FFCP PHASE1:Hg19::chr2:69001913..69001926,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:69001913..69001926,+ to FFCP PHASE1:Hg19::chr2:69001913..69001926,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9938 | |EntrezGene=9938 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28951 | |HGNC=28951 | ||
|TSSclassifier=strong | |||
|UniProt=G5E9G2,E7EU69,P42331 | |UniProt=G5E9G2,E7EU69,P42331 | ||
|association_with_transcript=-6bp_to_ENST00000409030,ENST00000409220,ENST00000482106,NM_001166276,NM_014882,uc002sev.2,uc002sew.2,uc002sex.2_5end | |||
|cluster_id=chr2:69001913..69001926,+ | |||
|description=CAGE_peak_9_at_ARHGAP25_5end | |||
|id=chr2:69001913..69001926,+ | |||
|ontology_enrichment_celltype=CL:0000542!5.03e-21!53;CL:0000051!5.03e-21!53;CL:0000838!1.71e-20!52;CL:0000037!3.73e-18!172;CL:0000566!3.73e-18!172;CL:0002032!3.32e-17!165;CL:0000837!3.32e-17!165;CL:0000988!3.86e-17!182;CL:0000738!8.12e-16!140;CL:0000791!5.64e-15!18;CL:0000789!5.64e-15!18;CL:0002420!5.64e-15!18;CL:0002419!5.64e-15!18;CL:0000790!5.64e-15!18;CL:0002087!3.89e-13!119;CL:0002031!1.16e-12!124;CL:0000625!6.40e-12!11;CL:0000084!1.00e-11!25;CL:0000827!1.00e-11!25;CL:0000236!2.36e-10!14;CL:0000945!8.96e-08!24;CL:0000826!8.96e-08!24 | |||
|ontology_enrichment_celltype_v019=CL:0000791;3.46e-30;18!CL:0000789;3.46e-30;18!CL:0002419;3.46e-30;18!CL:0000625;4.96e-28;11!CL:0000084;1.48e-20;25!CL:0000542;2.45e-19;53!CL:0000236;5.85e-14;13!CL:0000094;1.74e-10;8!CL:0000945;3.98e-10;24!CL:0000623;4.88e-09;3!CL:0002087;1.89e-07;104!CL:0000081;1.99e-07;11!CL:0000767;2.11e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.19e-34,52;CL:0000542,7.83e-34,53;CL:0000051,7.83e-34,53;CL:0000791,2.67e-30,18;CL:0000789,2.67e-30,18;CL:0002420,2.67e-30,18;CL:0002419,2.67e-30,18;CL:0000790,2.67e-30,18;CL:0000625,3.51e-28,11;CL:0000738,1.16e-24,136;CL:0000084,1.24e-20,25;CL:0000827,1.24e-20,25;CL:0000037,7.60e-20,168;CL:0002032,6.39e-19,161;CL:0000837,6.39e-19,161;CL:0000988,3.18e-18,177;CL:0002031,4.53e-18,120;CL:0002087,1.42e-17,115;CL:0000236,5.27e-13,14;CL:0000094,1.42e-10,8;CL:0000945,2.47e-10,24;CL:0000826,2.47e-10,24;CL:0000623,5.10e-09,3;CL:0000825,5.10e-09,3;CL:0000767,1.35e-07,3;CL:0000081,1.73e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;3.46e-30;18!CL:0000051;2.45e-19;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.32e-13!115;UBERON:0000178!6.96e-11!15;UBERON:0000179!6.96e-11!15;UBERON:0000463!6.96e-11!15;UBERON:0002193!8.54e-09!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.80e-18;15!UBERON:0000179;1.80e-18;15!UBERON:0000463;1.80e-18;15!UBERON:0002390;2.04e-11;32!UBERON:0002193;1.67e-10;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.09e-18,15;UBERON:0000179,1.09e-18,15;UBERON:0000463,1.09e-18,15;UBERON:0002193,1.70e-08,108 | |||
|phase1_expression=0.181678379270557,0,0.986680828671798,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,1.91914699048606,1.85779347979291,0,0,0,0.309868802321207,1.9903692548239,0.293600439334847,2.76997704265939,1.80490002723128,0.651032612147555,0.895661896959697,1.29557466407592,1.28787783817093,0.290796477559129,0,0,0,0.411167888021826,0.619412741790207,0.28769239232215,0,0,0,0.645484683583826,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0.44931452458598,0,0,0,0.19891667719909,0.182664153764634,1.75996244461323,0.546138611262131,3.55803701545422,1.28019066769952,1.60158394814405,1.72425731986345,0.661044872784862,4.77026877267682,3.41527781465669,3.52342313622563,3.82273228125229,0,0,0.263384084775077,1.37696839079683,0.393010762749165,0,0.501559486172034,5.54067853277104,5.20792586308207,7.79306913631645,0.222820913770347,4.71369451959739,3.32300841875432,2.16643091012012,0.128091319725675,0.130059347559878,0.657751618414705,0.276350017785848,0.579606171470105,3.26230438956533,2.40786745280742,2.09071047609954,0.566546713487831,0.766440987203842,3.09264700934367,1.01207876807801,3.50421955756506,6.51083453856419,10.4549724889321,4.9689789295665,7.80718328041952,4.99722906209383,3.78843603270427,2.46338399076314,4.43534835094411,2.67440195783507,3.04131248153878,0,0,0.895037932904712,0,0,0,0,0,0,0,0,1.11332214173056,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0.275118041940067,0,0.775250277507987,1.06729878806013,1.00416183829401,0,0,0,0.367663080345869,0,0.267899184852239,0,0,0,0,0,5.27121669744253,0,0,0.496971951695318,0,0.132409180813219,0,0,0,0,0,0,0.269421344139376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82032272387605,2.15585442544872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.380508304469197,0,0,0.984868024349589,0,0,0,0,0,0,0.290633938513962,0.383382679165211,0,0.880484340132261,8.70