FFCP PHASE1:Hg19::chr2:240189135..240189153,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:240189135..240189153,- to FFCP PHASE1:Hg19::chr2:240189135..240189153,-: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:240189135..240189153,- | |||
|coexpression_cluster_id=C451 | |||
|description=CAGE_peak_at_chr2:240189135..240189153,- | |||
|id=chr2:240189135..240189153,- | |||
|ontology_enrichment_celltype=CL:0000738!4.99e-46!140;CL:0002057!8.27e-42!42;CL:0000766!2.32e-41!76;CL:0002087!9.60e-41!119;CL:0000037!4.97e-40!172;CL:0000566!4.97e-40!172;CL:0002032!8.62e-39!165;CL:0000837!8.62e-39!165;CL:0000988!1.02e-38!182;CL:0000860!3.66e-38!45;CL:0002031!3.92e-38!124;CL:0000839!1.10e-33!70;CL:0002194!1.54e-33!63;CL:0000576!1.54e-33!63;CL:0000040!1.54e-33!63;CL:0000559!1.54e-33!63;CL:0000557!5.28e-33!71;CL:0002009!4.37e-32!65;CL:0000763!5.56e-31!112;CL:0000049!5.56e-31!112;CL:0002393!5.13e-13!9;CL:0002397!5.13e-13!9;CL:0000084!1.18e-12!25;CL:0000827!1.18e-12!25;CL:0000791!2.00e-09!18;CL:0000789!2.00e-09!18;CL:0002420!2.00e-09!18;CL:0002419!2.00e-09!18;CL:0000790!2.00e-09!18;CL:0000134!2.07e-08!358;CL:0002320!7.14e-08!365;CL:0000838!7.15e-08!52;CL:0000542!1.28e-07!53;CL:0000051!1.28e-07!53;CL:0000094!1.70e-07!8;CL:0000219!9.68e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000576;9.10e-25;48!CL:0000860;2.52e-23;33!CL:0002057;2.52e-23;33!CL:0002619;1.18e-17;3!CL:0000473;2.54e-16;39!CL:0000234;2.54e-16;39!CL:0000766;1.12e-12;69!CL:0000094;4.66e-11;8!CL:0002087;6.86e-09;104!CL:0000081;4.54e-08;11!CL:0000775;5.63e-08;3!CL:0000763;8.15e-08;100!CL:0000738;5.79e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,6.97e-32,72;CL:0000860,1.73e-26,42;CL:0002057,1.73e-26,42;CL:0002194,4.75e-26,59;CL:0000576,4.75e-26,59;CL:0000040,4.75e-26,59;CL:0000559,4.75e-26,59;CL:0002009,4.42e-25,61;CL:0000738,1.50e-23,136;CL:0000839,6.53e-23,66;CL:0000473,9.02e-23,48;CL:0000234,9.02e-23,48;CL:0000557,1.62e-22,67;CL:0002087,4.68e-20,115;CL:0000763,9.36e-20,108;CL:0000049,9.36e-20,108;CL:0002032,4.89e-19,161;CL:0000837,4.89e-19,161;CL:0002031,5.08e-19,120;CL:0000037,5.17e-18,168;CL:0002619,1.36e-17,3;CL:0000988,8.18e-17,177;CL:0000094,4.31e-11,8;CL:0000081,4.30e-08,11;CL:0000775,4.39e-08,3 | |||
|ontology_enrichment_development_v019=CL:0002057;2.89e-18;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4960;4.82e-07;1!DOID:0070004;4.82e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,4.97e-07,1;DOID:0070004,4.97e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.31e-40!102;UBERON:0003061!2.31e-40!102;UBERON:0002193!1.61e-36!112;UBERON:0002371!2.13e-29!80;UBERON:0001474!2.54e-26!86;UBERON:0002405!2.79e-23!115;UBERON:0004765!2.81e-20!101;UBERON:0001434!2.81e-20!101;UBERON:0003081!1.82e-11!216;UBERON:0002384!1.65e-07!375;UBERON:0002204!2.89e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.88e-22,76;UBERON:0001474,5.30e-20,82;UBERON:0002390,5.35e-20,98;UBERON:0003061,5.35e-20,98;UBERON:0002405,3.47e-19,93;UBERON:0004765,7.12e-18,90;UBERON:0002193,9.69e-18,108;UBERON:0001434,1.09e-15,100;UBERON:0002204,8.31e-08,167;UBERON:0003081,2.20e-07,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0.786728553697808,0.767658796194425,1.08371286321253,0,0,0,0,0,0,1.10799081706375,1.80490002723128,0.651032612147555,4.03047853631864,2.26725566213286,5.6666624879521,1.30858414901608,0.755751887377619,0.242584061187816,0.697287110717054,0.411167888021826,0,4.60307827715441,3.58624989140741,3.31075121844019,0.689491361473237,0,2.70852973188684,0.941211697713023,0.545812300115692,0.449446968890169,0.612167784741805,0.320929027076094,0.639337125799041,7.58657990429447,7.38015533200038,7.6720455095885,0.290209238628584,0,0,5.7787193009