FFCP PHASE1:Hg19::chr3:13859846..13859848,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:13859846..13859848,- to FFCP PHASE1:Hg19::chr3:13859846..13859848,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:13859846..13859848,- | |||
|coexpression_cluster_id=C1269 | |||
|description=CAGE_peak_at_chr3:13859846..13859848,- | |||
|id=chr3:13859846..13859848,- | |||
|ontology_enrichment_celltype=CL:0002076!1.09e-10!43;CL:0002159!1.33e-10!13;CL:0000066!3.01e-09!254;CL:0002368!2.28e-08!13;CL:0000223!2.72e-08!59;CL:0000791!8.20e-08!18;CL:0000789!8.20e-08!18;CL:0002420!8.20e-08!18;CL:0002419!8.20e-08!18;CL:0000790!8.20e-08!18;CL:0000625!7.28e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0002159;2.25e-12;14!CL:0002368;8.27e-11;13!CL:0002076;9.30e-10;42!CL:0000244;4.91e-08;4!CL:0000731;4.91e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,2.27e-13,42;CL:0002159,2.54e-12,14;CL:0000066,8.16e-12,253;CL:0002368,9.45e-11,13;CL:0000223,1.03e-08,58;CL:0000244,4.93e-08,4;CL:0000731,4.93e-08,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!6.21e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.90e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.20e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000956!4.18e-10!25;UBERON:0000203!4.18e-10!25;UBERON:0001869!4.65e-10!32;UBERON:0001893!6.30e-10!34;UBERON:0002619!7.14e-10!22;UBERON:0002791!2.04e-09!33;UBERON:0001049!2.56e-09!57;UBERON:0005068!2.56e-09!57;UBERON:0006241!2.56e-09!57;UBERON:0007135!2.56e-09!57;UBERON:0001950!4.34e-09!20;UBERON:0002020!6.61e-09!34;UBERON:0003528!6.61e-09!34;UBERON:0002780!1.32e-08!41;UBERON:0001890!1.32e-08!41;UBERON:0006240!1.32e-08!41;UBERON:0003080!3.21e-08!42;UBERON:0000924!5.35e-08!173;UBERON:0006601!5.35e-08!173;UBERON:0000064!5.79e-08!219;UBERON:0001017!7.38e-08!82;UBERON:0004121!7.45e-08!169;UBERON:0002616!3.05e-07!59;UBERON:0005743!5.47e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;3.21e-09;5!UBERON:0000486;3.52e-08;12!UBERON:0005910;1.49e-07;6!UBERON:0005631;3.16e-07;10!UBERON:0000158;3.16e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,3.28e-09,5;UBERON:0005910,1.51e-07,6;UBERON:0005631,1.80e-07,14;UBERON:0000158,1.80e-07,14 | |||
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| ||
|short_description=p@chr3:13859846..13859848,- | |||
}} | }} |
Latest revision as of 16:17, 29 July 2015
Short description: | p@chr3:13859846..13859848, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:13859846..13859848, - |
Coexpression cluster: | C1269_serous_Urothelial_clear_Gingival_Renal_choriocarcinoma_Corneal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 2.27e-13 | 42 |
general ecto-epithelial cell | 2.54e-12 | 14 |
epithelial cell | 8.16e-12 | 253 |
respiratory epithelial cell | 9.45e-11 | 13 |
endodermal cell | 1.03e-08 | 58 |
transitional epithelial cell | 4.93e-08 | 4 |
urothelial cell | 4.93e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
urothelium | 3.28e-09 | 5 |
transitional epithelium | 1.51e-07 | 6 |
extraembryonic membrane | 1.80e-07 | 14 |
membranous layer | 1.80e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.20e-07 | 14 |