FFCP PHASE1:Hg19::chr2:55214823..55214844,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:55214823..55214844,- to FFCP PHASE1:Hg19::chr2:55214823..55214844,-: NSchange) |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57142 | |EntrezGene=57142 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14085 | |HGNC=14085 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-54bp_to_ENST00000486085_5end | |||
|cluster_id=chr2:55214823..55214844,- | |||
|description=CAGE_peak_16_at_RTN4_5end | |||
|id=chr2:55214823..55214844,- | |||
|ontology_enrichment_celltype=CL:0000055!1.77e-17!180;CL:0000222!7.99e-11!119;CL:0000057!2.44e-09!75;CL:0000220!9.07e-09!246;CL:0002321!1.12e-08!248;CL:0000680!3.76e-08!57;CL:0000056!3.76e-08!57;CL:0000355!3.76e-08!57;CL:0000192!5.89e-08!42;CL:0000514!5.89e-08!42;CL:0000183!1.00e-07!59;CL:0000393!1.15e-07!60;CL:0000211!1.15e-07!60;CL:0000187!4.26e-07!54 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.15e-08,76;CL:0000222,1.20e-08,121 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!1.16e-11!659;UBERON:0000467!1.89e-11!625;UBERON:0000480!2.21e-11!626;UBERON:0000914!2.39e-09!83;UBERON:0002329!2.39e-09!83;UBERON:0003077!2.39e-09!83;UBERON:0003059!2.39e-09!83;UBERON:0007282!2.39e-09!83;UBERON:0009618!2.39e-09!83;UBERON:0007285!2.39e-09!83;UBERON:0000475!1.27e-08!365;UBERON:0005256!1.98e-08!143;UBERON:0001637!2.98e-08!42;UBERON:0003509!2.98e-08!42;UBERON:0004572!2.98e-08!42;UBERON:0004290!4.73e-08!70;UBERON:0000922!5.39e-08!612;UBERON:0002385!5.54e-08!63;UBERON:0001015!5.54e-08!63;UBERON:0000383!5.54e-08!63;UBERON:0000119!5.73e-08!312;UBERON:0000483!7.12e-08!309;UBERON:0000923!7.36e-08!604;UBERON:0005291!7.36e-08!604;UBERON:0006598!7.36e-08!604;UBERON:0002532!7.36e-08!604;UBERON:0001134!9.47e-08!61;UBERON:0002036!9.47e-08!61;UBERON:0003082!9.47e-08!61;UBERON:0000486!1.00e-07!82;UBERON:0000477!1.10e-07!286;UBERON:0002050!1.16e-07!605;UBERON:0005423!1.16e-07!605;UBERON:0002049!8.04e-07!79;UBERON:0007798!8.04e-07!79;UBERON:0004573!8.47e-07!33;UBERON:0004571!8.47e-07!33 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=1.09007027562334,3.63970890614671,0.563817616383885,1.0007329835313,4.46961094427288,3.48935409640147,2.53299878168311,0.631719873426831,0.261185628199839,0.982935746006035,0,0.655324116390517,1.05506791291381,0.990130823680373,2.65117900582333,2.01697543935533,2.41077811209591,2.92124036154949,2.43966399395253,0.369363174230364,0.816002764977012,0.626909442956176,1.43117993565528,1.09499540058307,2.00868223351684,0.382067028739756,0.0821005894499457,0.0787107813136792,0,0,0,0,0.30120591877825,0,0,0,0,0,0.200544447470142,0.217010870715852,0,0,0.257575567634187,0.436194716338694,0.377875943688809,0,0.232429036905685,0.822335776043652,0.929119112685311,0,0.512321413058201,1.41889337933151,0,0.645484683583826,0,0.564727018627814,0.272906150057846,0.224723484445085,0.612167784741805,0,1.27867425159808,1.64925650093358,0.598390972864896,0.426224750532694,1.16083695451434,0.56738522469114,0.622822248995575,1.00499466102697,1.0429658368404,0.65156653411535,0.605399502633369,0.736555271975129,0.632924774881769,0,0.212604299965044,0.419317291016752,0.112328631146495,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790152254325231,0.196709770113833,0,0,0,0,0,0,0.111410456885174,0,0,0,0.25618263945135,0.390178042679635,0.328875809207352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0.201606743224732,0,0,0,0.670700859703636,0.383587685530591,0.361439152384566,1.50401373190767,1.59331170856906,0,0.486634870302636,0.378139268656271,2.4390233720882,0.966182642624386,0.130979075497713,0.364295288292542,0,0.649094787309367,0.348259474598534,0.664789802594326,0.238490624305342,0,0,0.39752481473341,0.860234595106124,0.347140501607594,1.13061588384802,1.25849830862