FFCP PHASE1:Hg19::chr3:112738225..112738261,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:112738225..112738261,- to FFCP PHASE1:Hg19::chr3:112738225..112738261,-: NSchange) |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=25871 | |EntrezGene=25871 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24496 | |HGNC=24496 | ||
|TSSclassifier=strong | |||
|UniProt=C9J9E3 | |UniProt=C9J9E3 | ||
|association_with_transcript=-218bp_to_ENST00000472166_5end | |||
|cluster_id=chr3:112738225..112738261,- | |||
|description=CAGE_peak_4_at_C3orf17_5end | |||
|id=chr3:112738225..112738261,- | |||
|ontology_enrichment_celltype=CL:0000738!2.82e-16!140;CL:0000988!2.83e-11!182;CL:0000037!4.78e-11!172;CL:0000566!4.78e-11!172;CL:0002031!7.86e-11!124;CL:0002087!3.58e-10!119;CL:0002032!2.48e-09!165;CL:0000837!2.48e-09!165;CL:0000838!3.35e-08!52;CL:0000542!6.41e-08!53;CL:0000051!6.41e-08!53 | |||
|ontology_enrichment_celltype_v019=CL:0000094;8.56e-08;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.73e-19,136;CL:0000037,2.21e-13,168;CL:0000988,6.75e-13,177;CL:0002031,3.72e-12,120;CL:0002087,1.65e-11,115;CL:0002032,1.06e-10,161;CL:0000837,1.06e-10,161;CL:0000838,6.85e-09,52;CL:0000542,1.40e-08,53;CL:0000051,1.40e-08,53;CL:0000094,4.97e-08,8;CL:0000766,7.44e-08,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.40e-11!57;UBERON:0005068!6.40e-11!57;UBERON:0006241!6.40e-11!57;UBERON:0007135!6.40e-11!57;UBERON:0002616!1.33e-08!59;UBERON:0003080!1.73e-08!42;UBERON:0002780!3.87e-08!41;UBERON:0001890!3.87e-08!41;UBERON:0006240!3.87e-08!41;UBERON:0000955!1.03e-07!69;UBERON:0006238!1.03e-07!69;UBERON:0002346!1.92e-07!90;UBERON:0005743!2.02e-07!86;UBERON:0003075!2.15e-07!86;UBERON:0007284!2.15e-07!86;UBERON:0000073!4.11e-07!94;UBERON:0001016!4.11e-07!94;UBERON:0001017!4.15e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;1.93e-07;53!UBERON:0002616;1.93e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.44e-13,56;UBERON:0005068,3.44e-13,56;UBERON:0006241,3.44e-13,56;UBERON:0007135,3.44e-13,56;UBERON:0000073,2.49e-11,53;UBERON:0002616,2.49e-11,53;UBERON:0002780,1.31e-08,41;UBERON:0001890,1.31e-08,41;UBERON:0003080,1.31e-08,41;UBERON:0006240,1.31e-08,41;UBERON:0000955,2.36e-07,68;UBERON:0006238,2.36e-07,68;UBERON:0003075,3.72e-07,82;UBERON:0007284,3.72e-07,82;UBERON:0001016,5.82e-07,89 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0.845726424575827,1.0007329835313,0.893922188854576,0,0,0,0,0,0,0.218441372130172,0,0.37129905888014,0.331397375727916,0.672325146451775,0,0.730310090387373,0.487932798790507,0.123121058076788,0,0.313454721478088,0.572471974262113,0.273748850145768,0.125542639594803,1.14620108621927,0.985207073399349,2.04648031415566,5.50709987588466,3.45446458287491,3.40595471295367,0.919421224478927,0.30120591877825,0.369754010166788,0.542270404062111,1.27952309238679,1.17440175733939,1.66198622559563,3.60980005446255,3.68918480216948,0.447830948479849,0.647787332037959,0.257575567634187,0.145398238779565,0,0.242584061187816,0,1.23350366406548,1.85823822537062,0.28769239232215,0.768482119587302,1.18241114944293,2.41321976515633,1.93645405075148,4.06279459783025,0.188242339542605,0.818718450173537,1.12361742222542,0.918251677112708,2.24650318953266,3.19668562899521,0.329851300186716,0.598390972864896,0,2.03146467040009,4.53908179752912,2.4912889959823,0,1.0429658368404,0.434377689410233,1.21079900526674,3.68277635987565,5.06339819905415,0.422510572623884,0.637812899895131,0.628975936525128,0.336985893439485,0.150176892841506,0.32145117339416,0.285012743741249,0,0,1.75996244461323,0.546138611262131,0.889509253863555,0.853460445133014,0.400395987036012,3.4485146397269,0,1.90810750907073,2.27685187643779,2.93618594685469,1.52909291250092,3.96513985737078,2.24203425192614,0.263384084775077,4.91774425284583,2.35806457649499,4.31763147898969,0.167186495390678,0,1.4203434172042,1.94826728407911,0.222820913770347,0.589211814949674,1.32920336750173,0.270803863765016,0.25618263945135,0.520237390239513,0.164437904603676,0.276350017785848,0.579606171470105,0.889719378972363,1.07016331235885,0,0.113309342697566,1.91610246800961,1.03088233644789,0.759059076058509,1.59282707162048,0.651083453856419,0,0.903450714466637,0.511946444617674,1.24930726552346,0,0.821127996921047,8.87069670188823,6.95344509037119,4.77920532813237,0,0,0,0.361439152384566,0,0.434539556882471,0,0.486634870302636,0.850813354476611,0.665188192387692,0.702678285545008,1.70272798147026,0