FFCP PHASE1:Hg19::chr2:73511560..73511628,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:73511560..73511628,- to FFCP PHASE1:Hg19::chr2:73511560..73511628,-: NSchange) |
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(12 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=150726 | |EntrezGene=150726 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29409 | |HGNC=29409 | ||
|TSSclassifier=strong | |||
|UniProt=G3V0Z7 | |UniProt=G3V0Z7 | ||
|association_with_transcript=-1bp_to_ENST00000520186,ENST00000521871_5end | |||
|cluster_id=chr2:73511560..73511628,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_FBXO41_5end | |||
|id=chr2:73511560..73511628,- | |||
|ontology_enrichment_celltype=CL:0000542!5.86e-20!53;CL:0000051!5.86e-20!53;CL:0000838!1.79e-19!52;CL:0002087!9.63e-13!119;CL:0000945!2.71e-12!24;CL:0000826!2.71e-12!24;CL:0000037!6.03e-11!172;CL:0000566!6.03e-11!172;CL:0000988!2.61e-10!182;CL:0000738!8.21e-10!140;CL:0002032!1.64e-09!165;CL:0000837!1.64e-09!165;CL:0002031!8.22e-09!124;CL:0000084!1.36e-07!25;CL:0000827!1.36e-07!25;CL:0000236!2.05e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000945;8.27e-13;24!CL:0000542;4.96e-12;53!CL:0000084;1.37e-07;25!CL:0000236;2.87e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.60e-20,53;CL:0000051,1.60e-20,53;CL:0000838,5.05e-20,52;CL:0002087,4.13e-13,115;CL:0000945,1.27e-12,24;CL:0000826,1.27e-12,24;CL:0000037,4.53e-12,168;CL:0000988,1.10e-11,177;CL:0000738,1.13e-10,136;CL:0002032,1.56e-10,161;CL:0000837,1.56e-10,161;CL:0002031,2.75e-09,120;CL:0000084,8.89e-08,25;CL:0000827,8.89e-08,25;CL:0000236,1.35e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000051;4.96e-12;53 | |||
|ontology_enrichment_disease=DOID:2531!2.49e-07!51;DOID:0060083!2.49e-07!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.12e-07,51;DOID:0060083,1.12e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0001049!6.13e-20!57;UBERON:0005068!6.13e-20!57;UBERON:0006241!6.13e-20!57;UBERON:0007135!6.13e-20!57;UBERON:0001017!7.05e-20!82;UBERON:0005743!1.92e-19!86;UBERON:0000955!2.45e-19!69;UBERON:0006238!2.45e-19!69;UBERON:0000073!1.63e-18!94;UBERON:0001016!1.63e-18!94;UBERON:0002616!1.41e-17!59;UBERON:0002780!3.29e-17!41;UBERON:0001890!3.29e-17!41;UBERON:0006240!3.29e-17!41;UBERON:0003080!5.60e-17!42;UBERON:0001869!1.28e-15!32;UBERON:0002020!6.39e-15!34;UBERON:0003528!6.39e-15!34;UBERON:0001893!6.81e-15!34;UBERON:0002619!1.94e-14!22;UBERON:0002791!3.00e-14!33;UBERON:0002346!3.66e-14!90;UBERON:0001950!3.19e-13!20;UBERON:0003075!4.86e-13!86;UBERON:0007284!4.86e-13!86;UBERON:0003056!2.34e-12!61;UBERON:0000956!5.57e-12!25;UBERON:0000203!5.57e-12!25;UBERON:0000153!2.16e-08!129;UBERON:0007811!2.16e-08!129;UBERON:0000033!4.58e-08!123;UBERON:0000924!5.95e-08!173;UBERON:0006601!5.95e-08!173;UBERON:0007023!2.05e-07!115;UBERON:0004121!3.41e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;3.85e-15;22!UBERON:0001869;1.45e-14;32!UBERON:0001950;7.26e-14;20!UBERON:0001893;1.47e-13;34!UBERON:0003528;1.69e-13;34!UBERON:0002020;1.69e-13;34!UBERON:0002791;3.87e-13;32!UBERON:0002780;6.95e-13;41!UBERON:0001890;6.95e-13;41!UBERON:0000956;1.51e-12;25!UBERON:0000203;1.51e-12;25!UBERON:0000073;4.17e-12;53!UBERON:0002616;4.17e-12;53!UBERON:0000955;7.63e-10;68!UBERON:0001017;1.47e-08;75!UBERON:0001016;6.86e-08;