051,4.69334626578181,4.56096573880745,0,0,0.632924774881769,0.633765858935825,0.850417199860174,0.628975936525128,1.12328631146495,1.05123824989054,0.64290234678832,0.570025487482497,0.19891667719909,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0.196709770113833,0.786021525498329,1.02800749499755,4.01247588937627,0,0.946895611469467,0,1.55974639639243,1.17842362989935,1.99380505125259,1.89562704635511,3.5865569523189,3.38154303655683,0.493313713811028,0.552700035571697,0.579606171470105,0,0,0,1.13309342697566,0.383220493601921,0,1.26509846009751,0.318565414324097,0,0,0.752875595388864,0.511946444617674,0,0.236777252044017,0,0.201606743224732,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.6334079244498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0,0.148631162288728,0,0,0,0,0,0,0,0,0.207328115540772,0.432359860250884,0.25248486685276,0.317489471460845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12085143993527,0.985153801009636,1.07813787429759,0.385029108839245,0,0,0,0,0,1.49801404789436,0,1.24324654030811,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0.620304078368662,0.215714200818617,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0.952927101831156,0.822724546172388,0,1.08006287447623,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0.228234679033192,0,0,0,0.1605880751037,0.201799707191048,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0.824019371133798,0,0.19924798825107,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0.31396051279005,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0.123563938946503,0.208843899010911,0,0,0,0,0,0,0,0,0,1.01098527405581,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0.213452994739353,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0.788662062837943,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0.164185041498678,0,0.113312091520126,0,0,0,0,0,0,0.106787412567695,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0.122026264901963,0.250381861413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0.19998739585493,0.426766918776564,4.13315951185958,0,0,0,0,0,0,0,0,0.169732529954025,0,0.247871528518004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0.33883824611688,0,0,0,0,0,0,0,0,0,0,0,0.375935671919414,0.128915775947154,0,0,0,0,0,0.458729283404541,0.286679166302903,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0.258355639344024,0.0620747142958579,0,0,0,0.217716747896961,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0.786728553697808,0.767658796194425,1.08371286321253,0,0,0,0,0,0,1.10799081706375,1.80490002723128,0.651032612147555,4.03047853631864,2.26725566213286,5.6666624879521,1.30858414901608,0.755751887377619,0.242584061187816,0.697287110717054,0.411167888021826,0,4.60307827715441,3.58624989140741,3.31075121844019,0.689491361473237,0,2.70852973188684,0.941211697713023,0.545812300115692,0.449446968890169,0.612167784741805,0.320929027076094,0.639337125799041,7.58657990429447,7.38015533200038,7.6720455095885,0.290209238628584,0,0,5.7787193009051,4.69334626578181,4.56096573880745,0,0,0.632924774881769,0.633765858935825,0.850417199860174,0.628975936525128,1.12328631146495,1.05123824989054,0.64290234678832,0.570025487482497,0.19891667719909,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0.196709770113833,0.786021525498329,1.02800749499755,4.01247588937627,0,0.946895611469467,0,1.55974639639243,1.17842362989935,1.99380505125259,1.89562704635511,3.5865569523189,3.38154303655683,0.493313713811028,0.552700035571697,0.579606171470105,0,0,0,1.13309342697566,0.383220493601921,0,1.26509846009751,0.318565414324097,0,0,0.752875595388864,0.511946444617674,0,0.236777252044017,0,0.201606743