FFCP PHASE1:Hg19::chr3:135915058..135915069,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:135915058..135915069,- to FFCP PHASE1:Hg19::chr3:135915058..135915069,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55167 | |EntrezGene=55167 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25544 | |HGNC=25544 | ||
|TSSclassifier=strong | |||
|UniProt=C9IZG7 | |UniProt=C9IZG7 | ||
|association_with_transcript=99bp_to_ENST00000473093_5end | |||
|cluster_id=chr3:135915058..135915069,- | |||
|description=CAGE_peak_17_at_MSL2_5end | |||
|id=chr3:135915058..135915069,- | |||
|ontology_enrichment_celltype=CL:0000037!1.51e-22!172;CL:0000566!1.51e-22!172;CL:0000988!6.19e-21!182;CL:0002032!1.39e-19!165;CL:0000837!1.39e-19!165;CL:0000763!1.40e-12!112;CL:0000049!1.40e-12!112;CL:0000738!3.91e-11!140;CL:0002087!3.17e-09!119;CL:0002031!4.60e-09!124;CL:0000084!1.29e-07!25;CL:0000827!1.29e-07!25;CL:0000542!3.81e-07!53;CL:0000051!3.81e-07!53;CL:0000838!7.54e-07!52 | |||
|ontology_enrichment_celltype_v019=CL:0002032;7.45e-16;1!CL:0000557;7.45e-16;1!CL:0000771;2.23e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,7.74e-11,168;CL:0000988,3.19e-10,177;CL:0000763,1.20e-09,108;CL:0000049,1.20e-09,108;CL:0002032,2.11e-09,161;CL:0000837,2.11e-09,161;CL:0000771,2.00e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!1.68e-23!51;DOID:0060083!1.68e-23!51;DOID:1240!2.75e-21!39;DOID:8692!2.15e-16!31;DOID:162!1.88e-12!235;DOID:0050686!2.09e-12!137;DOID:14566!5.39e-12!239;DOID:1036!1.61e-07!8 | |||
|ontology_enrichment_disease_v019=DOID:1240;2.30e-17;39!DOID:2531;2.84e-16;51!DOID:0060083;2.84e-16;51!DOID:8692;3.16e-16;31 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,1.98e-22,39;DOID:2531,1.34e-21,51;DOID:0060083,1.34e-21,51;DOID:8692,3.69e-16,31;DOID:0050686,2.04e-07,137 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p17@MSL2 | |||
}} | }} |
Latest revision as of 23:39, 24 September 2015
Short description: | p17@MSL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_MSL2_5end |
Coexpression cluster: | NA |
Association with transcript: | 99bp_to_ENST00000473093_5end |
EntrezGene: | MSL2 |
HGNC: | 25544 |
UniProt: | C9IZG7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 7.74e-11 | 168 |
hematopoietic cell | 3.19e-10 | 177 |
myeloid cell | 1.20e-09 | 108 |
common myeloid progenitor | 1.20e-09 | 108 |
hematopoietic oligopotent progenitor cell | 2.11e-09 | 161 |
hematopoietic multipotent progenitor cell | 2.11e-09 | 161 |
eosinophil | 2.00e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
leukemia | 1.98e-22 | 39 |
hematologic cancer | 1.34e-21 | 51 |
immune system cancer | 1.34e-21 | 51 |
myeloid leukemia | 3.69e-16 | 31 |
organ system cancer | 2.04e-07 | 137 |