FFCP PHASE1:Hg19::chr3:159557637..159557641,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:159557637..159557641,+ to FFCP PHASE1:Hg19::chr3:159557637..159557641,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=29970 | |EntrezGene=29970 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15678 | |HGNC=15678 | ||
|TSSclassifier=strong | |||
|UniProt=Q9P0W5 | |UniProt=Q9P0W5 | ||
|association_with_transcript=-8bp_to_ENST00000445224,NM_001197109_5end | |||
|cluster_id=chr3:159557637..159557641,+ | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_35_at_SCHIP1_5end | |||
|id=chr3:159557637..159557641,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000123;2.97e-21;2!CL:0000242;2.97e-21;2!CL:0000037;2.96e-11;1!CL:0001024;2.96e-11;1!CL:0000312;4.58e-09;5!CL:0000240;1.08e-07;6!CL:0000311;1.08e-07;6!CL:0000079;1.08e-07;6!CL:0000237;1.08e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,1.53e-21,2;CL:0001024,3.63e-11,1;CL:0000312,3.53e-09,5;CL:0000240,8.66e-08,6;CL:0000311,8.66e-08,6;CL:0000079,8.66e-08,6;CL:0000237,8.66e-08,6;CL:0000036,8.66e-08,6;CL:0000357,8.66e-08,6;CL:0000114,8.66e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.18e-11;1!CL:0000357;1.08e-07;6!CL:0000114;1.08e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.91e-62!57;UBERON:0005068!4.91e-62!57;UBERON:0006241!4.91e-62!57;UBERON:0007135!4.91e-62!57;UBERON:0000073!3.07e-60!94;UBERON:0001016!3.07e-60!94;UBERON:0001017!9.13e-54!82;UBERON:0003075!7.42e-53!86;UBERON:0007284!7.42e-53!86;UBERON:0005743!2.44e-52!86;UBERON:0002616!3.88e-51!59;UBERON:0002780!4.54e-51!41;UBERON:0001890!4.54e-51!41;UBERON:0006240!4.54e-51!41;UBERON:0002346!1.01e-49!90;UBERON:0003080!1.39e-49!42;UBERON:0000955!6.91e-45!69;UBERON:0006238!6.91e-45!69;UBERON:0003056!9.32e-45!61;UBERON:0007023!1.66e-44!115;UBERON:0001893!3.47e-43!34;UBERON:0002020!1.03e-42!34;UBERON:0003528!1.03e-42!34;UBERON:0002791!2.09e-41!33;UBERON:0001869!1.09e-39!32;UBERON:0004121!5.71e-39!169;UBERON:0000924!1.40e-37!173;UBERON:0006601!1.40e-37!173;UBERON:0000033!9.74e-30!123;UBERON:0000956!7.20e-29!25;UBERON:0000203!7.20e-29!25;UBERON:0002619!8.04e-28!22;UBERON:0000153!1.37e-27!129;UBERON:0007811!1.37e-27!129;UBERON:0001950!2.32e-24!20;UBERON:0000483!1.47e-16!309;UBERON:0000025!1.79e-16!194;UBERON:0000119!3.41e-16!312;UBERON:0002308!2.07e-15!9;UBERON:0000125!2.07e-15!9;UBERON:0003076!2.87e-13!15;UBERON:0003057!2.87e-13!15;UBERON:0002420!1.72e-12!9;UBERON:0007245!1.72e-12!9;UBERON:0010009!1.72e-12!9;UBERON:0010011!1.72e-12!9;UBERON:0000454!1.72e-12!9;UBERON:0009663!1.81e-12!7;UBERON:0000477!2.51e-11!286;UBERON:0004111!2.98e-11!241;UBERON:0000200!3.32e-11!6;UBERON:0002298!4.81e-11!8;UBERON:0004732!1.28e-10!13;UBERON:0000064!2.96e-10!219;UBERON:0000475!8.14e-10!365;UBERON:0001894!4.06e-09!7;UBERON:0006222!4.06e-09!7;UBERON:0004733!4.60e-09!12;UBERON:0002028!4.60e-09!12;UBERON:0007277!4.60e-09!12;UBERON:0002021!6.46e-09!5;UBERON:0000922!9.56e-09!612;UBERON:0000010!1.26e-08!8;UBERON:0000923!3.19e-08!604;UBERON:0005291!3.19e-08!604;UBERON:0006598!3.19e-08!604;UBERON:0002532!3.19e-08!604;UBERON:0001871!3.42e-08!7;UBERON:0002050!3.63e-08!605;UBERON:0005423!3.63e-08!605;UBERON:0000467!4.66e-08!625;UBERON:0000480!5.30e-08!626;UBERON:0000369!2.09e-07!4;UBERON:0002435!2.09e-07!4;UBERON:0000204!2.09e-07!4;UBERON:0010082!2.09e-07!4;UBERON:0000488!3.30e-07!4;UBERON:0000468!3.58e-07!659;UBERON:0000481!4.05e-07!347;UBERON:0000349!9.52e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001954;2.97e-21;2!UBERON:0003022;2.97e-21;2!UBERON:0002421;2.97e-21;2!UBERON:0002600;2.97e-21;2!UBERON:0005162;3.83e-21;2!UBERON:0000122;3.83e-21;2!UBERON:0000349;1.06e-18;5!UBERON:0001893;1.62e-18;34!UBERON:0002420;7.91e-18;9!UBERON:0007245;7.91e-18;9!UBERON:0010009;7.91e-18;9!UBERON:0010011;7.91e-18;9!UBERON:0000454;7.91e-18;9!UBERON:0002780;1.94e-16;41!UBERON:0001890;1.94e-16;41!UBERON:0001869;1.03e-13;32!UBERON:0002791;1.20e-13;32!UBERON:0009663;2.54e-13;7!UBERON:0000073;3.69e-13;53!UBERON:0002616;3.69e-13;53!UBERON:0000941;1.18e-11;1!UBERON:0001785;1.18e-11;1!UBERON:0002464;1.18e-11;1!UBERON:0004904;1.18e-11;1!UBERON:0001021;1.18e-11;1!UBERON:0002336;2.96e-11;1!UBERON:0002038;2.96e-11;1!UBERON:0003112;2.96e-11;1!UBERON:0011215;2.96e-11;1!UBERON:0001018;2.96e-11;1!UBERON:0011158;2.96e-11;1!UBERON:0009661;2.96e-11;1!UBERON:0002950;2.96e-11;1!UBERON:0002473;2.96e-11;1!UBERON:0005340;2.96e-11;1!UBERON:0003544;2.96e-11;1!UBERON:0005970;2.96e-11;1!UBERON:0002316;2.96e-11;1!UBERON:0001020;2.96e-11;1!UBERON:0007190;2.96e-11;1!UBERON:0003128;2.96e-11;1!UBERON:0001891;2.96e-11;1!UBERON:0002437;2.96e-11;1!UBERON:0001703;2.96e-11;1!UBERON:0002241;2.96e-11;1!UBERON:0003528;6.99e-11;34!UBERON:0002020;6.99e-11;34!UBERON:0000125;1.74e-10;9!UBERON:0002308;1.74e-10;9!UBERON:0004732;1.68e-07;13!UBERON:0002619;3.01e-07;22!UBERON:0001016;9.98e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001893,6.49e-22,34;UBERON:0001954,5.76e-21,2;UBERON:0003022,5.76e-21,2;UBERON:0002421,5.76e-21,2;UBERON:0002600,5.76e-21,2;UBERON:0005162,7.05e-21,2;UBERON:0000122,7.05e-21,2;UBERON:0000073,1.09e-20,53;UBERON:0002616,1.09e-20,53;UBERON:0001049,1.62e-19,56;UBERON:0005068,1.62e-19,56;UBERON:0006241,1.62e-19,56;UBERON:0007135,1.62e-19,56;UBERON:0001016,