FFCP PHASE1:Hg19::chr3:131753790..131753801,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:131753790..131753801,- to FFCP PHASE1:Hg19::chr3:131753790..131753801,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=131034 | |EntrezGene=131034 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2317 | |HGNC=2317 | ||
|TSSclassifier=strong | |||
|UniProt=Q96A23 | |UniProt=Q96A23 | ||
|association_with_transcript=42bp_to_ENST00000429747,NM_130808_5end | |||
|cluster_id=chr3:131753790..131753801,- | |||
|coexpression_cluster_id=C90 | |||
|description=CAGE_peak_3_at_CPNE4_5end | |||
|id=chr3:131753790..131753801,- | |||
|ontology_enrichment_celltype=CL:0000047!2.48e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000047;1.29e-10;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.24e-14;82 | |||
|ontology_enrichment_disease=DOID:171!4.06e-13!10;DOID:3095!2.97e-12!22;DOID:2994!2.97e-12!22 | |||
|ontology_enrichment_disease_v019=DOID:171;6.69e-13;10!DOID:3095;8.82e-08;22!DOID:2994;8.82e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:171,6.70e-13,10;DOID:3095,8.82e-08,22;DOID:2994,8.82e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0001017!8.66e-52!82;UBERON:0000073!1.87e-51!94;UBERON:0001016!1.87e-51!94;UBERON:0005743!2.02e-50!86;UBERON:0001049!4.15e-50!57;UBERON:0005068!4.15e-50!57;UBERON:0006241!4.15e-50!57;UBERON:0007135!4.15e-50!57;UBERON:0002346!3.42e-48!90;UBERON:0003075!3.99e-42!86;UBERON:0007284!3.99e-42!86;UBERON:0002780!5.45e-42!41;UBERON:0001890!5.45e-42!41;UBERON:0006240!5.45e-42!41;UBERON:0002616!5.50e-41!59;UBERON:0000955!6.08e-41!69;UBERON:0006238!6.08e-41!69;UBERON:0003080!9.73e-41!42;UBERON:0001893!1.53e-40!34;UBERON:0001869!1.67e-40!32;UBERON:0002020!4.61e-40!34;UBERON:0003528!4.61e-40!34;UBERON:0002791!6.45e-39!33;UBERON:0003056!1.37e-37!61;UBERON:0000924!9.41e-34!173;UBERON:0006601!9.41e-34!173;UBERON:0000956!2.33e-33!25;UBERON:0000203!2.33e-33!25;UBERON:0002619!1.03e-32!22;UBERON:0001950!1.85e-29!20;UBERON:0004121!2.21e-29!169;UBERON:0000033!4.28e-27!123;UBERON:0000153!3.82e-26!129;UBERON:0007811!3.82e-26!129;UBERON:0007023!2.59e-25!115;UBERON:0000025!3.34e-13!194;UBERON:0000200!8.62e-12!6;UBERON:0001871!3.69e-11!7;UBERON:0003076!1.77e-10!15;UBERON:0003057!1.77e-10!15;UBERON:0002021!3.47e-10!5;UBERON:0000349!1.82e-09!5;UBERON:0004111!1.85e-09!241;UBERON:0000477!2.39e-09!286;UBERON:0002420!1.05e-08!9;UBERON:0007245!1.05e-08!9;UBERON:0010009!1.05e-08!9;UBERON:0010011!1.05e-08!9;UBERON:0000454!1.05e-08!9;UBERON:0000483!1.76e-08!309;UBERON:0002308!2.19e-08!9;UBERON:0000125!2.19e-08!9;UBERON:0000064!2.40e-08!219;UBERON:0000119!3.05e-08!312;UBERON:0000475!4.63e-08!365;UBERON:0000369!2.24e-07!4;UBERON:0002435!2.24e-07!4;UBERON:0000204!2.24e-07!4;UBERON:0010082!2.24e-07!4;UBERON:0000922!3.96e-07!612;UBERON:0004733!5.57e-07