FFCP PHASE1:Hg19::chr2:204192989..204193038,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:204192989..204193038,+ to FFCP PHASE1:Hg19::chr2:204192989..204193038,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10152 | |EntrezGene=10152 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24011 | |HGNC=24011 | ||
|TSSclassifier=strong | |||
|UniProt=F8WAZ8,Q9NYB9 | |UniProt=F8WAZ8,Q9NYB9 | ||
|association_with_transcript=0bp_to_ENST00000261017,ENST00000447762,NM_005759,uc002uzz.2,uc002vaa.2,uc010zig.1,uc010zih.1,uc010zii.1,uc010zij.1_5end | |||
|cluster_id=chr2:204192989..204193038,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_ABI2_5end | |||
|id=chr2:204192989..204193038,+ | |||
|ontology_enrichment_celltype=CL:0000133!1.63e-08!59;CL:0000055!8.26e-08!180;CL:0002319!2.60e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0002319;2.26e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000133,1.63e-08,59;CL:0002319,2.60e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.65e-10;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!8.66e-39!94;UBERON:0001016!8.66e-39!94;UBERON:0002346!5.15e-37!90;UBERON:0005743!1.80e-36!86;UBERON:0003075!1.85e-36!86;UBERON:0007284!1.85e-36!86;UBERON:0001017!5.28e-36!82;UBERON:0000924!1.41e-32!173;UBERON:0006601!1.41e-32!173;UBERON:0004121!9.89e-32!169;UBERON:0001049!6.94e-31!57;UBERON:0005068!6.94e-31!57;UBERON:0006241!6.94e-31!57;UBERON:0007135!6.94e-31!57;UBERON:0000955!2.89e-30!69;UBERON:0006238!2.89e-30!69;UBERON:0002616!2.60e-28!59;UBERON:0000153!3.83e-27!129;UBERON:0007811!3.83e-27!129;UBERON:0000033!1.49e-26!123;UBERON:0003056!5.55e-26!61;UBERON:0002780!7.42e-24!41;UBERON:0001890!7.42e-24!41;UBERON:0006240!7.42e-24!41;UBERON:0003080!1.61e-23!42;UBERON:0000475!1.89e-23!365;UBERON:0007023!2.34e-22!115;UBERON:0000481!2.75e-21!347;UBERON:0000119!3.19e-21!312;UBERON:0000483!1.56e-20!309;UBERON:0001893!7.75e-20!34;UBERON:0002020!1.33e-19!34;UBERON:0003528!1.33e-19!34;UBERON:0000477!2.32e-19!286;UBERON:0002791!3.65e-19!33;UBERON:0001869!7.73e-19!32;UBERON:0000025!1.48e-17!194;UBERON:0004111!3.11e-17!241;UBERON:0000956!2.48e-14!25;UBERON:0000203!2.48e-14!25;UBERON:0002619!2.37e-13!22;UBERON:0000468!1.07e-12!659;UBERON:0001950!3.16e-12!20;UBERON:0000922!5.83e-12!612;UBERON:0000064!1.01e-11!219;UBERON:0002050!4.68e-10!605;UBERON:0005423!4.68e-10!605;UBERON:0000467!7.39e-10!625;UBERON:0000923!8.66e-10!604;UBERON:0005291!8.66e-10!604;UBERON:0006598!8.66e-10!604;UBERON:0002532!8.66e-10!604;UBERON:0000480!1.08e-09!626;UBERON:0003076!1.82e-08!15;UBERON:0003057!1.82e-08!15;UBERON:0000062!7.40e-08!511;UBERON:0004732!1.28e-07!13;UBERON:0004733!5.68e-07!12;UBERON:0002028!5.68e-07!12;UBERON:0007277!5.68e-07!12;UBERON:0002420!8.60e-07!9;UBERON:0007245!8.60e-07!9;UBERON:0010009!8.60e-07!9;UBERON:0010011!8.60e-07!9;UBERON:0000454!8.60e-07!9;UBERON:0002308!9.23e-07!9;UBERON:0000125!9.23e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;2.74e-17;53!UBERON:0002616;2.74e-17;53!UBERON:0001893;2.82e-17;34!UBERON:0002780;3.25e-17;41!UBERON:0001890;3.25e-17;41!UBERON:0001869;5.62e-17;32!UBERON:0003528;6.41e-17;34!UBERON:0002020;6.41e-17;34!UBERON:0002791;8.57e-17;32!UBERON:0001017;2.32e-14;75!UBERON:0000956;2.66e-14;25!UBERON:0000203;2.66e-14;25!UBERON:0000955;3.01e-14;68!UBERON:0001016;1.30e-13;83!UBERON:0002619;2.48e-13;22!UBERON:0001950;3.30e-12;20!UBERON:0004732;1.22e-07;13!UBERON:0007023;1.66e-07;114!UBERON:0010314;3.28e-07;132!UBERON:0004733;5.42e-07;12!UBERON:0002028;5.42e-07;12!UBERON:0002420;8.43e-07;9!UBERON:0007245;8.43e-07;9!UBERON:0010009;8.43e-07;9!UBERON:0010011;8.43e-07;9!UBERON:0000454;8.43e-07;9!UBERON:0000125;9.14e-07;9!UBERON:0002308;9.14e-07;9 | |||
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04392 | ||
|short_description=p1@ABI2 | |||
}} | }} |
Latest revision as of 15:27, 19 September 2015
Short description: | p1@ABI2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ABI2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000261017, ENST00000447762, NM_005759, uc002uzz.2, uc002vaa.2, uc010zig.1, uc010zih.1, uc010zii.1, uc010zij.1_5end |
EntrezGene: | ABI2 |
HGNC: | 24011 |
UniProt: | F8WAZ8Q9NYB9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectodermal cell | 1.63e-08 | 59 |
neural cell | 2.60e-07 | 25 |