FFCP PHASE1:Hg19::chr3:187455680..187455700,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:187455680..187455700,- to FFCP PHASE1:Hg19::chr3:187455680..187455700,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=604 | |EntrezGene=604 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1001 | |HGNC=1001 | ||
|TSSclassifier=strong | |||
|UniProt=C9JL16 | |UniProt=C9JL16 | ||
|association_with_transcript=31bp_to_ENST00000438077_5end | |||
|cluster_id=chr3:187455680..187455700,- | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_4_at_BCL6_5end | |||
|id=chr3:187455680..187455700,- | |||
|ontology_enrichment_celltype=CL:0002009!4.27e-27!65;CL:0002057!5.10e-26!42;CL:0002194!1.32e-25!63;CL:0000576!1.32e-25!63;CL:0000040!1.32e-25!63;CL:0000559!1.32e-25!63;CL:0000557!3.14e-24!71;CL:0000766!7.63e-24!76;CL:0000860!3.13e-23!45;CL:0000839!3.26e-22!70;CL:0000763!3.90e-12!112;CL:0000049!3.90e-12!112;CL:0000738!1.78e-09!140;CL:0000136!2.31e-09!15;CL:0002087!3.71e-09!119;CL:0002031!8.48e-09!124 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.43e-62;39!CL:0000234;1.43e-62;39!CL:0000860;5.95e-58;33!CL:0002057;5.95e-58;33!CL:0000576;1.23e-30;48!CL:0000766;1.76e-27;69!CL:0000235;6.98e-18;6!CL:0000136;1.05e-12;13!CL:0000763;2.05e-12;100!CL:0002087;8.87e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.22e-71,48;CL:0000234,2.22e-71,48;CL:0002009,1.54e-59,61;CL:0002194,2.08e-58,59;CL:0000576,2.08e-58,59;CL:0000040,2.08e-58,59;CL:0000559,2.08e-58,59;CL:0000860,4.80e-56,42;CL:0002057,4.80e-56,42;CL:0000557,2.23e-53,67;CL:0000766,4.91e-52,72;CL:0000839,2.97e-51,66;CL:0000763,2.46e-33,108;CL:0000049,2.46e-33,108;CL:0002031,1.45e-25,120;CL:0002087,2.01e-25,115;CL:0000738,2.18e-24,136;CL:0002032,4.82e-19,161;CL:0000837,4.82e-19,161;CL:0000988,1.03e-18,177;CL:0000037,7.78e-18,168;CL:0000235,1.50e-17,6;CL:0000134,3.88e-12,354;CL:0002320,1.17e-11,361;CL:0000136,1.08e-10,15;CL:0000219,5.65e-10,386;CL:0000048,6.17e-08,427;CL:0000723,1.17e-07,433;CL:0000034,2.68e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;1.15e-42;42!CL:0000049;5.52e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.23e-21!80;UBERON:0002390!6.44e-20!102;UBERON:0003061!6.44e-20!102;UBERON:0002193!4.21e-19!112;UBERON:0001474!9.74e-19!86;UBERON:0002405!5.73e-18!115;UBERON:0004765!4.98e-15!101;UBERON:0001434!4.98e-15!101;UBERON:0003081!4.38e-13!216;UBERON:0007023!4.72e-09!115;UBERON:0002204!7.14e-09!167;UBERON:0000468!1.56e-08!659;UBERON:0000467!3.66e-08!625;UBERON:0000926!4.48e-08!448;UBERON:0004120!4.48e-08!448;UBERON:0006603!4.48e-08!448;UBERON:0000480!4.57e-08!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0002081;9.11e-07;2!UBERON:0002133;9.11e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.10e-48,76;UBERON:0001474,2.07e-44,82;UBERON:0002390,6.36e-40,98;UBERON:0003061,6.36e-40,98;UBERON:0004765,1.36e-39,90;UBERON:0002405,5.36e-38,93;UBERON:0002193,2.85e-35,108;UBERON:0001434,1.20e-34,100;UBERON:0003081,2.84e-20,203;UBERON:0002204,5.37e-18,167;UBERON:0000926,1.67e-13,315;UBERON:0004120,1.67e-13,315;UBERON:0006603,1.67e-13,315;UBERON:0002384,9.48e-12,371;UBERON:0002081,8.74e-07,2;UBERON:0010227,8.74e-07,2;UBERON:0002133,9.27e-07,2 | |||