!12;UBERON:0002028!5.57e-07!12;UBERON:0007277!5.57e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.30e-71;22!UBERON:0001950;2.09e-70;20!UBERON:0000956;7.68e-63;25!UBERON:0000203;7.68e-63;25!UBERON:0001893;3.00e-58;34!UBERON:0001869;3.42e-57;32!UBERON:0002791;1.33e-53;32!UBERON:0003528;1.71e-48;34!UBERON:0002020;1.71e-48;34!UBERON:0002780;2.36e-43;41!UBERON:0001890;2.36e-43;41!UBERON:0000200;6.37e-29;6!UBERON:0000073;8.84e-29;53!UBERON:0002616;8.84e-29;53!UBERON:0002021;9.60e-25;5!UBERON:0001017;1.99e-24;75!UBERON:0000955;3.73e-22;68!UBERON:0002346;2.88e-21;4!UBERON:0000923;2.88e-21;4!UBERON:0010316;2.88e-21;4!UBERON:0005291;2.88e-21;4!UBERON:0001016;1.30e-19;83!UBERON:0002050;4.89e-17;5!UBERON:0005423;4.89e-17;5!UBERON:0001871;7.46e-17;6!UBERON:0001872;1.28e-15;5!UBERON:0001870;3.69e-15;3!UBERON:0002702;5.75e-11;2!UBERON:0002771;7.36e-11;2!UBERON:0000349;4.37e-09;5!UBERON:0011216;4.43e-09;132!UBERON:0007023;6.53e-09;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,1.34e-71,22;UBERON:0001950,2.19e-70,20;UBERON:0001893,3.85e-67,34;UBERON:0001869,1.79e-65,32;UBERON:0002780,2.65e-65,41;UBERON:0001890,2.65e-65,41;UBERON:0003080,2.65e-65,41;UBERON:0006240,2.65e-65,41;UBERON:0000956,7.87e-63,25;UBERON:0000203,7.87e-63,25;UBERON:0002791,1.72e-59,32;UBERON:0003528,8.21e-56,34;UBERON:0002020,8.21e-56,34;UBERON:0001017,3.52e-52,81;UBERON:0001049,1.28e-50,56;UBERON:0005068,1.28e-50,56;UBERON:0006241,1.28e-50,56;UBERON:0007135,1.28e-50,56;UBERON:0001016,8.16e-50,89;UBERON:0000073,1.59e-49,53;UBERON:0002616,1.59e-49,53;UBERON:0000955,1.91e-47,68;UBERON:0006238,1.91e-47,68;UBERON:0002346,2.17e-43,86;UBERON:0003056,2.12e-42,61;UBERON:0003075,6.45e-33,82;UBERON:0007284,6.45e-33,82;UBERON:0004121,8.84e-31,171;UBERON:0000924,8.84e-31,171;UBERON:0006601,8.84e-31,171;UBERON:0000200,6.39e-29,6;UBERON:0010371,8.72e-25,104;UBERON:0002021,1.29e-24,5;UBERON:0007023,2.50e-24,114;UBERON:0010314,4.99e-20,132;UBERON:0011216,1.13e-18,223;UBERON:0001871,8.41e-17,6;UBERON:0001872,1.26e-15,5;UBERON:0001870,2.50e-15,3;UBERON:0000025,5.68e-12,192;UBERON:0002702,5.21e-11,2;UBERON:0002771,7.36e-11,2;UBERON:0004111,2.76e-09,240;UBERON:0000349,5.24e-09,5 | |||
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|short_description=p3@CPNE4 | |||
}} | }} |
Latest revision as of 20:03, 24 September 2015
Short description: | p3@CPNE4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CPNE4_5end |
Coexpression cluster: | C90_neuroectodermal_peripheral_neuroepithelioma_neuroblastoma_carcinoid_parietal_putamen |
Association with transcript: | 42bp_to_ENST00000429747, NM_130808_5end |
EntrezGene: | CPNE4 |
HGNC: | 2317 |
UniProt: | Q96A23 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 6.70e-13 | 10 |
germ cell and embryonal cancer | 8.82e-08 | 22 |
germ cell cancer | 8.82e-08 | 22 |