224732,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.6334079244498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0,0.148631162288728,0,0,0,0,0,0,0,0,0.207328115540772,0.432359860250884,0.25248486685276,0.317489471460845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12085143993527,0.985153801009636,1.07813787429759,0.385029108839245,0,0,0,0,0,1.49801404789436,0,1.24324654030811,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0.620304078368662,0.215714200818617,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0.952927101831156,0.822724546172388,0,1.08006287447623,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0.228234679033192,0,0,0,0.1605880751037,0.201799707191048,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0.824019371133798,0,0.19924798825107,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0.31396051279005,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0.123563938946503,0.208843899010911,0,0,0,0,0,0,0,0,0,1.01098527405581,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0.213452994739353,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0.788662062837943,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0.164185041498678,0,0.113312091520126,0,0,0,0,0,0,0.106787412567695,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0.122026264901963,0.250381861413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0.19998739585493,0.426766918776564,4.13315951185958,0,0,0,0,0,0,0,0,0.169732529954025,0,0.247871528518004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0.33883824611688,0,0,0,0,0,0,0,0,0,0,0,0.375935671919414,0.128915775947154,0,0,0,0,0,0.458729283404541,0.286679166302903,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0.258355639344024,0.0620747142958579,0,0,0,0.217716747896961,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr2:240189135..240189153,- | |||
}} | }} |
Latest revision as of 08:22, 29 July 2015
Short description: | p@chr2:240189135..240189153, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:240189135..240189153, - |
Coexpression cluster: | C451_CD14_CD4_Eosinophils_Neutrophils_adult_Natural_CD8 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 6.97e-32 | 72 |
classical monocyte | 1.73e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.73e-26 | 42 |
monopoietic cell | 4.75e-26 | 59 |
monocyte | 4.75e-26 | 59 |
monoblast | 4.75e-26 | 59 |
promonocyte | 4.75e-26 | 59 |
macrophage dendritic cell progenitor | 4.42e-25 | 61 |
leukocyte | 1.50e-23 | 136 |
myeloid lineage restricted progenitor cell | 6.53e-23 | 66 |
defensive cell | 9.02e-23 | 48 |
phagocyte | 9.02e-23 | 48 |
granulocyte monocyte progenitor cell | 1.62e-22 | 67 |
nongranular leukocyte | 4.68e-20 | 115 |
myeloid cell | 9.36e-20 | 108 |
common myeloid progenitor | 9.36e-20 | 108 |
hematopoietic oligopotent progenitor cell | 4.89e-19 | 161 |
hematopoietic multipotent progenitor cell | 4.89e-19 | 161 |
hematopoietic lineage restricted progenitor cell | 5.08e-19 | 120 |
hematopoietic stem cell | 5.17e-18 | 168 |
adult endothelial progenitor cell | 1.36e-17 | 3 |
hematopoietic cell | 8.18e-17 | 177 |
granulocyte | 4.31e-11 | 8 |
blood cell | 4.30e-08 | 11 |
neutrophil | 4.39e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.88e-22 | 76 |
bone element | 5.30e-20 | 82 |
hematopoietic system | 5.35e-20 | 98 |
blood island | 5.35e-20 | 98 |
immune system | 3.47e-19 | 93 |
skeletal element | 7.12e-18 | 90 |
hemolymphoid system | 9.69e-18 | 108 |
skeletal system | 1.09e-15 | 100 |
musculoskeletal system | 8.31e-08 | 167 |
lateral plate mesoderm | 2.20e-07 | 203 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 4.97e-07 | 1 |
myeloma | 4.97e-07 | 1 |