FFCP PHASE1:Hg19::chr3:18486354..18486377,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:18486354..18486377,- to FFCP PHASE1:Hg19::chr3:18486354..18486377,-: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6304 | |EntrezGene=6304 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10541 | |HGNC=10541 | ||
|TSSclassifier=strong | |||
|UniProt=C9JP21 | |UniProt=C9JP21 | ||
|association_with_transcript=0bp_to_ENST00000440737,ENST00000493952_5end | |||
|cluster_id=chr3:18486354..18486377,- | |||
|coexpression_cluster_id=C712 | |||
|description=CAGE_peak_2_at_SATB1_5end | |||
|id=chr3:18486354..18486377,- | |||
|ontology_enrichment_celltype=CL:0000037!9.10e-36!172;CL:0000566!9.10e-36!172;CL:0000988!6.10e-33!182;CL:0002032!4.87e-32!165;CL:0000837!4.87e-32!165;CL:0000738!5.32e-28!140;CL:0002087!2.78e-23!119;CL:0002031!4.28e-22!124;CL:0000763!1.03e-16!112;CL:0000049!1.03e-16!112;CL:0000838!2.79e-15!52;CL:0000542!5.29e-15!53;CL:0000051!5.29e-15!53;CL:0000084!2.66e-14!25;CL:0000827!2.66e-14!25;CL:0000791!4.33e-12!18;CL:0000789!4.33e-12!18;CL:0002420!4.33e-12!18;CL:0002419!4.33e-12!18;CL:0000790!4.33e-12!18;CL:0000766!9.90e-12!76;CL:0000557!2.56e-09!71;CL:0000839!1.12e-08!70;CL:0000625!3.45e-08!11;CL:0002057!3.81e-08!42;CL:0002194!5.11e-08!63;CL:0000576!5.11e-08!63;CL:0000040!5.11e-08!63;CL:0000559!5.11e-08!63;CL:0002009!1.04e-07!65;CL:0000236!2.05e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000084;1.94e-17;25!CL:0000791;1.96e-14;18!CL:0000789;1.96e-14;18!CL:0002419;1.96e-14;18!CL:0000542;4.38e-12;53!CL:0000625;1.19e-09;11!CL:0002087;3.20e-09;104!CL:0000236;4.68e-08;13!CL:0000763;6.76e-08;100!CL:0000738;7.03e-08;136!CL:0000988;1.51e-07;177!CL:0000860;2.08e-07;33!CL:0002057;2.08e-07;33!CL:0000576;8.04e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.65e-42,168;CL:0000988,3.22e-40,177;CL:0002032,5.76e-38,161;CL:0000837,5.76e-38,161;CL:0000738,6.65e-33,136;CL:0002087,1.13e-27,115;CL:0002031,1.70e-26,120;CL:0000838,1.64e-19,52;CL:0000542,8.57e-19,53;CL:0000051,8.57e-19,53;CL:0000763,9.54e-19,108;CL:0000049,9.54e-19,108;CL:0000084,1.98e-17,25;CL:0000827,1.98e-17,25;CL:0000791,1.99e-14,18;CL:0000789,1.99e-14,18;CL:0002420,1.99e-14,18;CL:0002419,1.99e-14,18;CL:0000790,1.99e-14,18;CL:0000766,5.43e-13,72;CL:0000557,3.10e-10,67;CL:0000625,1.16e-09,11;CL:0000839,3.31e-09,66;CL:0002194,1.55e-08,59;CL:0000576,1.55e-08,59;CL:0000040,1.55e-08,59;CL:0000559,1.55e-08,59;CL:0000236,2.47e-08,14;CL:0002009,2.66e-08,61;CL:0000860,1.10e-07,42;CL:0002057,1.10e-07,42 | |||
|ontology_enrichment_development_v019=CL:0000790;1.96e-14;18!CL:0000051;4.38e-12;53 | |||
|ontology_enrichment_disease=DOID:1240!4.08e-10!39;DOID:2531!5.16e-10!51;DOID:0060083!5.16e-10!51;DOID:8692!7.24e-09!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.10e-10;31!DOID:1240;2.44e-09;39!DOID:2531;8.73e-09;51!DOID:0060083;8.73e-09;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.49e-12,51;DOID:0060083,1.49e-12,51;DOID:1240,5.65e-12,39;DOID:8692,7.10e-11,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!8.29e-15!102;UBERON:0003061!8.29e-15!102;UBERON:0007023!1.04e-12!115;UBERON:0002193!3.72e-12!112;UBERON:0000178!2.38e-08!15;UBERON:0000179!2.38e-08!15;UBERON:0000463!2.38e-08!15;UBERON:0002371!1.27e-07!80;UBERON:0001474!5.14e-07!86;UBERON:0002619!6.01e-07!22