FFCP PHASE1:Hg19::chr2:223288613..223288620,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:223288613..223288620,+ to FFCP PHASE1:Hg19::chr2:223288613..223288620,+: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=130367 | |EntrezGene=130367 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=19953 | |HGNC=19953 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IWX5 | |UniProt=Q8IWX5 | ||
|association_with_transcript=-150bp_to_AK096323_5end | |||
|cluster_id=chr2:223288613..223288620,+ | |||
|coexpression_cluster_id=C763 | |||
|description=CAGE_peak_13_at_SGPP2_5end | |||
|id=chr2:223288613..223288620,+ | |||
|ontology_enrichment_celltype=CL:0002087!2.52e-20!119;CL:0000542!3.84e-19!53;CL:0000051!3.84e-19!53;CL:0000838!1.81e-17!52;CL:0000738!5.22e-16!140;CL:0002031!3.51e-15!124;CL:0000945!2.17e-14!24;CL:0000826!2.17e-14!24;CL:0000988!2.06e-13!182;CL:0000080!2.50e-13!6;CL:0000037!1.69e-11!172;CL:0000566!1.69e-11!172;CL:0002032!1.75e-10!165;CL:0000837!1.75e-10!165 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.04e-13;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,9.12e-14,24;CL:0000826,9.12e-14,24;CL:0000988,9.13e-07,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060058!7.40e-08!10 | |||
|ontology_enrichment_disease_v019=DOID:630;2.08e-21;1!DOID:0050177;2.08e-21;1!DOID:0050427;2.08e-21;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,1.88e-21,1;DOID:0050177,1.88e-21,1;DOID:0050427,1.88e-21,1 | |||
|ontology_enrichment_uberon=UBERON:0002193!6.05e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;6.28e-09;10!UBERON:0002106;7.02e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,6.54e-09,10;UBERON:0000358,6.54e-09,10;UBERON:0000307,6.54e-09,10;UBERON:0000091,6.54e-09,10;UBERON:0000087,6.54e-09,10;UBERON:0007010,6.54e-09,10;UBERON:0007806,6.54e-09,10;UBERON:0008780,6.54e-09,10;UBERON:0005728,6.54e-09,10;UBERON:0002106,8.29e-08,3;UBERON:0004854,8.29e-08,3;UBERON:0009034,8.29e-08,3;UBERON:0002095,8.29e-08,3;UBERON:0004782,8.29e-08,3;UBERON:0003281,8.29e-08,3;UBERON:0009664,8.29e-08,3;UBERON:0002296,8.29e-08,3;UBERON:0005602,8.29e-08,3;UBERON:0001179,8.29e-08,3;UBERON:0006293,8.29e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.44522898393444,1.9704141467987,2.83358812729245,0,0,0,0,0,0,0,0.568676929949686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0.645484683583826,0,0.376484679085209,0,0,0,0,0,0,0,0,0.290209238628584,1.13477044938228,0,0,0,0.217188844705117,0.605399502633369,0.736555271975129,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0.196709770113833,0.393010762749165,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0.950452044448374,0,0.127986611154418,0,0.236777252044017,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509752546090077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.743212700502875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0.276283915531148,0,0,0.984678443688556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07564790076435,0.988511511572023,1.35748534357092,0.067401132980677,0,0,0,0,0,0,0,0,0,1.50323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846733320657845,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0.496166021811951,0.197611631897944,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.999936979274649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0.126831620387814,0,0,0,0,0,0,0,0,0,0,0.921871900446234,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0.11294608203896,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,1.09935271517422,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0.0636471582781649,0,0,0,0.134704106029175,0,0.332660356546013,0.0814032686109745,0,0,0,0,0,0,0,0.201273793591026,2.56454793842586 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.44522898393444,1.9704141467987,2.83358812729245,0,0,0,0,0,0,0,0.568676929949686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0.645484683583826,0,0.376484679085209,0,0,0,0,0,0,0,0,0.290209238628584,1.13477044938228,0,0,0,0.217188844705117,0.605399502633369,0.736555271975129,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0.196709770113833,0.393010762749165,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0.950452044448374,0,0.127986611154418,0,0.236777252044017,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509752546090077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.743212700502875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0.276283915531148,0,0,0.984678443688556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07564790076435,0.988511511572023,1.35748534357092,0.067401132980677,0,0,0,0,0,0,0,0,0,1.50323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846733320657845,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0.496166021811951,0.197611631897944,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.999936979274649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0.126831620387814,0,0,0,0,0,0,0,0,0,0,0.921871900446234,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0.11294608203896,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,1.09935271517422,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0.0636471582781649,0,0,0,0.134704106029175,0,0.332660356546013,0.0814032686109745,0,0,0,0,0,0,0,0.201273793591026,2.56454793842586 | ||
|short_description=p13@SGPP2 | |||
}} | }} |
Latest revision as of 23:23, 24 September 2015
Short description: | p13@SGPP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_SGPP2_5end |
Coexpression cluster: | C763_cord_B_splenic_xeroderma_b_hairy_mycosis |
Association with transcript: | -150bp_to_AK096323_5end |
EntrezGene: | SGPP2 |
HGNC: | 19953 |
UniProt: | Q8IWX5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 9.12e-14 | 24 |
pro-B cell | 9.12e-14 | 24 |
hematopoietic cell | 9.13e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 6.54e-09 | 10 |
blastocyst | 6.54e-09 | 10 |
blastula | 6.54e-09 | 10 |
bilaminar disc | 6.54e-09 | 10 |
inner cell mass | 6.54e-09 | 10 |
cleaving embryo | 6.54e-09 | 10 |
connecting stalk | 6.54e-09 | 10 |
inner cell mass derived epiblast | 6.54e-09 | 10 |
extraembryonic mesoderm | 6.54e-09 | 10 |
spleen | 8.29e-08 | 3 |
gastrointestinal system mesentery | 8.29e-08 | 3 |
stomach region | 8.29e-08 | 3 |
mesentery | 8.29e-08 | 3 |
gastrointestinal system serosa | 8.29e-08 | 3 |
mesentery of stomach | 8.29e-08 | 3 |
gut mesentery | 8.29e-08 | 3 |
dorsal mesentery | 8.29e-08 | 3 |
dorsal mesogastrium | 8.29e-08 | 3 |
peritoneal cavity | 8.29e-08 | 3 |
spleen primordium | 8.29e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 1.88e-21 | 1 |
monogenic disease | 1.88e-21 | 1 |
xeroderma pigmentosum | 1.88e-21 | 1 |