FFCP PHASE1:Hg19::chr2:218802260..218802273,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7145 | |EntrezGene=7145 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11973 | |HGNC=11973 | ||
|TSSclassifier=strong | |||
|UniProt=C9J8K5 | |UniProt=C9J8K5 | ||
|association_with_transcript=-375bp_to_ENST00000423413_5end | |||
|cluster_id=chr2:218802260..218802273,- | |||
|description=CAGE_peak_30_at_TNS1_5end | |||
|id=chr2:218802260..218802273,- | |||
|ontology_enrichment_celltype=CL:0000071!6.09e-09!18;CL:0002546!6.09e-09!18;CL:0002594!3.02e-07!4 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005062;7.61e-22;4!UBERON:0007284;7.61e-22;4!UBERON:0004872;6.20e-13;7!UBERON:0000358;2.93e-11;1!UBERON:0004140;8.20e-11;1!UBERON:0006603;6.28e-07;65 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:8552;2.93e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:8552,3.08e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0004872!6.94e-18!84;UBERON:0001981!9.28e-17!60;UBERON:0007500!9.28e-17!60;UBERON:0004537!9.28e-17!60;UBERON:0006965!9.28e-17!60;UBERON:0002049!1.95e-15!79;UBERON:0007798!1.95e-15!79;UBERON:0001009!1.27e-14!113;UBERON:0000055!2.20e-13!69;UBERON:0004535!1.85e-12!110;UBERON:0003914!4.89e-12!118;UBERON:0007023!8.08e-10!115;UBERON:0001986!6.09e-09!18;UBERON:0004638!6.09e-09!18;UBERON:0004852!6.09e-09!18;UBERON:0000966!1.27e-08!5;UBERON:0005388!1.27e-08!5;UBERON:0001802!1.27e-08!5;UBERON:0001637!2.19e-08!42;UBERON:0003509!2.19e-08!42;UBERON:0004572!2.19e-08!42;UBERON:0000487!2.84e-08!22;UBERON:0000119!3.92e-08!312;UBERON:0007625!5.05e-08!11;UBERON:0000483!5.76e-08!309;UBERON:0000025!9.77e-08!194;UBERON:0001310!3.02e-07!4;UBERON:0000970!3.12e-07!20;UBERON:0006914!6.33e-07!25;UBERON:0002104!9.06e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0003978;6.86e-29;3!UBERON:0000946;6.86e-29;3!UBERON:0002133;7.17e-20;2!UBERON:0007100;3.38e-13;25!UBERON:0002135;8.20e-11;1!UBERON:0002146;8.20e-11;1!UBERON:0002134;8.20e-11;1!UBERON:0005208;8.20e-11;1!UBERON:0005623;8.20e-11;1!UBERON:0004145;8.20e-11;1!UBERON:0005946;8.20e-11;1!UBERON:0005965;8.20e-11;1!UBERON:0002078;8.20e-11;1!UBERON:0000948;1.21e-10;22!UBERON:0010313;4.37e-09;10!UBERON:0000966;1.66e-08;5!UBERON:0005388;1.66e-08;5!UBERON:0001802;1.66e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,1.98e-29,3;UBERON:0009751,1.98e-29,3;UBERON:0000946,1.98e-29,3;UBERON:0002523,1.98e-29,3;UBERON:0005983,1.98e-29,3;UBERON:0002165,1.98e-29,3;UBERON:0002062,1.98e-29,3;UBERON:0007280,1.98e-29,3;UBERON:0002133,2.26e-20,2;UBERON:0004797,5.61e-13,7;UBERON:0007100,3.44e-12,27;UBERON:0002135,3.76e-11,1;UBERON:0002134,5.57e-11,1;UBERON:0005208,5.57e-11,1;UBERON:0005946,5.57e-11,1;UBERON:0005965,5.57e-11,1;UBERON:0002078,5.57e-11,1;UBERON:0002146,7.46e-11,1;UBERON:0005623,7.46e-11,1;UBERON:0000948,9.42e-10,24;UBERON:0005498,9.42e-10,24;UBERON:0004140,9.42e-10,24;UBERON:0009881,9.42e-10,24;UBERON:0004141,9.42e-10,24;UBERON:0003084,9.42e-10,24;UBERON:0007005,9.42e-10,24;UBERON:0004139,9.42e-10,24;UBERON:0004291,9.42e-10,24;UBERON:0010313,3.04e-09,10;UBERON:0002342,3.04e-09,10;UBERON:0005062,3.04e-09,10;UBERON:0000966,3.36e-07,6;UBERON:0005388,3.36e-07,6;UBERON:0001802,3.36e-07,6 | |||
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| ||
|short_description=p30@TNS1 | |||
}} | }} |
Latest revision as of 15:20, 24 September 2015
Short description: | p30@TNS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_30_at_TNS1_5end |
Coexpression cluster: | NA |
Association with transcript: | -375bp_to_ENST00000423413_5end |
EntrezGene: | TNS1 |
HGNC: | 11973 |
UniProt: | C9J8K5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
valve | 1.98e-29 | 3 |
cardiac mesenchyme | 1.98e-29 | 3 |
cardial valve | 1.98e-29 | 3 |
tunica intima | 1.98e-29 | 3 |
heart layer | 1.98e-29 | 3 |
endocardium | 1.98e-29 | 3 |
endocardial cushion | 1.98e-29 | 3 |
presumptive endocardium | 1.98e-29 | 3 |
atrioventricular valve | 2.26e-20 | 2 |
blood vessel layer | 5.61e-13 | 7 |
primary circulatory organ | 3.44e-12 | 27 |
mitral valve | 3.76e-11 | 1 |
tricuspid valve | 5.57e-11 | 1 |
right atrium valve | 5.57e-11 | 1 |
outflow tract of atrium | 5.57e-11 | 1 |
outflow part of right atrium | 5.57e-11 | 1 |
right cardiac atrium | 5.57e-11 | 1 |
pulmonary valve | 7.46e-11 | 1 |
semi-lunar valve | 7.46e-11 | 1 |
heart | 9.42e-10 | 24 |
primitive heart tube | 9.42e-10 | 24 |
primary heart field | 9.42e-10 | 24 |
anterior lateral plate mesoderm | 9.42e-10 | 24 |
heart tube | 9.42e-10 | 24 |
heart primordium | 9.42e-10 | 24 |
cardiac mesoderm | 9.42e-10 | 24 |
cardiogenic plate | 9.42e-10 | 24 |
heart rudiment | 9.42e-10 | 24 |
neural crest-derived structure | 3.04e-09 | 10 |
neural crest | 3.04e-09 | 10 |
neural fold | 3.04e-09 | 10 |
retina | 3.36e-07 | 6 |
photoreceptor array | 3.36e-07 | 6 |
posterior segment of eyeball | 3.36e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
chronic myeloid leukemia | 3.08e-11 | 1 |