FFCP PHASE1:Hg19::chr2:202047828..202047841,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:202047828..202047841,+ to FFCP PHASE1:Hg19::chr2:202047828..202047841,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=843 | |EntrezGene=843 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1500 | |HGNC=1500 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000460140_5end | |||
|cluster_id=chr2:202047828..202047841,+ | |||
|description=CAGE_peak_2_at_CASP10_5end | |||
|id=chr2:202047828..202047841,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.53e-24!172;CL:0000566!1.53e-24!172;CL:0002032!9.45e-23!165;CL:0000837!9.45e-23!165;CL:0000988!9.07e-21!182;CL:0002031!4.18e-20!124;CL:0000738!4.26e-20!140;CL:0002087!1.47e-18!119;CL:0000763!5.19e-16!112;CL:0000049!5.19e-16!112;CL:0000839!3.99e-15!70;CL:0000557!3.63e-13!71;CL:0002194!1.91e-12!63;CL:0000576!1.91e-12!63;CL:0000040!1.91e-12!63;CL:0000559!1.91e-12!63;CL:0000766!7.70e-12!76;CL:0002009!1.06e-11!65;CL:0002057!4.12e-08!42;CL:0000860!4.98e-08!45;CL:0000134!3.66e-07!358;CL:0002139!4.22e-07!24;CL:0000542!9.84e-07!53;CL:0000051!9.84e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0002139;4.77e-08;24!CL:0000576;2.02e-07;48!CL:0000473;3.46e-07;39!CL:0000234;3.46e-07;39!CL:0000115;5.46e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,7.80e-26,168;CL:0002032,4.63e-24,161;CL:0000837,4.63e-24,161;CL:0000988,2.62e-22,177;CL:0000738,2.13e-21,136;CL:0002031,1.27e-20,120;CL:0002087,1.42e-18,115;CL:0000763,5.45e-17,108;CL:0000049,5.45e-17,108;CL:0000839,1.14e-15,66;CL:0000557,1.45e-13,67;CL:0000766,6.87e-13,72;CL:0002194,1.77e-12,59;CL:0000576,1.77e-12,59;CL:0000040,1.77e-12,59;CL:0000559,1.77e-12,59;CL:0002009,1.56e-11,61;CL:0000473,9.48e-10,48;CL:0000234,9.48e-10,48;CL:0002139,1.44e-08,24;CL:0000115,2.11e-08,36;CL:0000860,1.95e-07,42;CL:0002057,1.95e-07,42;CL:0000542,4.94e-07,53;CL:0000051,4.94e-07,53;CL:0000838,7.59e-07,52 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.90e-17!112;UBERON:0002405!2.20e-15!115;UBERON:0002390!1.14e-14!102;UBERON:0003061!1.14e-14!102;UBERON:0002371!6.78e-10!80;UBERON:0003081!1.97e-07!216;UBERON:0001474!3.42e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,4.64e-20,108;UBERON:0002405,4.37e-17,93;UBERON:0002390,4.85e-17,98;UBERON:0003061,4.85e-17,98;UBERON:0002371,6.26e-11,76;UBERON:0003081,4.54e-09,203;UBERON:0001474,7.10e-09,82;UBERON:0004765,8.70e-08,90 | |||
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| ||
|short_description=p2@CASP10 | |||
}} | }} |
Latest revision as of 12:48, 19 September 2015
Short description: | p2@CASP10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CASP10_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000460140_5end |
EntrezGene: | CASP10 |
HGNC: | 1500 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 7.80e-26 | 168 |
hematopoietic oligopotent progenitor cell | 4.63e-24 | 161 |
hematopoietic multipotent progenitor cell | 4.63e-24 | 161 |
hematopoietic cell | 2.62e-22 | 177 |
leukocyte | 2.13e-21 | 136 |
hematopoietic lineage restricted progenitor cell | 1.27e-20 | 120 |
nongranular leukocyte | 1.42e-18 | 115 |
myeloid cell | 5.45e-17 | 108 |
common myeloid progenitor | 5.45e-17 | 108 |
myeloid lineage restricted progenitor cell | 1.14e-15 | 66 |
granulocyte monocyte progenitor cell | 1.45e-13 | 67 |
myeloid leukocyte | 6.87e-13 | 72 |
monopoietic cell | 1.77e-12 | 59 |
monocyte | 1.77e-12 | 59 |
monoblast | 1.77e-12 | 59 |
promonocyte | 1.77e-12 | 59 |
macrophage dendritic cell progenitor | 1.56e-11 | 61 |
defensive cell | 9.48e-10 | 48 |
phagocyte | 9.48e-10 | 48 |
endothelial cell of vascular tree | 1.44e-08 | 24 |
endothelial cell | 2.11e-08 | 36 |
classical monocyte | 1.95e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.95e-07 | 42 |
lymphocyte | 4.94e-07 | 53 |
common lymphoid progenitor | 4.94e-07 | 53 |
lymphoid lineage restricted progenitor cell | 7.59e-07 | 52 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 4.64e-20 | 108 |
immune system | 4.37e-17 | 93 |
hematopoietic system | 4.85e-17 | 98 |
blood island | 4.85e-17 | 98 |
bone marrow | 6.26e-11 | 76 |
lateral plate mesoderm | 4.54e-09 | 203 |
bone element | 7.10e-09 | 82 |
skeletal element | 8.70e-08 | 90 |