FFCP PHASE1:Hg19::chr3:112359550..112359569,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:112359550..112359569,- to FFCP PHASE1:Hg19::chr3:112359550..112359569,-: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=151887 | |EntrezGene=151887 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30649 | |HGNC=30649 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=333bp_to_ENST00000475181_5end | |||
|cluster_id=chr3:112359550..112359569,- | |||
|coexpression_cluster_id=C333 | |||
|description=CAGE_peak_7_at_CCDC80_5end | |||
|id=chr3:112359550..112359569,- | |||
|ontology_enrichment_celltype=CL:0000055!1.51e-25!180;CL:0000680!3.68e-17!57;CL:0000056!3.68e-17!57;CL:0000355!3.68e-17!57;CL:0000187!5.90e-16!54;CL:0000359!6.70e-15!32;CL:0000192!1.19e-14!42;CL:0000514!1.19e-14!42;CL:0000057!1.80e-14!75;CL:0000183!1.37e-13!59;CL:0000393!2.91e-13!60;CL:0000211!2.91e-13!60;CL:0002494!2.11e-11!16;CL:0000222!3.65e-10!119;CL:0000136!1.04e-07!15;CL:0002334!1.77e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002494;6.20e-16;16!CL:0000359;9.41e-15;32!CL:0000192;4.51e-11;43!CL:0000136;1.73e-09;13!CL:0002334;3.55e-09;12!CL:0000187;2.58e-07;55!CL:0000393;4.95e-07;61!CL:0000211;4.95e-07;61!CL:0002548;7.45e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,3.10e-16,32;CL:0002494,5.07e-16,16;CL:0000680,7.37e-16,58;CL:0000056,7.37e-16,58;CL:0000355,7.37e-16,58;CL:0000057,1.37e-15,76;CL:0000192,3.18e-15,43;CL:0000514,3.18e-15,43;CL:0000187,2.78e-14,55;CL:0000048,3.68e-12,427;CL:0000393,8.32e-12,61;CL:0000211,8.32e-12,61;CL:0000723,1.69e-11,433;CL:0000136,6.25e-11,15;CL:0000034,1.18e-10,441;CL:0002334,3.13e-09,12;CL:0000222,6.54e-09,121;CL:0002548,6.96e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000514;4.51e-11;43!CL:0000355;2.59e-08;58 | |||
|ontology_enrichment_disease=DOID:2394!2.67e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!6.40e-22!84;UBERON:0002385!9.15e-18!63;UBERON:0001015!9.15e-18!63;UBERON:0000383!9.15e-18!63;UBERON:0007100!1.15e-17!27;UBERON:0001134!2.17e-17!61;UBERON:0002036!2.17e-17!61;UBERON:0003082!2.17e-17!61;UBERON:0000948!9.19e-17!24;UBERON:0005498!9.19e-17!24;UBERON:0004140!9.19e-17!24;UBERON:0009881!9.19e-17!24;UBERON:0004141!9.19e-17!24;UBERON:0003084!9.19e-17!24;UBERON:0007005!9.19e-17!24;UBERON:0004139!9.19e-17!24;UBERON:0004291!9.19e-17!24;UBERON:0001009!2.20e-16!113;UBERON:0004290!3.35e-16!70;UBERON:0004535!2.00e-15!110;UBERON:0002049!4.72e-14!79;UBERON:0007798!4.72e-14!79;UBERON:0000914!5.68e-14!83;UBERON:0002329!5.68e-14!83;UBERON:0003077!5.68e-14!83;UBERON:0003059!5.68e-14!83;UBERON:0007282!5.68e-14!83;UBERON:0009618!5.68e-14!83;UBERON:0007285!5.68e-14!83;UBERON:0000486!1.74e-13!82;UBERON:0003914!6.94e-13!118;UBERON:0001981!1.21e-12!60;UBERON:0007500!1.21e-12!60;UBERON:0004537!1.21e-12!60;UBERON:0006965!1.21e-12!60;UBERON:0000055!2.19e-12!69;UBERON:0001637!1.43e-11!42;UBERON:0003509!1.43e-11!42;UBERON:0004572!1.43e-11!42;UBERON:0000490!1.08e-10!138;UBERON:0005256!1.92e-10!143;UBERON:0004573!7.51e-10!33;UBERON:0004571!7.51e-10!33;UBERON:0002100!2.57e-07!216;UBERON:0000119!3.03e-07!312;UBERON:0000483!7.16e-07!309;UBERON:0004923!7.81e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.03e-21;25!UBERON:0000948;1.10e-21;22!UBERON:0001637;3.11e-09;42!UBERON:0003509;3.11e-09;42!UBERON:0004572;3.11e-09;42!UBERON:0004573;1.13e-08;33!UBERON:0004571;1.13e-08;33!UBERON:0003688;1.51e-08;6!UBERON:0002358;1.51e-08;6!UBERON:0003684;1.51e-08;6!UBERON:0001178;1.51e-08;6!UBERON:0004457;1.60e-08;9!UBERON:0000042;1.60e-08;9!UBERON:0007500;5.90e-07;56!UBERON:0001981;5.90e-07;56!UBERON:0004537;5.90e-07;56 