;UBERON:0001950!8.44e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;9.34e-10;15!UBERON:0000179;9.34e-10;15!UBERON:0000463;9.34e-10;15!UBERON:0002619;4.40e-08;22!UBERON:0001950;5.95e-08;20!UBERON:0002390;8.42e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.03e-17,98;UBERON:0003061,3.03e-17,98;UBERON:0002193,4.36e-15,108;UBERON:0000178,7.35e-10,15;UBERON:0000179,7.35e-10,15;UBERON:0000463,7.35e-10,15;UBERON:0007023,3.82e-09,114;UBERON:0002405,4.72e-09,93;UBERON:0002371,2.17e-08,76;UBERON:0002619,3.78e-08,22;UBERON:0001950,5.71e-08,20;UBERON:0001474,1.16e-07,82 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0.738726348460727,0.612002073732759,0.313454721478088,0.572471974262113,0.273748850145768,0,0.0764134057479513,0,0,12.5876568591649,13.8178583314997,6.81190942590734,0,0,0,1.16200800870452,0,13.7992206487378,8.30993112797816,8.02177789880567,9.54847831149748,1.79132379391939,7.12566065241755,2.06060454107349,3.05336301437086,3.77875943688809,2.18325655069035,4.88100977501938,5.75635043230556,5.57471467611186,3.45230870786581,2.56160706529101,0.709446689665756,11.3766074643084,10.3277549373412,6.77132432971709,8.28266293987461,8.18718450173537,2.02251136000576,8.26426509401437,10.269728866435,7.67204550958849,2.96866170168044,1.79517291859469,2.98357325372886,1.45104619314292,6.24123747160254,2.4912889959823,4.01997864410789,3.65038042894141,1.95469960234605,1.81619850790011,3.31449872388808,0.949387162322653,1.05627643155971,0.637812899895131,0,0.898629049171961,1.65194582125657,1.44653028027372,0,1.19350006319454,0.547992461293902,14.0796995569058,15.2918811153397,20.4587128388618,19.2028600154928,16.8166314555125,16.0930683187255,15.2040320740518,15.2648600725658,40.9833337758803,31.1235710366598,20.6427543187624,23.7908391442247,22.980851082243,13.1692042387539,50.1609913790274,42.0521516141606,34.335450332918,46.6450322139992,40.0884387959316,32.6678985956966,52.6032166701361,25.6244050835899,6.18672405697158,9.08288967792847,8.39491977671548,47.9061535774025,34.8559051460474,41.7672277693337,43.9396528279499,32.4579456023259,75.0330009600026,62.0694721168134,65.8573799971354,35.2392055789431,18.7778041864941,16.8377448286489,23.7838510498333,23.8924060743073,27.996588515826,17.1081368000707,40.5047070319209,37.7560502905534,33.7312961691334,23.6777252044017,20.5281999230262,26.4104833624399,18.988253900629,34.9026813357546,0,0,0,0,0,0,0,0,0,0,0.351339142772504,2.03017567021455,0,0,0.97364218096405,0.174129737299267,0.132957960518865,14.5479280826259,12.0118931263827,16.7155875598304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5424333948851,15.511210565933,0,0,0,0,0,0.354668382198357,0.560677600142307,0,0.24666754841716,0,0,0,0,0,0.234321431833797,0,0,0,0.23486899728753,0.161872944368132,0.140450806702248,0,0.491337269247072,0,0,0.741800787835671,0,0,0,0.125118519871964,0,0.877955241761676,0.612975591598039,0.45071417671979,0,0.717558542755448,0,0,0.300091096084402,0.206105058476878,0,0,0.168776332241266,0.194874010322397,0,0,0,0.355009592516614,0.10075209822764,0.169560592310488,0,0,0,2.6834215348511,1.45782745153634,1.16193942869518,1.55491582523056,2.27088765788066,1.82488679537915,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,9.71218818712231,0.245976877086227,0,0.219500570817251,