FFCP PHASE1:Hg19::chr3:146262365..146262412,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:146262365..146262412,- to FFCP PHASE1:Hg19::chr3:146262365..146262412,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5359 | |EntrezGene=5359 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9092 | |HGNC=9092 | ||
|TSSclassifier=strong | |||
|UniProt=B4DTE8 | |UniProt=B4DTE8 | ||
|association_with_transcript=0bp_to_ENST00000448787,ENST00000494568_5end | |||
|cluster_id=chr3:146262365..146262412,- | |||
|coexpression_cluster_id=C413 | |||
|description=CAGE_peak_1_at_PLSCR1_5end | |||
|id=chr3:146262365..146262412,- | |||
|ontology_enrichment_celltype=CL:0002057!1.31e-21!42;CL:0000860!4.17e-21!45;CL:0000766!1.63e-16!76;CL:0002009!8.27e-16!65;CL:0002194!1.73e-15!63;CL:0000576!1.73e-15!63;CL:0000040!1.73e-15!63;CL:0000559!1.73e-15!63;CL:0000557!1.90e-14!71;CL:0000839!1.40e-13!70;CL:0000763!1.86e-12!112;CL:0000049!1.86e-12!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.58e-20;33!CL:0002057;7.58e-20;33!CL:0000473;5.63e-17;39!CL:0000234;5.63e-17;39!CL:0000576;3.68e-13;48!CL:0000766;1.14e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.83e-22,48;CL:0000234,3.83e-22,48;CL:0000860,1.31e-21,42;CL:0002057,1.31e-21,42;CL:0000766,3.90e-17,72;CL:0002009,1.59e-16,61;CL:0002194,3.23e-16,59;CL:0000576,3.23e-16,59;CL:0000040,3.23e-16,59;CL:0000559,3.23e-16,59;CL:0000557,5.05e-15,67;CL:0000839,4.02e-14,66;CL:0000763,1.03e-12,108;CL:0000049,1.03e-12,108 | |||
|ontology_enrichment_development_v019=CL:0002057;5.12e-16;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!2.21e-12!115;UBERON:0002371!1.79e-11!80;UBERON:0002193!2.61e-11!112;UBERON:0002390!3.87e-10!102;UBERON:0003061!3.87e-10!102;UBERON:0000062!4.55e-10!511;UBERON:0001474!7.47e-10!86;UBERON:0000926!2.04e-09!448;UBERON:0004120!2.04e-09!448;UBERON:0006603!2.04e-09!448;UBERON:0004765!1.33e-08!101;UBERON:0001434!1.33e-08!101;UBERON:0007023!7.79e-08!115;UBERON:0002050!9.04e-08!605;UBERON:0005423!9.04e-08!605;UBERON:0000923!1.04e-07!604;UBERON:0005291!1.04e-07!604;UBERON:0006598!1.04e-07!604;UBERON:0002532!1.04e-07!604;UBERON:0000467!1.35e-07!625;UBERON:0000480!2.35e-07!626;UBERON:0000922!3.38e-07!612;UBERON:0001007!9.24e-07!155;UBERON:0001555!9.24e-07!155;UBERON:0007026!9.24e-07!155 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,9.65e-13,93;UBERON:0002371,7.66e-12,76;UBERON:0002193,1.54e-11,108;UBERON:0004765,1.18e-10,90;UBERON:0002390,2.30e-10,98;UBERON:0003061,2.30e-10,98;UBERON:0001474,4.05e-10,82;UBERON:0001434,6.60e-09,100;UBERON:0007023,8.01e-08,114;UBERON:0005423,6.50e-07,581 | |||
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| ||
|short_description=p1@PLSCR1 | |||
}} | }} |
Latest revision as of 07:04, 25 September 2015
Short description: | p1@PLSCR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PLSCR1_5end |
Coexpression cluster: | C413_CD14_Smooth_gall_mesothelioma_meningioma_Fibroblast_Neutrophils |
Association with transcript: | 0bp_to_ENST00000448787, ENST00000494568_5end |
EntrezGene: | PLSCR1 |
HGNC: | 9092 |
UniProt: | B4DTE8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 3.83e-22 | 48 |
phagocyte | 3.83e-22 | 48 |
classical monocyte | 1.31e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.31e-21 | 42 |
myeloid leukocyte | 3.90e-17 | 72 |
macrophage dendritic cell progenitor | 1.59e-16 | 61 |
monopoietic cell | 3.23e-16 | 59 |
monocyte | 3.23e-16 | 59 |
monoblast | 3.23e-16 | 59 |
promonocyte | 3.23e-16 | 59 |
granulocyte monocyte progenitor cell | 5.05e-15 | 67 |
myeloid lineage restricted progenitor cell | 4.02e-14 | 66 |
myeloid cell | 1.03e-12 | 108 |
common myeloid progenitor | 1.03e-12 | 108 |
Ontology term | p-value | n |
---|---|---|
immune system | 9.65e-13 | 93 |
bone marrow | 7.66e-12 | 76 |
hemolymphoid system | 1.54e-11 | 108 |
skeletal element | 1.18e-10 | 90 |
hematopoietic system | 2.30e-10 | 98 |
blood island | 2.30e-10 | 98 |
bone element | 4.05e-10 | 82 |
skeletal system | 6.60e-09 | 100 |
adult organism | 8.01e-08 | 114 |
developing anatomical structure | 6.50e-07 | 581 |