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,5.13e-25,83;UBERON:0000948,6.51e-24,24;UBERON:0005498,6.51e-24,24;UBERON:0004140,6.51e-24,24;UBERON:0009881,6.51e-24,24;UBERON:0004141,6.51e-24,24;UBERON:0003084,6.51e-24,24;UBERON:0007005,6.51e-24,24;UBERON:0004139,6.51e-24,24;UBERON:0004291,6.51e-24,24;UBERON:0007100,6.82e-24,27;UBERON:0003914,1.18e-18,117;UBERON:0001009,1.34e-17,112;UBERON:0004535,6.69e-17,109;UBERON:0002385,3.48e-16,64;UBERON:0001015,3.48e-16,64;UBERON:0000383,3.48e-16,64;UBERON:0001134,3.97e-16,62;UBERON:0002036,3.97e-16,62;UBERON:0003082,3.97e-16,62;UBERON:0007500,1.36e-14,59;UBERON:0001981,1.36e-14,59;UBERON:0004537,1.36e-14,59;UBERON:0006965,1.36e-14,59;UBERON:0007524,3.21e-14,73;UBERON:0002329,4.76e-14,71;UBERON:0003059,4.76e-14,71;UBERON:0007282,4.76e-14,71;UBERON:0004290,4.76e-14,71;UBERON:0009618,4.76e-14,71;UBERON:0003077,1.12e-13,72;UBERON:0007285,1.12e-13,72;UBERON:0005256,1.49e-13,122;UBERON:0001637,3.27e-13,42;UBERON:0003509,3.27e-13,42;UBERON:0004572,3.27e-13,42;UBERON:0000486,1.79e-12,83;UBERON:0000926,3.53e-12,315;UBERON:0004120,3.53e-12,315;UBERON:0006603,3.53e-12,315;UBERON:0002049,6.09e-12,78;UBERON:0007798,6.09e-12,78;UBERON:0000055,6.40e-12,68;UBERON:0007503,1.15e-11,78;UBERON:0003104,3.32e-11,160;UBERON:0009142,3.32e-11,160;UBERON:0004573,5.39e-10,33;UBERON:0004571,5.39e-10,33;UBERON:0004797,9.05e-10,7;UBERON:0002100,1.32e-09,199;UBERON:0000490,4.05e-09,148;UBERON:0003688,1.55e-08,6;UBERON:0002358,1.55e-08,6;UBERON:0003684,1.55e-08,6;UBERON:0001178,1.55e-08,6;UBERON:0003103,4.25e-07,68 | |||
|phase1_expression=13.6258784452917,6.63711624062048,67.7990683701621,10.007329835313,31.2872766099101,69.7870819280295,2.53299878168311,1.89515962028049,1.04474251279935,0,0,0.655324116390517,1.58260186937072,0.74259811776028,0.662794751455832,0.672325146451775,0.602694528023977,0.730310090387373,1.95173119516203,0.61560529038394,0.204000691244253,0,0,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,85.3324032098866,24.1452309493309,66.8721198441664,0.722878304769133,3.50936537445123,3.0417768981773,0,4.37971383272372,0.0945348171640679,0.443458794925128,0.614843499851882,0.523916301990851,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0.258416759169329,0,0,0.402829317109147,0,1.22031028774085,0,0,0.267899184852239,0,0,0,0,0,0,0,0,31.3092329568051,76.6114595570708,51.5071713363421,141.123617408416,19.5067610209096,42.050820010673,5.33744978648525,15.0467204534468,47.6152884161642,1.34710672069688,3.92308567472301,0.454072282934794,2.30470369792,0.234321431833797,0,0,0.149448680551801,0.117434498643765,0.161872944368132,0.140450806702248,0.408308342509787,0,0,0,0,0.910161361938026,0.718618141816238,0.168336113954066,0,0,0,0.919463387397059,0.300476117813194,11.002921766522,1.61450672119976,3.41691822109708,4.66250182551036,5.40163972951924,2.88547081867629,4.12224864073007,1.48893485065272,9.11392194102838,5.84622030967192,0.757301322732344,2.30124746605748,1.93975268182574,5.68015348026583,2.41805035746337,3.39121184620975,0,0,0,0.121973706129595,0,0.813357600086629,0.310983165046111,0.504641701751257,0,0,1.28648187638577,1.38134921352481,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,10.289350283285,8.82052268313252,0,0,0,0,0.122988438543114,1.20097467208968,0,0,0,0,0,0,0,0.115930404975077,15.3805389448926,0.288732895522148,0.925971025153221,1.52203321787679,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0.448524337381443,0.87192013766656,0.66004457238855,81.6997243589155,0,0,0.797814349754612,0,0.257207374262142,0,0.266422179016099,6.0050757336422,0.542621605391443,9.05564370458846,0.325736184293735,2.84313558994037,1.58390374586686,2.71295439353627,8.71533458600294,3.59902768255405,0,0,0,4.0736225433569,0,0,5.35690834670043,1.43833425785268,1.25342674267