FFCP PHASE1:Hg19::chr2:191878812..191878823,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:191878812..191878823,- to FFCP PHASE1:Hg19::chr2:191878812..191878823,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6772 | |EntrezGene=6772 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11362 | |HGNC=11362 | ||
|TSSclassifier=strong | |||
|UniProt=P42224 | |UniProt=P42224 | ||
|association_with_transcript=70bp_to_ENST00000392322_5end | |||
|cluster_id=chr2:191878812..191878823,- | |||
|description=CAGE_peak_2_at_STAT1_5end | |||
|id=chr2:191878812..191878823,- | |||
|ontology_enrichment_celltype=CL:0002057!3.11e-20!42;CL:0000860!1.80e-17!45;CL:0000766!4.54e-15!76;CL:0000048!1.00e-14!430;CL:0002194!1.09e-14!63;CL:0000576!1.09e-14!63;CL:0000040!1.09e-14!63;CL:0000559!1.09e-14!63;CL:0000723!1.45e-14!436;CL:0000034!5.38e-14!444;CL:0002009!2.23e-13!65;CL:0000134!2.83e-13!358;CL:0002320!8.06e-12!365;CL:0000557!1.09e-11!71;CL:0000839!2.16e-11!70;CL:0000738!8.09e-11!140;CL:0000219!1.05e-10!390;CL:0002087!2.45e-10!119;CL:0000012!5.34e-09!682;CL:0000144!9.20e-09!625;CL:0002371!9.55e-09!591;CL:0000548!1.26e-08!679;CL:0000004!1.26e-08!679;CL:0000255!1.26e-08!679;CL:0000063!3.39e-08!578;CL:0000003!3.94e-08!722;CL:0002031!1.61e-07!124;CL:0000988!5.13e-07!182;CL:0000763!5.26e-07!112;CL:0000049!5.26e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.78e-23;33!CL:0002057;1.78e-23;33!CL:0000473;5.31e-17;39!CL:0000234;5.31e-17;39!CL:0000576;9.92e-15;48!CL:0000766;1.06e-09;69!CL:0000081;9.55e-09;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.05e-27,42;CL:0002057,1.05e-27,42;CL:0000473,2.91e-24,48;CL:0000234,2.91e-24,48;CL:0000766,1.47e-18,72;CL:0002194,6.92e-17,59;CL:0000576,6.92e-17,59;CL:0000040,6.92e-17,59;CL:0000559,6.92e-17,59;CL:0002009,5.94e-16,61;CL:0000557,2.23e-14,67;CL:0000839,6.98e-14,66;CL:0000134,2.71e-13,354;CL:0002320,1.90e-12,361;CL:0000048,8.68e-12,427;CL:0000034,1.19e-11,441;CL:0000723,1.47e-11,433;CL:0000738,7.19e-11,136;CL:0000763,1.55e-10,108;CL:0000049,1.55e-10,108;CL:0000219,5.40e-10,386;CL:0002087,2.02e-09,115;CL:0000988,7.24e-09,177;CL:0000081,1.28e-08,11;CL:0002031,1.34e-07,120;CL:0000037,2.00e-07,168;CL:0002032,4.70e-07,161;CL:0000837,4.70e-07,161 | |||
|ontology_enrichment_development_v019=CL:0002057;1.37e-19;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.12e-14!102;UBERON:0003061!5.12e-14!102;UBERON:0002193!4.23e-13!112;UBERON:0002384!2.51e-11!375;UBERON:0002371!1.01e-10!80;UBERON:0004765!1.89e-10!101;UBERON:0001434!1.89e-10!101;UBERON:0001474!2.32e-10!86;UBERON:0002204!1.46e-09!167;UBERON:0003081!9.97e-08!216;UBERON:0002405!3.19e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.57e-16,98;UBERON:0003061,4.57e-16,98;UBERON:0002193,6.57e-14,108;UBERON:0002371,4.34e-13,76;UBERON:0002384,9.17e-12,371;UBERON:0001434,1.40e-11,100;UBERON:0001474,2.78e-11,82;UBERON:0002405,3.25e-11,93;UBERON:0004765,7.12e-11,90;UBERON:0003081,3.00e-10,203;UBERON:0002204,6.90e-09,167 | |||
