FFCP PHASE1:Hg19::chr2:9126333..9126337,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:9126333..9126337,- to FFCP PHASE1:Hg19::chr2:9126333..9126337,-: NSchange) |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:9126333..9126337,- | |||
|description=CAGE_peak_at_chr2:9126333..9126337,- | |||
|id=chr2:9126333..9126337,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000775;4.05e-25;3!CL:0000094;4.73e-10;8!CL:0000081;1.49e-07;11!CL:0000322;2.71e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,2.99e-25,3;CL:0000094,4.22e-10,8;CL:0000763,7.59e-08,108;CL:0000049,7.59e-08,108;CL:0000081,1.37e-07,11;CL:0000322,3.35e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.97e-19;1!UBERON:0003056;2.71e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1036;1.79e-36;8!DOID:8692;3.51e-15;31!DOID:1240;1.12e-11;39!DOID:3910;2.60e-10;2!DOID:2531;3.92e-08;51!DOID:0060083;3.92e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,1.14e-36,8;DOID:8692,9.44e-15,31;DOID:1240,9.53e-12,39;DOID:3910,3.58e-10,2;DOID:2531,5.37e-09,51;DOID:0060083,5.37e-09,51 | |||
|ontology_enrichment_uberon=UBERON:0000073!5.92e-09!94;UBERON:0001016!5.92e-09!94;UBERON:0001017!2.28e-07!82;UBERON:0000955!4.70e-07!69;UBERON:0006238!4.70e-07!69;UBERON:0005743!5.27e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;2.97e-19;1!UBERON:0001785;2.97e-19;1!UBERON:0002464;2.97e-19;1!UBERON:0004904;2.97e-19;1!UBERON:0001021;2.97e-19;1!UBERON:0004903;2.60e-10;2!UBERON:0003714;2.60e-10;2!UBERON:0005162;2.60e-10;2!UBERON:0000122;2.60e-10;2!UBERON:0002173;2.60e-10;2!UBERON:0002186;2.60e-10;2!UBERON:0004821;2.71e-07;3!UBERON:0007499;2.71e-07;3!UBERON:0003215;2.71e-07;3!UBERON:0010368;2.71e-07;3!UBERON:0009911;2.71e-07;3!UBERON:0002299;2.71e-07;3!UBERON:0006524;2.71e-07;3!UBERON:0008874;2.71e-07;3!UBERON:0002169;2.71e-07;3!UBERON:0004894;2.71e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,2.71e-19,1;UBERON:0001785,2.71e-19,1;UBERON:0002464,2.71e-19,1;UBERON:0004904,2.71e-19,1;UBERON:0001021,2.71e-19,1;UBERON:0003902,2.71e-19,1;UBERON:0005425,2.71e-19,1;UBERON:0003714,2.49e-10,2;UBERON:0005162,2.49e-10,2;UBERON:0000122,2.49e-10,2;UBERON:0004903,3.58e-10,2;UBERON:0002173,3.58e-10,2;UBERON:0002186,3.58e-10,2;UBERON:0004821,3.35e-07,3;UBERON:0003215,3.35e-07,3;UBERON:0010368,3.35e-07,3;UBERON:0009911,3.35e-07,3;UBERON:0002299,3.35e-07,3;UBERON:0006524,3.35e-07,3;UBERON:0008874,3.35e-07,3;UBERON:0002169,3.35e-07,3;UBERON:0004894,3.35e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376627918784408,0,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0.369754010166788,0.0774672005803016,0.284338464974843,0,0,0.200544447470142,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0.16072558669708,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0.786021525498329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0.144824403882799,0,0,0,0,0,0,0.795285947051099,0,0.189069634328136,0.221729397462564,0.087834785693126,0,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0,0,0,0,0,0,0,0.993943903390637,0,0,0,0,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0.298897361103602,0,0.161872944368132,0,0,0.245668634623536,0,0,0,0,0,0.336672227908132,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0.257640540045629,0,0,0,0.252433774244115,0,0.323292113637624,0,0,0,0.386521706326594,0,0,0.121973706129595,0,0,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0.26593811658487,0,0.257207374262142,0,0,0,0,0,0,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0.254094624222463,0,0,0,0.637938751653163,1.49801404789436,2.99161459204025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0,0,0,0,0.496215615637554,0.153461973288062,0.280660094433074,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0.219259876645935,0.784306353074702,0,0,0,0,0.0915694648183434,0.165018999841176,0,0,0,0.096670718292122,0.462145851343933,0,0.137836572484531,0.107420244868274,0.145016693914229,0.0852266274161009,0,0.165284915360978,0.192190067365106,0.382838137483752,0,0,0.31481234683064,0,0.308033580176089,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.714695326373367,0.411362273086194,0,0,0,0.106824071127473,0,0,0,0,0.142283686696828,0.159426272728822,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0.556812347790485,0,0,0,1.4098700508785,0,0.146508179271894,0.121360521749513,0,0,0.23874448473769,0,0.307160702099232,0,0.422008249231538,0.333926115068718,0,0.211125408127993,0,0.276283915531148,0,0.306806047506464,