927,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0.736148950314839,0.500170521059677,0,0.831883446123229,1.07057393278297,0.946214490203608,1.40569697991256,3.61135319673263,2.27407504055985,1.03473071292505,1.99267679560631,1.47495334833363,0.521301686808497,0.195801157462741,0,0,0,0,0,3.32870879020994,0.907170879989041,44.1631897917423,22.5589100733452,17.1202657604175,159.148823375581,43.4951161706698,172.11369562366,57.8830459135465,0.925258162815933,14.027376299737,2.54594183642808,0,1.51073491997947,0,0,0.0920809889358963,14.6962493650697,1.0925470080403,2.75361271414791,0,0,0,0,0,0,0,0.431831832204279,0,0,0,0,0,0,0,0,0.256450125116389,4.92021968549559,2.27764876265012,0.412164046590889,0.183138929636687,0,0,0,25.7094287750655,0.386682873168488,0.154048617114644,0.307007349452259,0,0.322260734604821,0.435050081742686,0.255679882248303,2.67096106940212,0,0,0,0,5.57814659156743,125.924938732256,0,11.3972424665153,8.51689648507235,1.73986598415015,3.33583594387056,13.1674895802632,0,4.74569137078089,5.90953601163857,0.511795582622668,1.28381696410176,4.45484547096312,0.78494864019923,1.2591072030832,1.64722217841633,0.589062011728432,9.90694159709249,3.17020642346017,2.94880919367287,0.48763373908959,7.7988316682011,1.05650146756755,3.68549760801562,13.8577323314639,21.4715421578461,0.551365343546124,8.62470667813585,4.38450885253763,0,0,48.0897593401609,3.40805847909725,19.1553009721924,10.4690287108958,43.0330799637471,42.0871840747875,0,3.16661452946496,3.62224382255892,0.379473173765715,0,0,0.670302275535787,0,0.941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0.47748896947538,0.296964680832639,0,0,0.140669416410513,1.33570446027487,0,0.211125408127993,5.37969568277888,0.552567831062295,0,0,0,6.53183134089796,0,0,0,2.46608514092334,0,1.11136990144637,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0.769502585037971,1.59518878185802,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0.432777279484182,0,0.530745387020035,0.611030144933625,0,0,0,0.202203398942031,20.0644411824697,0,0,0,0,0.394584402849391,0,0,8.46700167021739,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.69647365264322,1.39781334593624,0.859930162358083,0,0,0,0.581934098930517,0,0.451961481561065,0,0,0.0633107959558787,0,0.400794101257669,1.49417096317547,0.19980960958213,0,0,0,0.14405479798815,0.49701014226173,0,0,0,0.305994652908965,0.577901179803038,0,0,0,4.29765441419957,0,160.587380731546,26.5826091853553,27.2791749339189,0.599037001496973,2.5753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| 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| ||
|short_description=p7@CCDC80 | |||
}} | }} |
Latest revision as of 14:32, 19 September 2015
Short description: | p7@CCDC80 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_CCDC80_5end |
Coexpression cluster: | C333_Fibroblast_Smooth_Preadipocyte_Adipocyte_Ewing_Placental_sacrococcigeal |
Association with transcript: | 333bp_to_ENST00000475181_5end |
EntrezGene: | CCDC80 |
HGNC: | 30649 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 3.10e-16 | 32 |
cardiocyte | 5.07e-16 | 16 |
muscle precursor cell | 7.37e-16 | 58 |
myoblast | 7.37e-16 | 58 |
multi-potent skeletal muscle stem cell | 7.37e-16 | 58 |
fibroblast | 1.37e-15 | 76 |
smooth muscle cell | 3.18e-15 | 43 |
smooth muscle myoblast | 3.18e-15 | 43 |
muscle cell | 2.78e-14 | 55 |
multi fate stem cell | 3.68e-12 | 427 |
electrically responsive cell | 8.32e-12 | 61 |
electrically active cell | 8.32e-12 | 61 |
somatic stem cell | 1.69e-11 | 433 |
fat cell | 6.25e-11 | 15 |
stem cell | 1.18e-10 | 441 |
preadipocyte | 3.13e-09 | 12 |
mesodermal cell | 6.54e-09 | 121 |
cardiac fibroblast | 6.96e-07 | 6 |