FFCP PHASE1:Hg19::chr2:46524474..46524491,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:46524474..46524491,+ to FFCP PHASE1:Hg19::chr2:46524474..46524491,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2034 | |EntrezGene=2034 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3374 | |HGNC=3374 | ||
|TSSclassifier=strong | |||
|UniProt=Q99814,B3KW07 | |UniProt=Q99814,B3KW07 | ||
|association_with_transcript=-49bp_to_ENST00000263734,NM_001430_5end | |||
|cluster_id=chr2:46524474..46524491,+ | |||
|description=CAGE_peak_4_at_EPAS1_5end | |||
|id=chr2:46524474..46524491,+ | |||
|ontology_enrichment_celltype=CL:0000222!6.78e-08!119;CL:0000183!2.40e-07!59 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,7.01e-08,121;CL:0000187,3.04e-07,55;CL:0000680,7.52e-07,58;CL:0000056,7.52e-07,58;CL:0000355,7.52e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!1.12e-10!659;UBERON:0002100!1.84e-10!216;UBERON:0000467!3.03e-10!625;UBERON:0000480!3.78e-10!626;UBERON:0000475!3.17e-09!365;UBERON:0000926!5.44e-09!448;UBERON:0004120!5.44e-09!448;UBERON:0006603!5.44e-09!448;UBERON:0005256!7.52e-09!143;UBERON:0000062!3.03e-08!511;UBERON:0003104!8.01e-08!238;UBERON:0009142!8.01e-08!238;UBERON:0003914!1.17e-07!118;UBERON:0000923!1.29e-07!604;UBERON:0005291!1.29e-07!604;UBERON:0006598!1.29e-07!604;UBERON:0002532!1.29e-07!604;UBERON:0002050!1.31e-07!605;UBERON:0005423!1.31e-07!605;UBERON:0000922!3.22e-07!612;UBERON:0000466!6.83e-07!126;UBERON:0000464!7.23e-07!104 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,1.80e-10,199;UBERON:0003104,1.40e-09,160;UBERON:0009142,1.40e-09,160;UBERON:0005256,2.21e-08,122;UBERON:0000926,7.01e-07,315;UBERON:0004120,7.01e-07,315;UBERON:0006603,7.01e-07,315 | |||
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| ||
|short_description=p4@EPAS1 | |||
}} | }} |
Latest revision as of 10:26, 17 September 2015
Short description: | p4@EPAS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_EPAS1_5end |
Coexpression cluster: | NA |
Association with transcript: | -49bp_to_ENST00000263734, NM_001430_5end |
EntrezGene: | EPAS1 |
HGNC: | 3374 |
UniProt: | Q99814B3KW07 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 7.01e-08 | 121 |
muscle cell | 3.04e-07 | 55 |
muscle precursor cell | 7.52e-07 | 58 |
myoblast | 7.52e-07 | 58 |
multi-potent skeletal muscle stem cell | 7.52e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
trunk | 1.80e-10 | 199 |
mesenchyme | 1.40e-09 | 160 |
entire embryonic mesenchyme | 1.40e-09 | 160 |
trunk mesenchyme | 2.21e-08 | 122 |
mesoderm | 7.01e-07 | 315 |
mesoderm-derived structure | 7.01e-07 | 315 |
presumptive mesoderm | 7.01e-07 | 315 |