|phase1_expression=0.726713517082227,2.14100523890983,0.845726424575827,1.0007329835313,1.78784437770915,0.872338524100369,2.53299878168311,0,1.04474251279935,0,0,0.218441372130172,0,0,0,0.672325146451775,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0,0,0,0,0,0,0.928896739896456,0,0,0,0,0.142169232487422,0,0,2.60707781711184,2.82114131930607,0.447830948479849,1.29557466407592,0.515151135268373,0.581592955118259,1.51150377475524,1.21292030593908,3.48643555358527,3.28934310417461,2.47765096716083,24.4538533473828,12.808035326455,8.0403958162119,3.7922024881028,1.29096936716765,5.41705946377367,1.69418105588344,0.272906150057846,0.898893937780338,3.97909060082173,1.92557416245656,1.91801137739712,20.7806319117631,17.9517291859469,16.1965405202424,8.9964863974861,5.6738522469114,4.9825779919646,15.8286659111748,11.4726242052444,9.33912032232002,10.8971910474006,4.78760926783834,3.79754864929061,0.422510572623884,0,0,0.336985893439485,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0.670700859703636,0,0,0,0,0,0,0,0,0.087834785693126,0.196468613246569,0,0,0,0.870648686496336,0.930705723632056,0,0,0,0.198762407366705,0,0.347140501607594,0,0,0.275118041940067,0.208994966536811,0,0.35576626268671,0,0,0,0,0.367663080345869,0.81014194788176,0,0,0.337834441449967,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0.163461903113459,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0,0,0,0,0,0.206105058476878,0,0.18611685633159,0,0.0974370051611986,0,0.0920498986422993,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0.168584690078102,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,3.9313088667105,1.18157981336281,0,0,0,0,0,0.201057944823262,0,0,0,0,0,0.117408694235822,0.144366447761074,0,0,0,0,3.20082107913617,4.21207677250628,2.0808362720422,0,0,0,0.0895585227028483,0.581267877027924,0,0,0,0,0.288239906833923,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0.258543431515556,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,1.00451418286425,2.10833939483032,0,0,0,0.434343920002738,0,0,0,0,0,0,0,0,0,0,0,1.49801404789436,2.99161459204025,0.414415513436035,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0.647142602455851,0.213455115606889,0,0,0,0,0.306923946576125,0.561320188866147,0.384417447767103,1.02341449813341,0,1.48418066444991,0,0,0.164254312027618,0,0.116210378459959,0.120859449591622,0,0,0,0,0.131124414959424,0,0.15403067420883,0,0,0,0,0.340187410553031,0.647747748306418,0,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0,0,0,0,0,0,0,0.15350367472613,0,0.107420244868274,0,0.170453254832202,0,0,0,0.382838137483752,0.10115778085555,0,0,0,0.308033580176089,0,0,0,0.143124886741991,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487426979262569,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0.670302275535787,0,0.282431402330337,0.43050537267123,0,1.33029046061003,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3441308683503,0,0,0,0,0,0,0,0.140669416410513,0,0.16480387422676,0,0.597743964753209,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,5.79999660347835,0,0,0,0,0,0,0,0.120596438625408,0,0,0.295547618953547,0,0,0.139423744278603,0,0,0,0,0,0.31900115973192,0.0915975934018623,1.5991043280559,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0.176915129006678,0,2.96521128680622,1.23563938946503,0.417687798021821,0,2.40773294189637,0.234264445725339,0,0,0,0.789168805698781,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0.873633341210151,0,0,0,0,0.290967049465258,0,0,0,0,0,0.195551382734803,0.0801588202515337,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,1.39641200636127