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0.437299999980979,0,0.1137934482855,1.01701460117107,0,0.344743373241465,0,0,0,0,0,0.110579259931225,0,0.219385397153973,0,0.278847488557207,0.0769502585037971,0,0,0.179515288819544,0.217294743844016,0,0,0,0,0,0.332423363800313,1.80476528493745,2.15668787749514,2.85296697858933,1.89753732724185,0.317873157960757,0,0,0,0,0,0,1.22206028986725,0,0.123563938946503,0.104421949505455,0.134802265961354,0,0.234264445725339,0,0,0.242780379534093,0,0,0,0.063186579628488,0.300646838828985,0.103688191397247,0,0,0,1.19472429772959,0,0,0,0.489961987071888,0.522355239482415,0,0.343972064943233,0,0,0,0,0,0,0.274083849293502,0,0,0,0,0,0,0,0.114536596165916,0.171594997861965,0,0.124252535565433,0,0,0.209205692624666,0.101998217636322,0.288950589901519,0,0.821432273351958,0,0.429765441419957,0,0,0,0,0,0,0,0.268733889946905,0.360299883542404,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.121499113316049,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.82092520749339,0,0.113312091520126,0,0,0.129282956361551,0.52893040697076,0,0,0.106787412567695,0.943225830597996,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0.500763722825999,0.573409195690071,0.332787154610557,0.0620964029413835,0.138348634936231,0,0,0,0.235265819698172,0,0.144921028610825,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0.226705925512272,0,0.244736704506468,0,0,0,0.353378291891762,0.192914038270915,0,0,0,0,0.553033744606923,0.194860308839388,0.132864840313363,0,0,0,0.211312123358627,0,0,0,0.567515953566836,0,0.139879507719444,0,0.639471856518258,0,0.157265941855896,0.54604819096007,0,0.212574920101683,0.247871528518004,0,0.318004350653419,0.0788617450012534,0,0,0,0.0642292250964595,0,0.319267718114302,0,0,0,0.484426936895553,1.42769420259154,0.0981477185010256,0,0,0,0,0,0,0,0.20170506870352,0,0.261906694481422,0,0.147856086217045,0.0675375846183947,0.781078098613847,0,0.253663240775627,0.546974809018219,0,0,0.703484977438482,0,0,0,0,0,0,0,0,0.0679697329768317,0.131545547125698,0,0.111231401892069,0,0.314231179832004,0,0,0,0,0.0714765441766563,0.790068058663633,0,0.347716544605159,0,0,0,0.691259661814092,0,0.118332000730565,0,0,0,0,0,0,0.294450700845729,0,0,0,0,0,0,0.198950775161368,0.118920090777569,0,0.109940516745429,0,0.0771741581079447,0,0,0.245148321753905,0,0,0,0.8453114551668,0.339854229375634,0,0.0644578879735772,0.199882311849858,0.178553938605658,0.352894871715692,0,0.730336388246517,0,0.430018749454354,0.315543124386369,0.135982980381829,0.872701380680755,0,0,0,0,0,0,0,0,0.26721740526556,0.18378979906969,0.250707539292375,0,0,0,0.310298987585686,0,0,0,0,0.112131862580613,0,0.202117188958219,0,0,0.134704106029175,0,0,0.244209805832924,0,0,0.0898252021065869,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376627918784408,0,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0.369754010166788,0.0774672005803016,0.284338464974843,0,0,0.200544447470142,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0.16072558669708,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0.786021525498329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0.144824403882799,0,0,0,0,0,0,0.795285947051099,0,0.189069634328136,0.221729397462564,0.087834785693126,0,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0,0,0,0,0,0,0,0.993943903390637,0,0,0,0,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0.298897361103602,0,0.161872944368132,0,0,0.245668634623536,0,0,0,0,0,0.336672227908132,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0.257640540045629,0,0,0,0.252433774244115,0,0.323292113637624,0,0,0,0.386521706326594,0,0,0.121973706129595,0,0,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0.26593811658487,0,0.257207374262142,0,0,0,0,0,0,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0.254094624222463,0,0,0,0.637938751653163,1.49801404789436,2.99161459204025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0,0,0,0,0.496215615637554,0.153461973288062,0.280660094433074,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0.219259876645935,0.784306353074702,0,0,0,0,0.0915694648183434,0.165018999841176,0,0,0,0.096670718292122,0.462145851343933,0,0.137836572484531,0.107420244868274,0.145016693914229,0.0852266274161009,0,0.165284915360978,0.192190067365106,0.382838137483752,0,0,0.31481234683064,0,0.308033580176089,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.714695326373367,0.411362273086194,0,0,0,0.106824071127473,0,0,0,0,0.142283686696828,0.159426272728822,