|phase1_expression=0.908391896352783,1.07050261945492,0.986680828671798,0,0,0.872338524100369,0,0,0.522371256399677,0.245733936501509,0,0,0,0,0,0,1.20538905604795,0.730310090387373,0,0.123121058076788,0,0,0.286235987131057,0.136874425072884,0.627713197974014,3.43860325865781,2.29881650459848,4.09296062831132,1.18009283054671,0,0.928896739896456,0.919421224478927,0,0,0.154934401160603,0.142169232487422,0.293600439334847,2.21598163412751,1.20326668482085,1.51907609501096,0.447830948479849,0,0.515151135268373,0.726991193897824,0.755751887377619,1.21292030593908,1.39457422143411,0.822335776043652,0.929119112685311,8.34307937734236,7.42866048934392,12.0605937243178,3.7922024881028,1.29096936716765,5.41705946377367,1.12945403725563,1.91034305040492,1.57306439111559,13.7737751566906,9.9487998393589,7.67204550958849,7.91643120448119,5.58498241340569,4.68847225585964,11.0279510678862,3.97169657283798,9.34233373493363,5.7787193009051,8.86520961314342,6.73285418585862,23.6105806027014,12.8897172595648,18.3548184715713,1.05627643155971,0.850417199860174,2.30624510059213,1.68492946719743,1.80212271409808,3.2145117339416,0.285012743741249,1.19350006319454,0.365328307529268,0,0,0,0,0,0.574752439954483,0,0,0.569212969109448,0,0,1.32171328579026,2.24203425192614,0,0.393419540227666,0,0.616804496998528,0,0.32592226663359,0,0,0.445641827540694,0,0.886135578334485,0,0.384273959177026,0.390178042679635,0.657751618414705,0.276350017785848,0,0.296573126324121,0,0,0.339928028092699,0,1.37450978193052,0.253019692019503,0.637130828648193,0,0.950452044448374,0.150575119077773,0.511946444617674,0,0.710331756132051,0.821127996921047,1.20964045934839,0.267440195783507,0.144824403882799,0,0.670700859703636,0.383587685530591,3.61439152384566,2.00535164254356,3.33146993609895,0,1.45990461090791,0.189069634328136,0.221729397462564,0.175669571386252,0.196468613246569,0,0,0.324547393654683,0.348259474598534,0.531831842075461,0.715471872916026,2.85997455390064,0,0.198762407366705,0,0,0,0,0,0.417989933073621,0,0.35576626268671,0.33472061276467,0,0.760272105718513,0.976248230192678,0,0,0.803697554556718,0.44905874525234,0.225222960966644,1.53316637465883,0,0.183201743930407,6.58902087180316,11.6334079244498,0,1.49091585508596,1.39293562831038,5.42877641334197,0,0.354668382198357,1.68203280042692,0,0.49333509683432,1.24484414159907,0.134710672069688,0.163461903113459,0,0,0.234321431833797,0.312160076830321,0.570471821544449,0.448346041655403,0.117434498643765,0,0,0.408308342509787,0,0,17.8200428592308,5.43987244412825,0,0,0,0.125118519871964,0.831192346452549,1.31693286264251,3.0648779579902,5.70904623845068,0.567160915800105,1.25572744982203,1.92201649936711,1.69545520927649,1.20036438433761,1.54578793857658,3.60696756063881,1.11670113798954,0.506328996723799,0.194874010322397,1.7670364197088,3.77404584433427,0.646584227275248,0.710019185033229,0.604512589365842,0.508681776931463,0,0.818238361772504,0.286804595389004,0,0,0,0.518305275076852,0,0,3.12899064659632,2.57296375277154,0,0.464367928031979,2.88751792667834,0.118306800039844,0.337169380156203,0,0.441175890929576,0.217879444092406,0.237270619111097,0.674156540800822,0.588664395376038,0.38474715694639,0,0,0,0,0,0,0.590789906681404,0.441463099414651,0.860919069801795,0.343135620597051,0,1.1240175325762,0.603173834469785,0.185176890317059,1.95484983186195,0,0,0.231860809950154,0.352226082707465,0.721832238805369,1.38895653772983,0.761016608938393,0,0,0.246217006087397,0.702012795417713,0.297262324577456,0,2.68771405118175,3.68615252830205,0.268675568108545,0.290633938513962,0,0,0.264145302039678,0,0.288239906833923,0,0.63497894292169,0.381988425558278,0,0,0.205654985406647,0.901029173531