,0.229160424011684,2.15361907373044,0.399358000997982,0.858452096273142,0.223171457441873,0.268733889946905,0,0,0,0.0824158583811665,0,0,0,0,0,0,0,0,0.674921674654501,1.5476039091159,0.0607495566580247,0,0,0.209818352539992,0.105600336519406,0,0,1.42939065274673,0.662091970365432,0,0,0,0.653174720218818,0,0,0.170388021785422,0,2.05173127149315,0,0.129282956361551,0,0,0,0.320362237703084,0.943225830597996,2.07119527673598,0.496166021811951,0,0,0,0.544017803369474,1.2534494701135,1.22538230705385,1.31149052283922,0,0,0.122026264901963,0.1251909307065,1.14681839138014,0.443716206147409,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0.754703705257725,1.77962244319307,0,0,0,0,0.159296767163702,0.899606224327209,0,0,0,0.521745061811734,0,0,0,0.363697318405119,0.322231671127465,0,0.796191777397232,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0.138258436151731,0,0.132864840313363,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.319267718114302,0.205116364240755,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0.147856086217045,0,0,0,0,0,0,1.48863353516788,0,0.127762427639595,0,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| 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| ||
|short_description=p4@BCL6 | |||
}} | }} |
Latest revision as of 06:44, 17 September 2015
Short description: | p4@BCL6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_BCL6_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 31bp_to_ENST00000438077_5end |
EntrezGene: | BCL6 |
HGNC: | 1001 |
UniProt: | C9JL16 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.22e-71 | 48 |
phagocyte | 2.22e-71 | 48 |
macrophage dendritic cell progenitor | 1.54e-59 | 61 |
monopoietic cell | 2.08e-58 | 59 |
monocyte | 2.08e-58 | 59 |
monoblast | 2.08e-58 | 59 |
promonocyte | 2.08e-58 | 59 |
classical monocyte | 4.80e-56 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.80e-56 | 42 |
granulocyte monocyte progenitor cell | 2.23e-53 | 67 |
myeloid leukocyte | 4.91e-52 | 72 |
myeloid lineage restricted progenitor cell | 2.97e-51 | 66 |
myeloid cell | 2.46e-33 | 108 |
common myeloid progenitor | 2.46e-33 | 108 |
hematopoietic lineage restricted progenitor cell | 1.45e-25 | 120 |
nongranular leukocyte | 2.01e-25 | 115 |
leukocyte | 2.18e-24 | 136 |
hematopoietic oligopotent progenitor cell | 4.82e-19 | 161 |
hematopoietic multipotent progenitor cell | 4.82e-19 | 161 |
hematopoietic cell | 1.03e-18 | 177 |
hematopoietic stem cell | 7.78e-18 | 168 |
macrophage | 1.50e-17 | 6 |
mesenchymal cell | 3.88e-12 | 354 |
connective tissue cell | 1.17e-11 | 361 |
fat cell | 1.08e-10 | 15 |
motile cell | 5.65e-10 | 386 |
multi fate stem cell | 6.17e-08 | 427 |
somatic stem cell | 1.17e-07 | 433 |
stem cell | 2.68e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.10e-48 | 76 |
bone element | 2.07e-44 | 82 |
hematopoietic system | 6.36e-40 | 98 |
blood island | 6.36e-40 | 98 |
skeletal element | 1.36e-39 | 90 |
immune system | 5.36e-38 | 93 |
hemolymphoid system | 2.85e-35 | 108 |
skeletal system | 1.20e-34 | 100 |
lateral plate mesoderm | 2.84e-20 | 203 |
musculoskeletal system | 5.37e-18 | 167 |
mesoderm | 1.67e-13 | 315 |
mesoderm-derived structure | 1.67e-13 | 315 |
presumptive mesoderm | 1.67e-13 | 315 |
connective tissue | 9.48e-12 | 371 |
cardiac atrium | 8.74e-07 | 2 |
future cardiac atrium | 8.74e-07 | 2 |
atrioventricular valve | 9.27e-07 | 2 |