FFCP PHASE1:Hg19::chr3:145968380..145968408,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:145968380..145968408,- to FFCP PHASE1:Hg19::chr3:145968380..145968408,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57088 | |EntrezGene=57088 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16497 | |HGNC=16497 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=242bp_to_NR_033439,uc010huy.2_5end | |||
|cluster_id=chr3:145968380..145968408,- | |||
|description=CAGE_peak_8_at_PLSCR4_5end | |||
|id=chr3:145968380..145968408,- | |||
|ontology_enrichment_celltype=CL:0002139!5.43e-09!24;CL:0005020!3.41e-08!6;CL:0002138!3.41e-08!6;CL:0005022!3.41e-08!6;CL:0002494!4.19e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0002138;1.98e-20;6!CL:0002144;2.35e-15;3!CL:0002139;6.91e-15;24!CL:0002078;1.28e-08;45!CL:0000115;2.10e-08;36!CL:0000746;2.38e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0005020,7.67e-21,6;CL:0002138,7.67e-21,6;CL:0005022,7.67e-21,6;CL:0002144,2.10e-15,3;CL:0002139,5.18e-15,24;CL:0000115,1.13e-11,36;CL:0002078,8.42e-11,45;CL:0000213,6.72e-08,58;CL:0000215,6.72e-08,58;CL:0000746,1.58e-07,3;CL:0000513,1.58e-07,3 | |||
|ontology_enrichment_development_v019=CL:0005022;1.98e-20;6!CL:0000513;2.38e-07;3!UBERON:0006241;4.32e-07;3!UBERON:0003057;4.32e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.49e-27!115;UBERON:0000477!5.57e-26!286;UBERON:0000025!1.57e-19!194;UBERON:0004111!1.75e-19!241;UBERON:0001049!4.68e-15!57;UBERON:0005068!4.68e-15!57;UBERON:0006241!4.68e-15!57;UBERON:0007135!4.68e-15!57;UBERON:0000483!5.01e-15!309;UBERON:0002616!5.74e-15!59;UBERON:0000119!1.45e-14!312;UBERON:0001017!1.34e-13!82;UBERON:0000955!3.64e-13!69;UBERON:0006238!3.64e-13!69;UBERON:0005743!4.24e-13!86;UBERON:0004872!1.16e-12!84;UBERON:0003075!1.30e-12!86;UBERON:0007284!1.30e-12!86;UBERON:0004535!1.35e-12!110;UBERON:0001009!1.65e-12!113;UBERON:0002346!2.94e-12!90;UBERON:0001893!1.24e-11!34;UBERON:0002780!2.17e-11!41;UBERON:0001890!2.17e-11!41;UBERON:0006240!2.17e-11!41;UBERON:0002020!2.54e-11!34;UBERON:0003528!2.54e-11!34;UBERON:0000468!3.57e-11!659;UBERON:0002049!4.43e-11!79;UBERON:0007798!4.43e-11!79;UBERON:0002791!6.05e-11!33;UBERON:0003080!6.36e-11!42;UBERON:0000073!1.46e-10!94;UBERON:0001016!1.46e-10!94;UBERON:0001869!3.19e-10!32;UBERON:0000055!4.08e-10!69;UBERON:0000467!7.88e-10!625;UBERON:0000480!9.78e-10!626;UBERON:0000481!1.74e-09!347;UBERON:0000948!6.52e-09!24;UBERON:0005498!6.52e-09!24;UBERON:0004140!6.52e-09!24;UBERON:0009881!6.52e-09!24;UBERON:0004141!6.52e-09!24;UBERON:0003084!6.52e-09!24;UBERON:0007005!6.52e-09!24;UBERON:0004139!6.52e-09!24;UBERON:0004291!6.52e-09!24;UBERON:0000153!8.24e-09!129;UBERON:0007811!8.24e-09!129;UBERON:0003914!9.83e-09!118;UBERON:0007100!2.23e-08!27;UBERON:0002619!3.16e-08!22;UBERON:0000033!6.16e-08!123;UBERON:0000475!8.87e-08!365;UBERON:0000922!2.46e-07!612;UBERON:0001981!2.63e-07!60;UBERON:0007500!2.63e-07!60;UBERON:0004537!2.63e-07!60;UBERON:0006965!2.63e-07!60;UBERON:0000923!4.29e-07!604;UBERON:0005291!4.29e-07!604;UBERON:0006598!4.29e-07!604;UBERON:0002532!4.29e-07!604;UBERON:0002050!5.16e-07!605;UBERON:0005423!5.16e-07!605;UBERON:0002420!5.26e-07!9;UBERON:0007245!5.26e-07!9;UBERON:0010009!5.26e-07!9;UBERON:0010011!5.26e-07!9;UBERON:0000454!5.26e-07!9;UBERON:0003103!6.36e-07!69;UBERON:0003056!9.08e-07!61;UBERON:0000062!9.20e-07!511;UBERON:0000956!9.77e-07!25;UBERON:0000203!9.77e-07!25;UBERON:0001950!9.82e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0010523;2.35e-15;3!UBERON:0001915;2.35e-15;3!UBERON:0001982;2.35e-15;3!UBERON:0001473;2.93e-15;8!UBERON:0004536;2.93e-15;8!UBERON:0006558;2.93e-15;8!UBERON:0002465;3.76e-12;10!UBERON:0000055;1.69e-07;65!UBERON:0001870;4.32e-07;3!UBERON:0002240;4.32e-07;3!UBERON:0005174;4.32e-07;3!UBERON:0001137;4.32e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,1.45e-15,8;UBERON:0004536,1.45e-15,8;UBERON:0006558,1.45e-15,8;UBERON:0010523,2.10e-15,3;UBERON:0001915,2.10e-15,3;UBERON:0001982,2.10e-15,3;UBERON:0004111,2.61e-13,240;UBERON:0002465,2.16e-12,10;UBERON:0000025,9.84e-12,192;UBERON:0000055,7.83e-11,68;UBERON:0002049,1.70e-10,78;UBERON:0007798,1.70e-10,78;UBERON:0004535,3.41e-10,109;UBERON:0001009,8.17e-10,112;UBERON:0010314,2.75e-07,132;UBERON:0001870,5.22e-07,3;UBERON:0002240,5.38e-07,3;UBERON:0005174,5.38e-07,3;UBERON:0001137,5.38e-07,3;UBERON:0003914,6.63e-07,117 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.140954404095971,0,0,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,1.79007586580942,0.361439152384566,0,0.144846518960824,0,0,0,0,0,0.785874452986276,0,0,0,0,0,0,0,0,0,0,0,1.13061588384802,0.419499436209906,0.550236083880135,0,0.775250277507987,1.77883131343355,4.35136796594071,2.41697590265488,1.52054421143703,3.90499292077071,0.735326160691737,0.81014194788176,0.535798369704479,0,0.112611480483322,0,0,0,0,0,0,0,0.12663051166458,0.794455084879313,1.72101972449288,0,0.560677600142307,0,0.24666754841716,3.11211035399766,0.538842688278752,0.980771418680752,0.756787138224657,1.15235184896,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0.150238058906597,1.02088964844019,0,0,0.211931901159562,0,0,0,0,0,0,0,0.460249493211497,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0.241011029883482,0,0,0,0.134831308160164,0,0,0,0,0,0,2.53510069643662,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.117408694235822,4.04226053731007,1.85194205030644,5.32711626256875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0.428933980974443,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0.239624855491583,0,0,0.289562613335158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0.178428988797162,0.315404830067869,0.117141414992713,0,0,1.03473071292505,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0.248107807818777,0,0.280660094433074,0.256278298511402,0.511707249066704,0.160853921143607,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0.15350367472613,0,0.107420244868274,0,0,0.0890320356467374,0,0,0,0,0,0,0,0.924100740528266,0,0,0.9266210955196,0.429374660225974,0,0.316379424718726,0.762520775695299,0,0,0,0,0.179872457583315,0,0,0,0,0.421258456238981,0,2.43713489631284,0,0,0.282810863907425,0,0,1.32687795048244,0.438450885253763,0,0.655894752046633,0,0,0.563391205064483,0,0,0.35667105148125,0,0.633322905892992,0.329294892959902,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0,0,0,0,1.9882952955326,0.422008249231538,0.111308705022906,0,0,2.39097585901284,0.276283915531148,0,0,0,0,0,0,0,0.197286811273867,0,0,0,1.02044907978036,0,0,0,0,0,0,0,0,0,0,0,2.41192877250816,0,0.663475559587348,0.886642856860642,0.658156191461918,0,0.139423744278603,0.307801034015188,0.455768223388005,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0.611030144933625,0,0,0,1.7524294574976,0.802577647298789,0,0,0,0,0,0,0,1.70603764996917,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,1.35588444468319,0,0,1.32952671507345,0,0,0.213452994739353,0,0,0,0.171594997861965,0,0,0,0,0.104602846312333,0.305994652908965,0,0.600420288709789,0.410