778085271243,6.3412779503463,7.44830357215642,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434343920002738,0,0,2.24170287987055,7.09310736726938,3.66566877261179,4.10697716095195,0,0,0,0,0,2.24702107184155,0,2.07207756718018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86091223510599,0.647142602455851,1.81436848265855,0,0,0,0,0,0,0.384417447767103,0.511707249066704,0.160853921143607,0,0,0,0,0.519254429183621,0,0,0,0,0,0,0,0,0,0.784349769176855,0,0,1.13733384070897,0.340187410553031,0.431831832204279,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.515205058238611,0,0,0,0,0,0.193341436584244,0,0,0,0.322260734604821,0,0.170453254832202,0,0,0,0,0,0,0,0,0.308033580176089,0.532306030317022,0,0,0,0,0,0.953150969619124,0,0,0,0,0.359744915166629,0,0,0.202182481573316,0,0.842516912477962,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,4.56702848308952,3.0585488285695,3.41788312304498,4.2881719582402,2.46817363851717,5.18778648954174,2.70015718619057,1.58625035258854,0,0,0,0.557409525377156,0.865615277858669,0.497992903438899,0,0.199579371432817,0.191505370132367,0.635020748171649,0.973865820823666,0,0.228234679033192,0.313359791546046,0,1.35433422241283,0,0,0,0,0,0.223676107892416,0.166849141711909,0.586164286206121,0.278406173895242,0,0.540911356951966,0,0,0,0.293016358543788,0,0.111443384277478,0,0,0.296964680832639,0,0,0.140669416410513,0,0.16480387422676,0,0.19924798825107,0.828851746593443,0,0,0,0,0,0,0,0.197286811273867,4.7896618469388,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0.331737779793674,0,0,0,0,0.615602068030377,0,0,0,0,0,0.274792780205587,0,0,0.31396051279005,0.166211681900156,0,0.392125068635479,0.335643173951685,0,0.635746315921515,0,0,0,0,0,0.442287822516696,0,0,0.247127877893006,0.208843899010911,0.337005664903385,0.802577647298789,0,0.91227394607833,0,0,0.394584402849391,0,0,0.442306057399416,0,0,0,0,0,0,0,0,0,0,0,1.04836000945218,0,0,0,0,0.290967049465258,0,0.225980740780532,0,0,0.189932387867636,0,0,0.85381197895741,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,1.27746588066972,1.28929632425987,0,0,0.458320848023367,1.43574604915363,0,0.429226048136571,0.446342914883745,0.201550417460179,1.44119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630445658393585,0.891727998294968,0,0,0,0,0.662091970365432,0,0,0.864221491201268,0,0,0,1.02232813071253,0.453248366080503,0.58620893471233,0,0.129282956361551,0.13223260174269,0,0,0.427149650270779,0.314408610199332,0.828478110694391,0.992332043623902,0.197611631897944,2.55764456599881,0,0,0.7520696820681,0,0.327872630709804,0,0,0,0.1251909307065,0,0.110929051536852,0.372578417648301,0,0,0.303298235083296,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0.477890301491107,0.449803112163605,0.155262956876259,0.414706207840855,0,0.521745061811734,0,0,1.62748293281865,0.909243296012797,0.214821114084977,0.928067519756987,1.19428766609585,0,0,0,2.52369796457302,0,0,0,0,0,0,0,0,0,0.176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| ||
|short_description=p9@ARHGAP25 | |||
}} | }} |
Latest revision as of 03:06, 18 September 2015
Short description: | p9@ARHGAP25 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_ARHGAP25_5end |
Coexpression cluster: | NA |
Association with transcript: | -6bp_to_ENST00000409030, ENST00000409220, ENST00000482106, NM_001166276, NM_014882, uc002sev.2, uc002sew.2, uc002sex.2_5end |
EntrezGene: | ARHGAP25 |
HGNC: | 28951 |
UniProt: | G5E9G2E7EU69P42331 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.19e-34 | 52 |
lymphocyte | 7.83e-34 | 53 |
common lymphoid progenitor | 7.83e-34 | 53 |
mature alpha-beta T cell | 2.67e-30 | 18 |
alpha-beta T cell | 2.67e-30 | 18 |
immature T cell | 2.67e-30 | 18 |
mature T cell | 2.67e-30 | 18 |
immature alpha-beta T cell | 2.67e-30 | 18 |
CD8-positive, alpha-beta T cell | 3.51e-28 | 11 |
leukocyte | 1.16e-24 | 136 |
T cell | 1.24e-20 | 25 |
pro-T cell | 1.24e-20 | 25 |
hematopoietic stem cell | 7.60e-20 | 168 |
hematopoietic oligopotent progenitor cell | 6.39e-19 | 161 |
hematopoietic multipotent progenitor cell | 6.39e-19 | 161 |
hematopoietic cell | 3.18e-18 | 177 |
hematopoietic lineage restricted progenitor cell | 4.53e-18 | 120 |
nongranular leukocyte | 1.42e-17 | 115 |
B cell | 5.27e-13 | 14 |
granulocyte | 1.42e-10 | 8 |
lymphocyte of B lineage | 2.47e-10 | 24 |
pro-B cell | 2.47e-10 | 24 |
natural killer cell | 5.10e-09 | 3 |
pro-NK cell | 5.10e-09 | 3 |
basophil | 1.35e-07 | 3 |
blood cell | 1.73e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
blood | 1.09e-18 | 15 |
haemolymphatic fluid | 1.09e-18 | 15 |
organism substance | 1.09e-18 | 15 |
hemolymphoid system | 1.70e-08 | 108 |