4.37e-19,89;UBERON:0000349,1.03e-18,5;UBERON:0002420,3.92e-18,9;UBERON:0007245,3.92e-18,9;UBERON:0010009,3.92e-18,9;UBERON:0010011,3.92e-18,9;UBERON:0000454,3.92e-18,9;UBERON:0002780,4.50e-18,41;UBERON:0001890,4.50e-18,41;UBERON:0003080,4.50e-18,41;UBERON:0006240,4.50e-18,41;UBERON:0010371,1.45e-16,104;UBERON:0000955,1.35e-15,68;UBERON:0006238,1.35e-15,68;UBERON:0003075,1.64e-15,82;UBERON:0007284,1.64e-15,82;UBERON:0001017,1.89e-15,81;UBERON:0007023,5.21e-15,114;UBERON:0003056,9.68e-15,61;UBERON:0002346,1.03e-14,86;UBERON:0002791,2.88e-14,32;UBERON:0001869,2.94e-14,32;UBERON:0009663,1.74e-13,7;UBERON:0003528,2.06e-13,34;UBERON:0002020,2.06e-13,34;UBERON:0004121,2.61e-12,171;UBERON:0000924,2.61e-12,171;UBERON:0006601,2.61e-12,171;UBERON:0000941,1.06e-11,1;UBERON:0001785,1.06e-11,1;UBERON:0002464,1.06e-11,1;UBERON:0004904,1.06e-11,1;UBERON:0001021,1.06e-11,1;UBERON:0003902,1.06e-11,1;UBERON:0005425,1.06e-11,1;UBERON:0002038,2.18e-11,1;UBERON:0009661,2.18e-11,1;UBERON:0002950,2.18e-11,1;UBERON:0001891,2.18e-11,1;UBERON:0009616,2.18e-11,1;UBERON:0010286,2.18e-11,1;UBERON:0007190,2.42e-11,1;UBERON:0003112,4.91e-11,1;UBERON:0011158,4.91e-11,1;UBERON:0003128,4.91e-11,1;UBERON:0001703,4.91e-11,1;UBERON:0002241,4.91e-11,1;UBERON:0004761,4.91e-11,1;UBERON:0009617,4.91e-11,1;UBERON:0002336,6.00e-11,1;UBERON:0011215,6.00e-11,1;UBERON:0001018,6.00e-11,1;UBERON:0002473,6.00e-11,1;UBERON:0005340,6.00e-11,1;UBERON:0003544,6.00e-11,1;UBERON:0005970,6.00e-11,1;UBERON:0002316,6.00e-11,1;UBERON:0001020,6.00e-11,1;UBERON:0002437,6.00e-11,1;UBERON:0010314,1.17e-10,132;UBERON:0000125,1.30e-10,9;UBERON:0002308,1.30e-10,9;UBERON:0011216,1.55e-07,223;UBERON:0004732,1.64e-07,13;UBERON:0002619,2.99e-07,22 | |||
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| ||
|short_description=p35@SCHIP1 | |||
}} | }} |
Latest revision as of 09:34, 16 September 2015
Short description: | p35@SCHIP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_35_at_SCHIP1_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -8bp_to_ENST00000445224, NM_001197109_5end |
EntrezGene: | SCHIP1 |
HGNC: | 15678 |
UniProt: | Q9P0W5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 1.53e-21 | 2 |
CD34-positive, CD38-negative hematopoietic stem cell | 3.63e-11 | 1 |
keratinocyte | 3.53e-09 | 5 |
stratified squamous epithelial cell | 8.66e-08 | 6 |
keratin accumulating cell | 8.66e-08 | 6 |
stratified epithelial cell | 8.66e-08 | 6 |
keratinizing barrier epithelial cell | 8.66e-08 | 6 |
epithelial fate stem cell | 8.66e-08 | 6 |
stratified epithelial stem cell | 8.66e-08 | 6 |
surface ectodermal cell | 8.66e-08 | 6 |