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.82e-21,53;UBERON:0002616,7.82e-21,53;UBERON:0001049,1.61e-20,56;UBERON:0005068,1.61e-20,56;UBERON:0006241,1.61e-20,56;UBERON:0007135,1.61e-20,56;UBERON:0001017,3.78e-20,81;UBERON:0000955,1.35e-19,68;UBERON:0006238,1.35e-19,68;UBERON:0001016,2.51e-19,89;UBERON:0002780,1.68e-17,41;UBERON:0001890,1.68e-17,41;UBERON:0003080,1.68e-17,41;UBERON:0006240,1.68e-17,41;UBERON:0001869,5.02e-16,32;UBERON:0003528,3.86e-15,34;UBERON:0002020,3.86e-15,34;UBERON:0001893,4.12e-15,34;UBERON:0002619,7.83e-15,22;UBERON:0002791,3.11e-14,32;UBERON:0001950,1.40e-13,20;UBERON:0002346,2.81e-13,86;UBERON:0000956,2.83e-12,25;UBERON:0000203,2.83e-12,25;UBERON:0003075,3.80e-12,82;UBERON:0007284,3.80e-12,82;UBERON:0003056,5.97e-12,61;UBERON:0010371,1.64e-09,104;UBERON:0004121,8.55e-08,171;UBERON:0000924,8.55e-08,171;UBERON:0006601,8.55e-08,171;UBERON:0007023,2.15e-07,114;UBERON:0011216,4.53e-07,223 | |||
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| ||
|short_description=p1@FBXO41 | |||
}} | }} |
Latest revision as of 09:23, 18 September 2015
Short description: | p1@FBXO41 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FBXO41_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -1bp_to_ENST00000520186, ENST00000521871_5end |
EntrezGene: | FBXO41 |
HGNC: | 29409 |
UniProt: | G3V0Z7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.60e-20 | 53 |
common lymphoid progenitor | 1.60e-20 | 53 |
lymphoid lineage restricted progenitor cell | 5.05e-20 | 52 |
nongranular leukocyte | 4.13e-13 | 115 |
lymphocyte of B lineage | 1.27e-12 | 24 |
pro-B cell | 1.27e-12 | 24 |
hematopoietic stem cell | 4.53e-12 | 168 |
hematopoietic cell | 1.10e-11 | 177 |
leukocyte | 1.13e-10 | 136 |
hematopoietic oligopotent progenitor cell | 1.56e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.56e-10 | 161 |
hematopoietic lineage restricted progenitor cell | 2.75e-09 | 120 |
T cell | 8.89e-08 | 25 |
pro-T cell | 8.89e-08 | 25 |
B cell | 1.35e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 7.82e-21 | 53 |
regional part of brain | 7.82e-21 | 53 |
neural tube | 1.61e-20 | 56 |
neural rod | 1.61e-20 | 56 |
future spinal cord | 1.61e-20 | 56 |
neural keel | 1.61e-20 | 56 |
central nervous system | 3.78e-20 | 81 |
brain | 1.35e-19 | 68 |
future brain | 1.35e-19 | 68 |
nervous system | 2.51e-19 | 89 |
regional part of forebrain | 1.68e-17 | 41 |
forebrain | 1.68e-17 | 41 |
anterior neural tube | 1.68e-17 | 41 |
future forebrain | 1.68e-17 | 41 |
cerebral hemisphere | 5.02e-16 | 32 |
brain grey matter | 3.86e-15 | 34 |
gray matter | 3.86e-15 | 34 |
telencephalon | 4.12e-15 | 34 |
regional part of cerebral cortex | 7.83e-15 | 22 |
regional part of telencephalon | 3.11e-14 | 32 |
neocortex | 1.40e-13 | 20 |
neurectoderm | 2.81e-13 | 86 |
cerebral cortex | 2.83e-12 | 25 |
pallium | 2.83e-12 | 25 |
neural plate | 3.80e-12 | 82 |
presumptive neural plate | 3.80e-12 | 82 |
pre-chordal neural plate | 5.97e-12 | 61 |
ecto-epithelium | 1.64e-09 | 104 |
ectoderm-derived structure | 8.55e-08 | 171 |
ectoderm | 8.55e-08 | 171 |
presumptive ectoderm | 8.55e-08 | 171 |
adult organism | 2.15e-07 | 114 |
organ system subdivision | 4.53e-07 | 223 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.12e-07 | 51 |
immune system cancer | 1.12e-07 | 51 |