FFCP PHASE1:Hg19::chr2:8822176..8822196,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:8822176..8822196,+ to FFCP PHASE1:Hg19::chr2:8822176..8822196,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3398 | |EntrezGene=3398 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5361 | |HGNC=5361 | ||
|TSSclassifier=strong | |||
|UniProt=Q02363 | |UniProt=Q02363 | ||
|association_with_transcript=0bp_to_ENST00000331129_5end | |||
|cluster_id=chr2:8822176..8822196,+ | |||
|description=CAGE_peak_1_at_ID2_5end | |||
|id=chr2:8822176..8822196,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.74e-24!140;CL:0000766!6.11e-23!76;CL:0000557!2.11e-20!71;CL:0000839!1.84e-19!70;CL:0000037!2.21e-19!172;CL:0000566!2.21e-19!172;CL:0002057!2.27e-19!42;CL:0000763!1.51e-18!112;CL:0000049!1.51e-18!112;CL:0000988!2.22e-18!182;CL:0002009!2.42e-18!65;CL:0002032!7.66e-18!165;CL:0000837!7.66e-18!165;CL:0000860!1.10e-17!45;CL:0002031!1.41e-17!124;CL:0002194!3.72e-17!63;CL:0000576!3.72e-17!63;CL:0000040!3.72e-17!63;CL:0000559!3.72e-17!63;CL:0002087!7.86e-16!119;CL:0000134!3.41e-11!358;CL:0002320!1.34e-09!365;CL:0000219!6.08e-09!390;CL:0000451!3.92e-07!10;CL:0000048!3.98e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.69e-13;33!CL:0002057;1.69e-13;33!CL:0000473;6.16e-12;39!CL:0000234;6.16e-12;39!CL:0000576;3.38e-11;48!CL:0000766;7.86e-11;69!CL:0000451;3.93e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.39e-25,136;CL:0000766,2.50e-24,72;CL:0000557,9.89e-22,67;CL:0000839,9.47e-21,66;CL:0000037,6.52e-20,168;CL:0000473,6.70e-20,48;CL:0000234,6.70e-20,48;CL:0002009,1.19e-19,61;CL:0000860,2.27e-19,42;CL:0002057,2.27e-19,42;CL:0000763,2.52e-19,108;CL:0000049,2.52e-19,108;CL:0000988,2.84e-19,177;CL:0002194,2.02e-18,59;CL:0000576,2.02e-18,59;CL:0000040,2.02e-18,59;CL:0000559,2.02e-18,59;CL:0002032,2.35e-18,161;CL:0000837,2.35e-18,161;CL:0002031,3.02e-18,120;CL:0002087,1.83e-16,115;CL:0000134,1.22e-11,354;CL:0002320,5.31e-10,361;CL:0000219,2.58e-09,386;CL:0000048,1.97e-07,427;CL:0000451,3.92e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002057;5.77e-14;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.01e-21!102;UBERON:0003061!1.01e-21!102;UBERON:0002371!7.00e-18!80;UBERON:0002193!1.98e-16!112;UBERON:0001474!8.70e-16!86;UBERON:0002405!1.37e-13!115;UBERON:0004765!5.21e-12!101;UBERON:0001434!5.21e-12!101;UBERON:0002384!4.74e-10!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.04e-22,98;UBERON:0003061,1.04e-22,98;UBERON:0002371,6.34e-19,76;UBERON:0002193,3.99e-17,108;UBERON:0001474,1.19e-16,82;UBERON:0002405,3.52e-14,93;UBERON:0004765,7.86e-12,90;UBERON:0001434,4.07e-11,100;UBERON:0002384,1.85e-10,371 | |||
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| ||
|short_description=p1@ID2 | |||
}} | }} |
Latest revision as of 20:24, 18 September 2015
Short description: | p1@ID2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ID2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000331129_5end |
EntrezGene: | ID2 |
HGNC: | 5361 |
UniProt: | Q02363 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 4.39e-25 | 136 |
myeloid leukocyte | 2.50e-24 | 72 |
granulocyte monocyte progenitor cell | 9.89e-22 | 67 |
myeloid lineage restricted progenitor cell | 9.47e-21 | 66 |
hematopoietic stem cell | 6.52e-20 | 168 |
defensive cell | 6.70e-20 | 48 |
phagocyte | 6.70e-20 | 48 |
macrophage dendritic cell progenitor | 1.19e-19 | 61 |
classical monocyte | 2.27e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.27e-19 | 42 |
myeloid cell | 2.52e-19 | 108 |
common myeloid progenitor | 2.52e-19 | 108 |
hematopoietic cell | 2.84e-19 | 177 |
monopoietic cell | 2.02e-18 | 59 |
monocyte | 2.02e-18 | 59 |
monoblast | 2.02e-18 | 59 |
promonocyte | 2.02e-18 | 59 |
hematopoietic oligopotent progenitor cell | 2.35e-18 | 161 |
hematopoietic multipotent progenitor cell | 2.35e-18 | 161 |
hematopoietic lineage restricted progenitor cell | 3.02e-18 | 120 |
nongranular leukocyte | 1.83e-16 | 115 |
mesenchymal cell | 1.22e-11 | 354 |
connective tissue cell | 5.31e-10 | 361 |
motile cell | 2.58e-09 | 386 |
multi fate stem cell | 1.97e-07 | 427 |
dendritic cell | 3.92e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.04e-22 | 98 |
blood island | 1.04e-22 | 98 |
bone marrow | 6.34e-19 | 76 |
hemolymphoid system | 3.99e-17 | 108 |
bone element | 1.19e-16 | 82 |
immune system | 3.52e-14 | 93 |
skeletal element | 7.86e-12 | 90 |
skeletal system | 4.07e-11 | 100 |
connective tissue | 1.85e-10 | 371 |