FFCP PHASE1:Hg19::chr2:87088995..87089018,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=926 | |EntrezGene=926 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1707 | |HGNC=1707 | ||
|TSSclassifier=strong | |||
|UniProt=B4E0F8 | |UniProt=B4E0F8 | ||
|association_with_transcript=0bp_to_ENST00000445248_5end | |||
|cluster_id=chr2:87088995..87089018,- | |||
|coexpression_cluster_id=C1077 | |||
|description=CAGE_peak_1_at_CD8B_5end | |||
|id=chr2:87088995..87089018,- | |||
|ontology_enrichment_celltype=CL:0000625!5.36e-31!11;CL:0000791!4.71e-21!18;CL:0000789!4.71e-21!18;CL:0002420!4.71e-21!18;CL:0002419!4.71e-21!18;CL:0000790!4.71e-21!18;CL:0000084!5.46e-17!25;CL:0000827!5.46e-17!25;CL:0000838!1.15e-11!52;CL:0000542!2.31e-11!53;CL:0000051!2.31e-11!53;CL:0002087!1.30e-09!119;CL:0000842!4.88e-09!3;CL:0000623!5.29e-09!3;CL:0000825!5.29e-09!3;CL:0000738!9.37e-09!140;CL:0000224!7.39e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000625;4.56e-71;11!CL:0000791;1.11e-42;18!CL:0000789;1.11e-42;18!CL:0002419;1.11e-42;18!CL:0000084;4.19e-36;25!CL:0000226;4.32e-19;3!CL:0000842;4.32e-19;3!CL:0000542;3.50e-11;53!CL:0000623;3.52e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,4.72e-71,11;CL:0000791,1.14e-42,18;CL:0000789,1.14e-42,18;CL:0002420,1.14e-42,18;CL:0002419,1.14e-42,18;CL:0000790,1.14e-42,18;CL:0000084,4.26e-36,25;CL:0000827,4.26e-36,25;CL:0000838,4.83e-22,52;CL:0000542,1.42e-21,53;CL:0000051,1.42e-21,53;CL:0000226,4.19e-19,3;CL:0000842,4.19e-19,3;CL:0002087,9.19e-13,115;CL:0000738,1.09e-11,136;CL:0000623,3.38e-09,3;CL:0000825,3.38e-09,3;CL:0000037,8.54e-09,168;CL:0000988,3.60e-08,177;CL:0002031,6.65e-08,120 | |||
|ontology_enrichment_development_v019=CL:0000790;1.11e-42;18!CL:0000051;3.50e-11;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!6.90e-25!15;UBERON:0000179!6.90e-25!15;UBERON:0000463!6.90e-25!15;UBERON:0007023!1.47e-14!115;UBERON:0002193!1.83e-08!112;UBERON:0002390!5.62e-08!102;UBERON:0003061!5.62e-08!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.98e-49;15!UBERON:0000179;4.98e-49;15!UBERON:0000463;4.98e-49;15!UBERON:0002390;1.57e-28;32!UBERON:0002193;3.68e-19;42!UBERON:0002370;7.36e-15;2!UBERON:0005058;7.36e-15;2!UBERON:0009113;7.36e-15;2!UBERON:0000029;1.18e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.23e-49,15;UBERON:0000179,5.23e-49,15;UBERON:0000463,5.23e-49,15;UBERON:0002193,8.76e-09,108;UBERON:0002390,1.86e-08,98;UBERON:0003061,1.86e-08,98;UBERON:0002370,7.47e-08,4;UBERON:0005058,7.47e-08,4;UBERON:0009113,7.47e-08,4;UBERON:0003295,7.47e-08,4;UBERON:0005562,7.47e-08,4;UBERON:0000029,1.04e-07,1 | |||
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| ||
|short_description=p1@CD8B | |||
}} | }} |
Latest revision as of 20:02, 18 September 2015
Short description: | p1@CD8B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CD8B_5end |
Coexpression cluster: | C1077_thymus_CD8_Natural_blood_NK_Peripheral_acute |
Association with transcript: | 0bp_to_ENST00000445248_5end |
EntrezGene: | CD8B |
HGNC: | 1707 |
UniProt: | B4E0F8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 4.72e-71 | 11 |
mature alpha-beta T cell | 1.14e-42 | 18 |
alpha-beta T cell | 1.14e-42 | 18 |
immature T cell | 1.14e-42 | 18 |
mature T cell | 1.14e-42 | 18 |
immature alpha-beta T cell | 1.14e-42 | 18 |
T cell | 4.26e-36 | 25 |
pro-T cell | 4.26e-36 | 25 |
lymphoid lineage restricted progenitor cell | 4.83e-22 | 52 |
lymphocyte | 1.42e-21 | 53 |
common lymphoid progenitor | 1.42e-21 | 53 |
single nucleate cell | 4.19e-19 | 3 |
mononuclear cell | 4.19e-19 | 3 |
nongranular leukocyte | 9.19e-13 | 115 |
leukocyte | 1.09e-11 | 136 |
natural killer cell | 3.38e-09 | 3 |
pro-NK cell | 3.38e-09 | 3 |
hematopoietic stem cell | 8.54e-09 | 168 |
hematopoietic cell | 3.60e-08 | 177 |
hematopoietic lineage restricted progenitor cell | 6.65e-08 | 120 |
Ontology term | p-value | n |
---|---|---|
blood | 5.23e-49 | 15 |
haemolymphatic fluid | 5.23e-49 | 15 |
organism substance | 5.23e-49 | 15 |
hemolymphoid system | 8.76e-09 | 108 |
hematopoietic system | 1.86e-08 | 98 |
blood island | 1.86e-08 | 98 |
thymus | 7.47e-08 | 4 |
hemolymphoid system gland | 7.47e-08 | 4 |
thymic region | 7.47e-08 | 4 |
pharyngeal gland | 7.47e-08 | 4 |
thymus primordium | 7.47e-08 | 4 |
lymph node | 1.04e-07 | 1 |