716136675979,0,0.859530882839914,0,0.837847203816763,0.687481272035051,0,0,0.429226048136571,0,0.53746777989381,1.08089965062721,0,0,0,0,0,0,1.59045937961861,0.681017030557878,0,0,0,0,0,0.728994679896296,0,0.157611414598396,0.209818352539992,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0.646414781807753,0.39669780522807,0,0,0.427149650270779,1.72924735609633,0.828478110694391,0.496166021811951,0,0,0,0,0.2506898940227,0,0,0,0,0.122026264901963,1.251909307065,0,0.554645257684261,1.1177352529449,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0.50313580350515,0,0.686520205190771,0.302461847526478,0.310874401165561,0.295710299979268,0.63718706865481,0,0.621051827505038,0.829412415681711,0,0.521745061811734,0,0,0,0.363697318405119,0.214821114084977,0.464033759878494,0,0,0,0,0,0,1.07220795687463,0,0,0,0,0,0,0.438568099157414,0.176689145945881,0,0.675769762612291,0,0,0.303859956177382,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705351887381368,0.3062454773532,0.834979926253974,0,0.638535436228605,0.41023272848151,0,0.553258019713743,1.45328081068666,0,0,0.11796972334774,0,0,0,0,0,0.150420656698515,0,0,0,0.982631505060581,0,0.675375846183947,0,1.2401207790071,0.570742291745161,0,0,0.496211178389294,0.703484977438482,0,0,0.672567444437648,0,0.227662191351298,0.354809480650555,0,2.57232014156128,0.135939465953663,0.789273282754189,0,0,0.156986185701028,0.785577949580009,0,0,0,0,0.428859265059938,0,0.116241425368125,0,0,0,0,0,0.430227358820278,0,0,0.846774100381858,0.22910686854405,0,0,0,0,0,0,0,0,1.45713297917742,0,0,0,0,0,0,0.231522474323834,0.655678681511872,0,0.245148321753905,0,1.37415926980462,1.18818560130834,0.8453114551668,0,0.0939839179798536,0.386747327841463,0,0,0,0,0.730336388246517,0,0.430018749454354,0,0.203974470572744,0,1.5870805215462,0,0,0,0,0,0,0,0,0,0,0.303114792872958,0.535928260312357,0,0.82746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| ||
|short_description=p8@PLSCR4 | |||
}} | }} |
Latest revision as of 06:44, 25 September 2015
Short description: | p8@PLSCR4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_PLSCR4_5end |
Coexpression cluster: | NA |
Association with transcript: | 242bp_to_NR_033439, uc010huy.2_5end |
EntrezGene: | PLSCR4 |
HGNC: | 16497 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 7.67e-21 | 6 |
endothelial cell of lymphatic vessel | 7.67e-21 | 6 |
vascular lymphangioblast | 7.67e-21 | 6 |
capillary endothelial cell | 2.10e-15 | 3 |
endothelial cell of vascular tree | 5.18e-15 | 24 |
endothelial cell | 1.13e-11 | 36 |
meso-epithelial cell | 8.42e-11 | 45 |
lining cell | 6.72e-08 | 58 |
barrier cell | 6.72e-08 | 58 |
cardiac muscle cell | 1.58e-07 | 3 |
cardiac muscle myoblast | 1.58e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
lymphatic vessel | 1.45e-15 | 8 |
lymph vasculature | 1.45e-15 | 8 |
lymphatic part of lymphoid system | 1.45e-15 | 8 |
microcirculatory vessel | 2.10e-15 | 3 |
endothelium of capillary | 2.10e-15 | 3 |
capillary | 2.10e-15 | 3 |
anatomical conduit | 2.61e-13 | 240 |
lymphoid system | 2.16e-12 | 10 |
tube | 9.84e-12 | 192 |
vessel | 7.83e-11 | 68 |
vasculature | 1.70e-10 | 78 |
vascular system | 1.70e-10 | 78 |
cardiovascular system | 3.41e-10 | 109 |
circulatory system | 8.17e-10 | 112 |
structure with developmental contribution from neural crest | 2.75e-07 | 132 |
frontal cortex | 5.22e-07 | 3 |
spinal cord | 5.38e-07 | 3 |
dorsal region element | 5.38e-07 | 3 |
dorsum | 5.38e-07 | 3 |
epithelial tube | 6.63e-07 | 117 |