FFCP PHASE1:Hg19::chr3:149688971..149688982,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:149688971..149688982,- to FFCP PHASE1:Hg19::chr3:149688971..149688982,-: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5217 | |EntrezGene=5217 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8882 | |HGNC=8882 | ||
|TSSclassifier=strong | |||
|UniProt=C9J712 | |UniProt=C9J712 | ||
|association_with_transcript=17bp_to_ENST00000498307_5end | |||
|cluster_id=chr3:149688971..149688982,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_3_at_PFN2_5end | |||
|id=chr3:149688971..149688982,- | |||
|ontology_enrichment_celltype=CL:0000055!1.22e-11!180;CL:0000133!1.46e-09!59;CL:0000221!8.81e-08!71;CL:0000333!8.61e-07!41 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000133,3.78e-09,59;CL:0000221,4.54e-07,72 | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.34e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.98e-29!94;UBERON:0001016!4.98e-29!94;UBERON:0000924!1.53e-27!173;UBERON:0006601!1.53e-27!173;UBERON:0000475!6.25e-27!365;UBERON:0004121!1.39e-26!169;UBERON:0001017!2.17e-25!82;UBERON:0005743!3.18e-25!86;UBERON:0002346!1.32e-22!90;UBERON:0000033!1.98e-22!123;UBERON:0001049!4.18e-22!57;UBERON:0005068!4.18e-22!57;UBERON:0006241!4.18e-22!57;UBERON:0007135!4.18e-22!57;UBERON:0000955!7.96e-22!69;UBERON:0006238!7.96e-22!69;UBERON:0003075!9.35e-22!86;UBERON:0007284!9.35e-22!86;UBERON:0000153!1.53e-20!129;UBERON:0007811!1.53e-20!129;UBERON:0000481!1.68e-20!347;UBERON:0002616!1.89e-20!59;UBERON:0000119!2.72e-18!312;UBERON:0002780!6.47e-18!41;UBERON:0001890!6.47e-18!41;UBERON:0006240!6.47e-18!41;UBERON:0000483!1.32e-17!309;UBERON:0003056!3.81e-17!61;UBERON:0003080!8.44e-17!42;UBERON:0001893!4.31e-16!34;UBERON:0001869!4.50e-16!32;UBERON:0002791!1.90e-15!33;UBERON:0002020!5.71e-15!34;UBERON:0003528!5.71e-15!34;UBERON:0000064!2.33e-13!219;UBERON:0000956!6.08e-13!25;UBERON:0000203!6.08e-13!25;UBERON:0000468!9.77e-13!659;UBERON:0002619!3.08e-12!22;UBERON:0000922!3.32e-12!612;UBERON:0001950!1.05e-11!20;UBERON:0002050!5.41e-11!605;UBERON:0005423!5.41e-11!605;UBERON:0000477!1.18e-10!286;UBERON:0000923!1.20e-10!604;UBERON:0005291!1.20e-10!604;UBERON:0006598!1.20e-10!604;UBERON:0002532!1.20e-10!604;UBERON:0000025!4.04e-10!194;UBERON:0004111!7.98e-10!241;UBERON:0000467!6.03e-09!625;UBERON:0000480!1.03e-08!626;UBERON:0000062!2.75e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.03e-15;32!UBERON:0001893;4.07e-15;34!UBERON:0002791;1.54e-14;32!UBERON:0003528;3.01e-14;34!UBERON:0002020;3.01e-14;34!UBERON:0000956;1.13e-13;25!UBERON:0000203;1.13e-13;25!UBERON:0002619;3.81e-13;22!UBERON:0002780;4.34e-13;41!UBERON:0001890;4.34e-13;41!UBERON:0000073;4.62e-13;53!UBERON:0002616;4.62e-13;53!UBERON:0001950;1.32e-12;20!UBERON:0001016;1.83e-11;83!UBERON:0000955;3.74e-11;68!UBERON:0001017;7.23e-11;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.35e-31,89;UBERON:0001017,4.08e-27,81;UBERON:0004121,4.30e-27,171;UBERON:0000924,4.30e-27,171;UBERON:0006601,4.30e-27,171;UBERON:0002346,6.39e-25,86;UBERON:0001049,2.18e-24,56;UBERON:0005068,2.18e-24,56;UBERON:0006241,2.18e-24,56;UBERON:0007135,2.18e-24,56;UBERON:0003075,5.04e-24,82;UBERON:0007284,5.04e-24,82;UBERON:0000955,2.59e-23,68;UBERON:0006238,2.59e-23,68;UBERON:0000073,4.22e-23,53;UBERON:0002616,4.22e-23,53;UBERON:0010314,8.33e-22,132;UBERON:0003056,7.32e-20,61;UBERON:0002780,1.01e-18,41;UBERON:0001890,1.01e-18,41;UBERON:0003080,1.01e-18,41;UBERON:0006240,1.01e-18,41;UBERON:0010371,3.77e-18,104;UBERON:0001893,4.29e-17,34;UBERON:0001869,4.49e-17,32;UBERON:0011216,2.17e-16,223;UBERON:0002791,6.33e-16,32;UBERON:0003528,6.79e-16,34;UBERON:0002020,6.79e-16,34;UBERON:0000119,2.49e-15,309;UBERON:0000483,1.12e-14,306;UBERON:0000956,9.99e-14,25;UBERON:0000203,9.99e-14,25;UBERON:0002619,5.66e-13,22;UBERON:0001950,2.10e-12,20;UBERON:0000922,2.46e-10,592;UBERON:0000025,1.54e-08,192;UBERON:0005423,2.50e-08,581;UBERON:0004111,7.85e-08,240;UBERON:0000923,2.60e-07,560;UBERON:0010316,2.60e-07,560;UBERON:0005291,2.60e-07,560;UBERON:0006598,2.60e-07,560;UBERON:0010317,2.60e-07,560;UBERON:0002532,2.60e-07,560;UBERON:0002050,4.06e-07,564;UBERON:0003076,6.86e-07,15;UBERON:0003057,6.86e-07,15 | |||
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| ||
|short_description=p3@PFN2 | |||
}} | }} |
Latest revision as of 22:59, 15 September 2015
Short description: | p3@PFN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PFN2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 17bp_to_ENST00000498307_5end |
EntrezGene: | PFN2 |
HGNC: | 8882 |
UniProt: | C9J712 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectodermal cell | 3.78e-09 | 59 |
ectodermal cell | 4.54e-07 | 72 |