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0,0.594524649154913,0.93733833986777,0,4.11147782002921,0,0,0,14.7798971368783,2.72950145441001,4.56121854189699,4.17947864909188,2.27236380167484,0,0.381988425558278,0,0,0,0,0,0,0.43596006883328,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,1.00451418286425,0,0.479249710983165,0,0,0.289562613335158,0,0,11.3205995433463,21.673383622212,22.4252677853898,20.2781997322002,1.52456774533478,2.60279707715243,0.773288812777695,1.84267891867784,0.637938751653163,7.49007023947182,2.99161459204025,7.45947924184864,0,0,0.271265023699736,0,0.178428988797162,0,0,0.300946099727719,2.27407504055985,0,0,0.184369168541703,0.173767228936166,0,0,40.1129970678402,29.5528455121505,24.6540658525956,0,0,0,0.496215615637554,0.153461973288062,0,0,0,0.160853921143607,0,0,0,0,0,0,0.120859449591622,0.200506470303285,0.0920809889358963,0,0,0.262248829918848,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0.261435451024901,1.79515087581472,0.656029291399411,0.325378394664303,1.13345112812495,0.915694648183434,1.48517099857058,0,0,0,0.386682873168488,0,0,0,0,0,0.0852266274161009,0.623224249527161,0,0,0,0.30347334256665,0.464845549297286,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0.179872457583315,0.274537029736055,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0,1.239293992399,0,0,0.0982490410131212,0,0.709522128141196,0.211107635297664,0,0,0.349934720244983,0,1.34060455107157,0,1.22386941009813,0.43050537267123,0,0.886860307073351,0.229723400206959,24.3574852431441,12.9988325214204,15.9501212408766,17.6291513838764,18.0999400157925,18.1572527133961,20.5211946150484,10.3106272918255,0,0.962479855263359,0.490080431962063,0.185803175125719,0.144269212976445,42.0448294189127,24.7110722729675,15.9663497146253,9.00075239622124,6.98522822988813,16.5557189540023,19.6558024679421,43.3645890163065,10.9675927041116,15.038068625404,16.4213024467555,0.963528450622197,26.8393610564093,23.4215430729679,15.1142351692536,54.6888560469055,48.0903631968694,58.8977470243037,12.8956142965347,0,22.1557318105882,3.51592382018778,38.3032763197493,7.04935025439248,0,0.293016358543788,0,0,0,0,0,0,2.98244294329889,1.1253553312841,2.67140892054974,13.3491138123675,0.844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| ||
|short_description=p2@SATB1 | |||
}} | }} |
Latest revision as of 03:18, 17 September 2015
Short description: | p2@SATB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SATB1_5end |
Coexpression cluster: | C712_thymus_biphenotypic_CD4_non_granulocyte_merkel_acute |
Association with transcript: | 0bp_to_ENST00000440737, ENST00000493952_5end |
EntrezGene: | SATB1 |
HGNC: | 10541 |
UniProt: | C9JP21 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.03e-17 | 98 |
blood island | 3.03e-17 | 98 |
hemolymphoid system | 4.36e-15 | 108 |
blood | 7.35e-10 | 15 |
haemolymphatic fluid | 7.35e-10 | 15 |
organism substance | 7.35e-10 | 15 |
adult organism | 3.82e-09 | 114 |
immune system | 4.72e-09 | 93 |
bone marrow | 2.17e-08 | 76 |
regional part of cerebral cortex | 3.78e-08 | 22 |
neocortex | 5.71e-08 | 20 |
bone element | 1.16e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.49e-12 | 51 |
immune system cancer | 1.49e-12 | 51 |
leukemia | 5.65e-12 | 39 |
myeloid leukemia | 7.10e-11 | 31 |