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0.556812347790485,0,0,0,1.4098700508785,0,0.146508179271894,0.121360521749513,0,0,0.23874448473769,0,0.307160702099232,0,0.422008249231538,0.333926115068718,0,0.211125408127993,0,0.276283915531148,0,0.306806047506464,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0.437299999980979,0,0.1137934482855,1.01701460117107,0,0.344743373241465,0,0,0,0,0,0.110579259931225,0,0.219385397153973,0,0.278847488557207,0.0769502585037971,0,0,0.179515288819544,0.217294743844016,0,0,0,0,0,0.332423363800313,1.80476528493745,2.15668787749514,2.85296697858933,1.89753732724185,0.317873157960757,0,0,0,0,0,0,1.22206028986725,0,0.123563938946503,0.104421949505455,0.134802265961354,0,0.234264445725339,0,0,0.242780379534093,0,0,0,0.063186579628488,0.300646838828985,0.103688191397247,0,0,0,1.19472429772959,0,0,0,0.489961987071888,0.522355239482415,0,0.343972064943233,0,0,0,0,0,0,0.274083849293502,0,0,0,0,0,0,0,0.114536596165916,0.171594997861965,0,0.124252535565433,0,0,0.209205692624666,0.101998217636322,0.288950589901519,0,0.821432273351958,0,0.429765441419957,0,0,0,0,0,0,0,0.268733889946905,0.360299883542404,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.121499113316049,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.82092520749339,0,0.113312091520126,0,0,0.129282956361551,0.52893040697076,0,0,0.106787412567695,0.943225830597996,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0.500763722825999,0.573409195690071,0.332787154610557,0.0620964029413835,0.138348634936231,0,0,0,0.235265819698172,0,0.144921028610825,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0.226705925512272,0,0.244736704506468,0,0,0,0.353378291891762,0.192914038270915,0,0,0,0,0.553033744606923,0.194860308839388,0.132864840313363,0,0,0,0.211312123358627,0,0,0,0.567515953566836,0,0.139879507719444,0,0.639471856518258,0,0.157265941855896,0.54604819096007,0,0.212574920101683,0.247871528518004,0,0.318004350653419,0.0788617450012534,0,0,0,0.0642292250964595,0,0.319267718114302,0,0,0,0.484426936895553,1.42769420259154,0.0981477185010256,0,0,0,0,0,0,0,0.20170506870352,0,0.261906694481422,0,0.147856086217045,0.0675375846183947,0.781078098613847,0,0.253663240775627,0.546974809018219,0,0,0.703484977438482,0,0,0,0,0,0,0,0,0.0679697329768317,0.131545547125698,0,0.111231401892069,0,0.314231179832004,0,0,0,0,0.0714765441766563,0.790068058663633,0,0.347716544605159,0,0,0,0.691259661814092,0,0.118332000730565,0,0,0,0,0,0,0.294450700845729,0,0,0,0,0,0,0.198950775161368,0.118920090777569,0,0.109940516745429,0,0.0771741581079447,0,0,0.245148321753905,0,0,0,0.8453114551668,0.339854229375634,0,0.0644578879735772,0.199882311849858,0.178553938605658,0.352894871715692,0,0.730336388246517,0,0.430018749454354,0.315543124386369,0.135982980381829,0.872701380680755,0,0,0,0,0,0,0,0,0.26721740526556,0.18378979906969,0.250707539292375,0,0,0,0.310298987585686,0,0,0,0,0.112131862580613,0,0.202117188958219,0,0,0.134704106029175,0,0,0.244209805832924,0,0,0.0898252021065869,0,0,0,0,0,0 | ||
|short_description=p@chr2:9126333..9126337,- | |||
}} | }} |
Latest revision as of 13:07, 29 July 2015
Short description: | p@chr2:9126333..9126337, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:9126333..9126337, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 2.99e-25 | 3 |
granulocyte | 4.22e-10 | 8 |
myeloid cell | 7.59e-08 | 108 |
common myeloid progenitor | 7.59e-08 | 108 |
blood cell | 1.37e-07 | 11 |
pneumocyte | 3.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 2.71e-19 | 1 |
cranial nerve | 2.71e-19 | 1 |
nerve trunk | 2.71e-19 | 1 |
nerve connecting eye with brain | 2.71e-19 | 1 |
nerve | 2.71e-19 | 1 |
retinal neural layer | 2.71e-19 | 1 |
presumptive neural retina | 2.71e-19 | 1 |
neural tissue | 2.49e-10 | 2 |
multi cell component structure | 2.49e-10 | 2 |
neuron projection bundle | 2.49e-10 | 2 |
bronchoalveolar duct junction | 3.58e-10 | 2 |
alveolar duct | 3.58e-10 | 2 |
bronchiole | 3.58e-10 | 2 |
pulmonary alveolus epithelium | 3.35e-07 | 3 |
alveolus | 3.35e-07 | 3 |
pulmonary lobule | 3.35e-07 | 3 |
lobule | 3.35e-07 | 3 |
alveolus of lung | 3.35e-07 | 3 |
alveolar system | 3.35e-07 | 3 |
pulmonary acinus | 3.35e-07 | 3 |
alveolar sac | 3.35e-07 | 3 |
alveolar wall | 3.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.14e-36 | 8 |
myeloid leukemia | 9.44e-15 | 31 |
leukemia | 9.53e-12 | 39 |
lung adenocarcinoma | 3.58e-10 | 2 |
hematologic cancer | 5.37e-09 | 51 |
immune system cancer | 5.37e-09 | 51 |