FFCP PHASE1:Hg19::chr2:26257346..26257357,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:26257346..26257357,+ to FFCP PHASE1:Hg19::chr2:26257346..26257357,+: NSchange) |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10890 | |EntrezGene=10890 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9759 | |HGNC=9759 | ||
|TSSclassifier=strong | |||
|UniProt=P61026 | |UniProt=P61026 | ||
|association_with_transcript=367bp_to_ENST00000264710_5end | |||
|cluster_id=chr2:26257346..26257357,+ | |||
|description=CAGE_peak_15_at_RAB10_5end | |||
|id=chr2:26257346..26257357,+ | |||
|ontology_enrichment_celltype=CL:0002057!4.47e-27!42;CL:0000860!2.14e-24!45;CL:0002009!5.72e-24!65;CL:0002194!1.40e-23!63;CL:0000576!1.40e-23!63;CL:0000040!1.40e-23!63;CL:0000559!1.40e-23!63;CL:0000839!4.38e-23!70;CL:0000766!5.93e-23!76;CL:0000557!8.59e-23!71;CL:0000763!8.45e-17!112;CL:0000049!8.45e-17!112;CL:0002031!2.33e-10!124;CL:0000738!5.03e-10!140;CL:0002087!6.76e-09!119;CL:0002032!1.28e-08!165;CL:0000837!1.28e-08!165;CL:0000037!1.18e-07!172;CL:0000566!1.18e-07!172;CL:0000988!7.90e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.24e-22;33!CL:0002057;1.24e-22;33!CL:0000473;3.68e-21;39!CL:0000234;3.68e-21;39!CL:0000576;4.48e-18;48!CL:0000766;3.31e-14;69!CL:0000875;3.59e-11;3!CL:0002396;3.59e-11;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.81e-33,48;CL:0000234,2.81e-33,48;CL:0002009,8.20e-29,61;CL:0000860,2.19e-28,42;CL:0002057,2.19e-28,42;CL:0002194,4.41e-26,59;CL:0000576,4.41e-26,59;CL:0000040,4.41e-26,59;CL:0000559,4.41e-26,59;CL:0000557,5.15e-26,67;CL:0000766,5.36e-24,72;CL:0000839,4.50e-23,66;CL:0000763,2.93e-17,108;CL:0000049,2.93e-17,108;CL:0002031,2.48e-13,120;CL:0000738,4.32e-13,136;CL:0002087,3.65e-12,115;CL:0000875,2.15e-11,3;CL:0002396,2.15e-11,3;CL:0002032,1.38e-10,161;CL:0000837,1.38e-10,161;CL:0000037,5.13e-10,168;CL:0000988,2.38e-09,177 | |||
|ontology_enrichment_development_v019=CL:0002057;4.29e-20;42!UBERON:0009143;1.60e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.13e-19!80;UBERON:0001474!4.84e-18!86;UBERON:0002390!1.77e-17!102;UBERON:0003061!1.77e-17!102;UBERON:0002193!3.87e-16!112;UBERON:0004765!6.78e-14!101;UBERON:0001434!6.78e-14!101;UBERON:0002405!1.57e-13!115;UBERON:0002204!9.29e-09!167;UBERON:0003081!4.97e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0001723;3.59e-11;3!UBERON:0001033;3.59e-11;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.24e-22,76;UBERON:0001474,8.73e-21,82;UBERON:0004765,1.06e-18,90;UBERON:0002405,5.21e-18,93;UBERON:0002390,5.96e-17,98;UBERON:0003061,5.96e-17,98;UBERON:0001434,1.48e-16,100;UBERON:0002193,3.99e-15,108;UBERON:0001723,2.64e-11,3;UBERON:0001033,2.64e-11,3;UBERON:0010056,2.64e-11,3;UBERON:0002204,8.95e-09,167;UBERON:0003081,8.62e-08,203 | |||
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| ||
|short_description=p15@RAB10 | |||
}} | }} |
Latest revision as of 14:37, 16 September 2015
Short description: | p15@RAB10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_RAB10_5end |
Coexpression cluster: | NA |
Association with transcript: | 367bp_to_ENST00000264710_5end |
EntrezGene: | RAB10 |
HGNC: | 9759 |
UniProt: | P61026 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.81e-33 | 48 |
phagocyte | 2.81e-33 | 48 |
macrophage dendritic cell progenitor | 8.20e-29 | 61 |
classical monocyte | 2.19e-28 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.19e-28 | 42 |
monopoietic cell | 4.41e-26 | 59 |
monocyte | 4.41e-26 | 59 |
monoblast | 4.41e-26 | 59 |
promonocyte | 4.41e-26 | 59 |
granulocyte monocyte progenitor cell | 5.15e-26 | 67 |
myeloid leukocyte | 5.36e-24 | 72 |
myeloid lineage restricted progenitor cell | 4.50e-23 | 66 |
myeloid cell | 2.93e-17 | 108 |
common myeloid progenitor | 2.93e-17 | 108 |
hematopoietic lineage restricted progenitor cell | 2.48e-13 | 120 |
leukocyte | 4.32e-13 | 136 |
nongranular leukocyte | 3.65e-12 | 115 |
non-classical monocyte | 2.15e-11 | 3 |
CD14-low, CD16-positive monocyte | 2.15e-11 | 3 |
hematopoietic oligopotent progenitor cell | 1.38e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.38e-10 | 161 |
hematopoietic stem cell | 5.13e-10 | 168 |
hematopoietic cell | 2.38e-09 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.24e-22 | 76 |
bone element | 8.73e-21 | 82 |
skeletal element | 1.06e-18 | 90 |
immune system | 5.21e-18 | 93 |
hematopoietic system | 5.96e-17 | 98 |
blood island | 5.96e-17 | 98 |
skeletal system | 1.48e-16 | 100 |
hemolymphoid system | 3.99e-15 | 108 |
tongue | 2.64e-11 | 3 |
gustatory system | 2.64e-11 | 3 |
future tongue | 2.64e-11 | 3 |
musculoskeletal system | 8.95e-09 | 167 |
lateral plate mesoderm | 8.62e-08 | 203 |