752,1.71495859578347,0,0,0,1.03417372606222,0,0,0.531876233169741,2.08014873822732,0,0,0,0,0,0,1.30294473717494,0.355391948742546,0,0.301439377059586,3.48613383440118,0.699810938274399,2.43247561282381,0.502257091432126,0,3.35474797688216,3.44585807502342,0,3.32997005335432,0.410952645100767,0.537182889719687,0.448340575974109,0.591092280605782,0.646882724578552,0.641715181398742,0.508189248444927,0,0.773288812777695,0.167516265334349,0.637938751653163,8.23907726341901,8.97484377612075,6.63064821497657,0,0,0,1.45579603071565,1.42743191037729,0.315404830067869,0.468565659970853,1.20378439891088,0,0,1.32845119707087,0.553107505625109,0.60818530127658,0,0.343143423810856,0.620304078368662,1.07857100409308,1.06727557803444,0,0,0.30239029332968,0.992431231275107,2.60885354589706,1.12264037773229,1.02511319404561,2.04682899626681,0.965123526861645,0,1.69630663182921,0.532685175939381,0.9033987161519,2.07701771673448,1.16210378459959,0.846016147141356,0,0,1.37777337797528,0.546273504020151,1.31124414959424,0,0.15403067420883,0,0,1.37217117560738,0,0,0,1.54227252690289,0.541892875087706,0,1.01950509218015,1.66215201785745,0.223874754722178,0,0,0,0.656029291399411,0,0.206082023295445,0.366277859273374,0.330037999682352,0.574265537996172,0,1.6068392984416,0.386682873168488,0.308097234229289,0,0,0.644521469209642,0.72508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| ||
|short_description=p2@STAT1 | |||
}} | }} |
Latest revision as of 04:01, 19 September 2015
Short description: | p2@STAT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_STAT1_5end |
Coexpression cluster: | NA |
Association with transcript: | 70bp_to_ENST00000392322_5end |
EntrezGene: | STAT1 |
HGNC: | 11362 |
UniProt: | P42224 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.05e-27 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.05e-27 | 42 |
defensive cell | 2.91e-24 | 48 |
phagocyte | 2.91e-24 | 48 |
myeloid leukocyte | 1.47e-18 | 72 |
monopoietic cell | 6.92e-17 | 59 |
monocyte | 6.92e-17 | 59 |
monoblast | 6.92e-17 | 59 |
promonocyte | 6.92e-17 | 59 |
macrophage dendritic cell progenitor | 5.94e-16 | 61 |
granulocyte monocyte progenitor cell | 2.23e-14 | 67 |
myeloid lineage restricted progenitor cell | 6.98e-14 | 66 |
mesenchymal cell | 2.71e-13 | 354 |
connective tissue cell | 1.90e-12 | 361 |
multi fate stem cell | 8.68e-12 | 427 |
stem cell | 1.19e-11 | 441 |
somatic stem cell | 1.47e-11 | 433 |
leukocyte | 7.19e-11 | 136 |
myeloid cell | 1.55e-10 | 108 |
common myeloid progenitor | 1.55e-10 | 108 |
motile cell | 5.40e-10 | 386 |
nongranular leukocyte | 2.02e-09 | 115 |
hematopoietic cell | 7.24e-09 | 177 |
blood cell | 1.28e-08 | 11 |
hematopoietic lineage restricted progenitor cell | 1.34e-07 | 120 |
hematopoietic stem cell | 2.00e-07 | 168 |
hematopoietic oligopotent progenitor cell | 4.70e-07 | 161 |
hematopoietic multipotent progenitor cell | 4.70e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.57e-16 | 98 |
blood island | 4.57e-16 | 98 |
hemolymphoid system | 6.57e-14 | 108 |
bone marrow | 4.34e-13 | 76 |
connective tissue | 9.17e-12 | 371 |
skeletal system | 1.40e-11 | 100 |
bone element | 2.78e-11 | 82 |
immune system | 3.25e-11 | 93 |
skeletal element | 7.12e-11 | 90 |
lateral plate mesoderm | 3.00e-10 | 203 |
musculoskeletal system | 6.90e-09 | 167 |