977620880838,0,0.300476117813194,0.340296549480063,1.4351170855109,0.213557388818567,0,0.300091096084402,0.309157587715317,0.257640540045629,0,0.675105328965065,0.68205903612839,0.504867548488229,0.276149695926898,0.646584227275248,1.42003837006646,0.503760491138201,0,0.193260853163297,0.272746120590835,0,0.365921118388786,0.132529768321485,0.464775771478074,0,0.504641701751257,1.09493207722749,0,0,0,0.464367928031979,0,0.354920400119532,0.168584690078102,0,0.110293972732394,0.653638332277218,0.474541238222193,0.404493924480493,0.392442930250692,0,0,0,0,0,0,0,0,0.882926198829301,0.614942192715568,0,0.109750285408626,0,0.201057944823262,0,0.325808305310325,0,0,0.34779121492523,0.117408694235822,0.288732895522148,0.462985512576611,0.380508304469197,0,0,0,0.468008530278475,0,0,0.16798212819886,0,0.0895585227028483,0,0,0.985326475791887,0.088048434013226,3.52457796419313,1.44119953416961,2.90357596880674,0.063497894292169,0,0,0,0.102827492703324,0.901029173531752,0,0.112131084345361,1.30788020649984,0.07333828582095,0.387815147273333,0,0,0,0,0.514414748524284,0,0,0.142977993658148,0,0,0.325736184293735,0,0,0.301439377059586,1.74306691720059,0.499864955910285,0,0,2.10833939483032,0.958499421966331,0,0,0.144781306667579,0,0,0.336255431980582,4.53170748464433,5.39068937148793,5.77543663258868,0,0,0,0.167516265334349,0,1.49801404789436,0,2.07207756718018,0.12269149171914,0,0.542530047399471,0.207970861530807,0,0,0.117141414992713,0.300946099727719,0,1.03473071292505,0.664225598535437,0.184369168541703,0,0,0,2.48121631347465,2.5885704098234,2.77491650288955,0.606255142892519,0,0,0.496215615637554,0.306923946576125,0,0.256278298511402,0,0.160853921143607,0,0.154209693802656,0.177561725313127,0.164254312027618,0,0.116210378459959,0,0.200506470303285,0,0.114814448164607,0.546273504020151,0,0,0.15403067420883,0,0,0.105551628892876,0,0.340187410553031,0.215915916102139,0,0.270946437543853,0.501689773854853,0.254876273045038,0,0,0,0,0.256450125116389,0,0.650756789328606,0.412164046590889,0.27470839445503,0.082509499920588,0,0,0,0.096670718292122,0.154048617114644,0,0.275673144969061,0.214840489736547,0.145016693914229,0.340906509664404,0.0890320356467374,0,0,0.765676274967505,0.2023155617111,0.464845549297286,0.62962469366128,0,0.308033580176089,0,0,0,0.858749320451947,0.372158369359667,0,0.19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| ||
|short_description=p3@ULK4 | |||
}} | }} |
Latest revision as of 05:35, 18 September 2015
Short description: | p3@ULK4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ULK4_5end |
Coexpression cluster: | C22_CD4_CD8_Natural_Basophils_CD14_Peripheral_CD19 |
Association with transcript: | 0bp_to_ENST00000414606_5end |
EntrezGene: | ULK4 |
HGNC: | 15784 |
UniProt: | C9JVZ3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 6.34e-25 | 136 |
hematopoietic stem cell | 6.37e-20 | 168 |
hematopoietic cell | 4.70e-18 | 177 |
hematopoietic lineage restricted progenitor cell | 8.95e-18 | 120 |
hematopoietic oligopotent progenitor cell | 1.89e-17 | 161 |
hematopoietic multipotent progenitor cell | 1.89e-17 | 161 |
nongranular leukocyte | 5.04e-17 | 115 |
lymphoid lineage restricted progenitor cell | 5.63e-17 | 52 |
lymphocyte | 1.68e-16 | 53 |
common lymphoid progenitor | 1.68e-16 | 53 |
mature alpha-beta T cell | 2.82e-15 | 18 |
alpha-beta T cell | 2.82e-15 | 18 |
immature T cell | 2.82e-15 | 18 |
mature T cell | 2.82e-15 | 18 |
immature alpha-beta T cell | 2.82e-15 | 18 |
CD4-positive, alpha-beta T cell | 5.68e-12 | 6 |
B cell | 9.10e-11 | 14 |
T cell | 5.98e-10 | 25 |
pro-T cell | 5.98e-10 | 25 |
CD8-positive, alpha-beta T cell | 2.24e-07 | 11 |
natural killer cell | 5.77e-07 | 3 |
pro-NK cell | 5.77e-07 | 3 |