972,0.550236083880135,1.04497483268405,1.03366703667732,1.06729878806013,1.33888245105868,0,0,1.22031028774085,0.735326160691737,2.43042584364528,0.446498641420399,0.22452937262617,0.112611480483322,0,0.949265659568129,0.366403487860815,0,0,0,1.49091585508596,0.759783069987479,0.132409180813219,2.86836620748814,1.06400514659507,1.12135520028461,0,2.22000793575444,0.311211035399766,0.67355336034844,1.47115712802113,1.05950199351452,0,0.234321431833797,0.624320153660641,0.570471821544449,1.19558944441441,0.939475989150119,1.29498355494505,1.12360645361799,1.22492502752936,1.10550885580591,1.54988671763648,0,1.7308685049499,0,4.31170885089743,0.336672227908132,0.750711119231785,0.554128230968366,0.438977620880838,2.14541457059314,0.300476117813194,0.907457465280168,1.07633781413317,0.640672166455702,1.27159140695737,2.10063767259082,0.103052529238439,1.54584324027377,0.930584281657949,0.337552664482532,0.584622030967192,1.00973509697646,0.552299391853796,0.646584227275248,2.84007674013291,0.403008392910561,0.847802961552438,0.966304265816484,0,0,0.487894824518382,0.132529768321485,0.580969714347592,0.207322110030741,0.504641701751257,0,0,0.643240938192885,0,0.464367928031979,1.44375896333917,0.354920400119532,0.842923450390509,0.482022059766964,0.772057809126758,0.871517776369625,0.474541238222193,0.404493924480493,0.392442930250692,0.769494313892781,0,0,1.2347220339942,0,0,0.982827216677626,0.590789906681404,0,0.245976877086227,1.02940686179115,0.548751427043128,1.1240175325762,0.904760751704678,0.185176890317059,2.6064664424826,0,1.44331342025273,1.39116485970092,0.469634776943287,0.577465791044295,2.31492756288305,0.380508304469197,0,0,0,1.40402559083543,0.594524649154913,0,1.00789276919316,0.425325291727159,0.358234090811393,0.581267877027924,1.15014803749563,0.985326475791887,0.088048434013226,0.414656231081544,0,0.12624243342638,0.253991577168676,0.763976851116555,0,0,0.616964956219941,0.901029173531752,0.285826432630578,0.224262168690721,0.43596006883328,0.8800594298514,0.129271715757778,0,0,0.531876233169741,1.04007436911366,0.514414748524284,0,1.8649552531127,3.0025378668211,0,0,0.977208552881205,0.710783897485092,1.58390374586686,0.602878754119172,0.871533458600294,1.59956785891291,2.43247561282381,1.50677127429638,4.21667878966063,1.19812427745791,0,0,2.46128221334885,1.2328579353023,1.43248770591916,0.112085143993527,0,0.215627574859517,0,0,0,0.773288812777695,0.837581326671744,0.637938751653163,0,0,0,0.736148950314839,1.50051156317903,1.62759014219841,1.24782516918484,5.35286966391485,1.73472656537328,1.17141414992713,0.601892199455438,4.5481500811197,2.0694614258501,0.664225598535437,0.921845842708516,0.868836144680828,0.783204629850962,0.686286847621712,0,1.2942852049117,0.106727557803444,0.303127571446259,0,0.30239029332968,0.248107807818777,0.460385919864187,2.24528075546459,1.53766979106841,1.02341449813341,1.28683136914886,2.96836132889982,0.308419387605311,0.355123450626254,0.410635780069046,1.55776328755086,0.581051892299796,0.120859449591622,1.60405176242628,0.828728900423067,0.68888668898764,2.73136752010076,1.18011973463482,0.451199612907412,1.77135275340154,0,0,1.05551628892876,1.13733384070897,1.02056223165909,1.51141141271498,0,0.812839312631559,0.501689773854853,0.254876273045038,0.831076008928724,0.895499018888713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| ||
|short_description=p16@RTN4 | |||
}} | }} |
Latest revision as of 16:37, 17 September 2015
Short description: | p16@RTN4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_RTN4_5end |
Coexpression cluster: | NA |
Association with transcript: | -54bp_to_ENST00000486085_5end |
EntrezGene: | RTN4 |
HGNC: | 14085 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.15e-08 | 76 |
mesodermal cell | 1.20e-08 | 121 |