.364295288292542,0,0.649094787309367,0.348259474598534,0.26591592103773,2.38490624305342,1.14398982156026,1.11437250398869,0.39752481473341,0,0,0,0,0.275118041940067,0.417989933073621,0.258416759169329,0.35576626268671,0.33472061276467,0,0,0.488124115096339,0,0,0.267899184852239,0.44905874525234,0.112611480483322,0,0,0,2.63560834872127,3.87780264148325,0.436094052142534,0.496971951695318,0.25326102332916,1.72131935057184,1.14734648299525,0.354668382198357,0,0,0,1.24484414159907,0.538842688278752,0.163461903113459,0.151357427644931,0.576175924479999,0.234321431833797,0,0,0.298897361103602,0,0,0,0.408308342509787,0.122834317311768,0.723280468230358,1.18800285728205,0,0,0,0.505008341862199,0,0,0,0.30648779579902,0.150238058906597,0,0.358779271377724,0.85422955527427,0.211931901159562,1.20036438433761,0.206105058476878,0.772921620136887,0.37223371266318,0.675105328965065,0.194874010322397,0.252433774244115,0.276149695926898,0.484938170456436,0,0.201504196455281,0.169560592310488,0,0.272746120590835,0.573609190778008,0.487894824518382,0.132529768321485,0.464775771478074,0.621966330092223,0.252320850875628,0.36497735907583,0,0.643240938192885,0,2.3218396401599,0.721879481669586,0.236613600079688,0.337169380156203,0,0,0.217879444092406,0.237270619111097,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0.590789906681404,1.32438929824395,0.122988438543114,0,0,0,0.301586917234893,0.370353780634118,0,1.03993478527958,0,0.463721619900307,0.117408694235822,0.144366447761074,0,0,0,0,0.492434012174795,1.40402559083543,0.297262324577456,0,0.503946384596579,0.283550194484773,0.53735113621709,0.290633938513962,1.15014803749563,0.985326475791887,0.880484340132261,4.14656231081544,3.89123874225796,4.16600030307054,0.317489471460845,0,3.51652341630141,0,0.102827492703324,0.901029173531752,0.857479297891735,0.112131084345361,0.87192013766656,0,0.129271715757778,3.57656445851882,0,0.531876233169741,1.04007436911366,0.257207374262142,0,0.266422179016099,0.142977993658148,0.542621605391443,0.823240336780769,0,0,0.791951872933429,0.301439377059586,0,0.499864955910285,0,0,0,0,1.14861935834114,0,0.289562613335158,0.410952645100767,0.358121926479791,1.12085143993527,14.5802762549426,9.05635814409973,10.0107568298204,0,0,0.773288812777695,0.167516265334349,0,0,2.99161459204025,1.65766205374414,0.12269149171914,0,0,0.207970861530807,0.178428988797162,0.315404830067869,0.234282829985426,0.300946099727719,0,0,0,0,0.521301686808497,0.783204629850962,1.71571711905428,1.03384013061444,1.94142780736755,1.60091336705167,0.303127571446259,0,0.604780586659361,0.496215615637554,0.460385919864187,0,0.768834895534206,1.02341449813341,0.482561763430822,0,0,0,0.246381468041427,1.03850885836724,0.116210378459959,0.241718899183244,0.40101294060657,0.460404944679482,0.229628896329213,0.364182336013434,0.262248829918848,0.451199612907412,0.15403067420883,2.35304930753057,0,0,0,0.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| ||
|short_description=p4@C3orf17 | |||
}} | }} |
Latest revision as of 14:58, 19 September 2015
Short description: | p4@C3orf17 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_C3orf17_5end |
Coexpression cluster: | NA |
Association with transcript: | -218bp_to_ENST00000472166_5end |
EntrezGene: | C3orf17 |
HGNC: | 24496 |
UniProt: | C9J9E3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.73e-19 | 136 |
hematopoietic stem cell | 2.21e-13 | 168 |
hematopoietic cell | 6.75e-13 | 177 |
hematopoietic lineage restricted progenitor cell | 3.72e-12 | 120 |
nongranular leukocyte | 1.65e-11 | 115 |
hematopoietic oligopotent progenitor cell | 1.06e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.06e-10 | 161 |
lymphoid lineage restricted progenitor cell | 6.85e-09 | 52 |
lymphocyte | 1.40e-08 | 53 |
common lymphoid progenitor | 1.40e-08 | 53 |
granulocyte | 4.97e-08 | 8 |
myeloid leukocyte | 7.44e-08 | 72 |
Ontology term | p-value | n |
---|---|---|
neural tube | 3.44e-13 | 56 |
neural rod | 3.44e-13 | 56 |
future spinal cord | 3.44e-13 | 56 |
neural keel | 3.44e-13 | 56 |
regional part of nervous system | 2.49e-11 | 53 |
regional part of brain | 2.49e-11 | 53 |
regional part of forebrain | 1.31e-08 | 41 |
forebrain | 1.31e-08 | 41 |
anterior neural tube | 1.31e-08 | 41 |
future forebrain | 1.31e-08 | 41 |
brain | 2.36e-07 | 68 |
future brain | 2.36e-07 | 68 |
neural plate | 3.72e-07 | 82 |
presumptive neural plate | 3.72e-07 | 82 |
nervous system | 5.82e-07 | 89 |