FFCP PHASE1:Hg19::chr2:191272847..191272868,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:191272847..191272868,+ to FFCP PHASE1:Hg19::chr2:191272847..191272868,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54842 | |EntrezGene=54842 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24711 | |HGNC=24711 | ||
|TSSclassifier=strong | |||
|UniProt=Q6ZSS7,C9JAZ7,C9J134 | |UniProt=Q6ZSS7,C9JAZ7,C9J134 | ||
|association_with_transcript=-212bp_to_ENST00000392328,ENST00000417958,ENST00000432036,NM_017694,uc002urz.2_5end | |||
|cluster_id=chr2:191272847..191272868,+ | |||
|description=CAGE_peak_4_at_MFSD6_5end | |||
|id=chr2:191272847..191272868,+ | |||
|ontology_enrichment_celltype=CL:0000838!2.63e-11!52;CL:0000542!5.77e-11!53;CL:0000051!5.77e-11!53;CL:0000791!4.46e-09!18;CL:0000789!4.46e-09!18;CL:0002420!4.46e-09!18;CL:0002419!4.46e-09!18;CL:0000790!4.46e-09!18;CL:0000084!1.34e-07!25;CL:0000827!1.34e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000791;5.51e-13;18!CL:0000789;5.51e-13;18!CL:0002419;5.51e-13;18!CL:0000084;1.17e-09;25!CL:0000625;3.39e-09;11!CL:0000542;2.72e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,4.00e-13,52;CL:0000791,4.65e-13,18;CL:0000789,4.65e-13,18;CL:0002420,4.65e-13,18;CL:0002419,4.65e-13,18;CL:0000790,4.65e-13,18;CL:0000542,1.19e-12,53;CL:0000051,1.19e-12,53;CL:0000084,8.66e-10,25;CL:0000827,8.66e-10,25;CL:0000625,2.03e-09,11 | |||
|ontology_enrichment_development_v019=CL:0000790;5.51e-13;18!UBERON:0006601;7.91e-11;82!CL:0000051;2.72e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.14e-30!115;UBERON:0001049!1.28e-19!57;UBERON:0005068!1.28e-19!57;UBERON:0006241!1.28e-19!57;UBERON:0007135!1.28e-19!57;UBERON:0002780!9.76e-18!41;UBERON:0001890!9.76e-18!41;UBERON:0006240!9.76e-18!41;UBERON:0003080!1.06e-16!42;UBERON:0002616!2.09e-16!59;UBERON:0000955!4.09e-16!69;UBERON:0006238!4.09e-16!69;UBERON:0003075!1.23e-14!86;UBERON:0007284!1.23e-14!86;UBERON:0002020!1.99e-14!34;UBERON:0003528!1.99e-14!34;UBERON:0001893!2.20e-14!34;UBERON:0005743!3.64e-14!86;UBERON:0001017!3.80e-14!82;UBERON:0002346!6.94e-14!90;UBERON:0001869!8.58e-14!32;UBERON:0002791!9.79e-14!33;UBERON:0000153!3.54e-13!129;UBERON:0007811!3.54e-13!129;UBERON:0002619!2.10e-12!22;UBERON:0000073!5.05e-12!94;UBERON:0001016!5.05e-12!94;UBERON:0000033!8.98e-12!123;UBERON:0003056!1.19e-11!61;UBERON:0001950!3.07e-11!20;UBERON:0004121!1.10e-10!169;UBERON:0000956!1.67e-10!25;UBERON:0000203!1.67e-10!25;UBERON:0000924!2.27e-10!173;UBERON:0006601!2.27e-10!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.86e-18;41!UBERON:0001890;1.86e-18;41!UBERON:0002619;2.73e-18;22!UBERON:0001869;7.98e-18;32!UBERON:0001893;8.21e-18;34!UBERON:0003528;1.25e-17;34!UBERON:0002020;1.25e-17;34!UBERON:0002791;2.58e-17;32!UBERON:0000073;6.23e-17;53!UBERON:0002616;6.23e-17;53!UBERON:0001950;1.32e-16;20!UBERON:0000956;3.72e-15;25!UBERON:0000203;3.72e-15;25!UBERON:0000955;2.45e-12;68!UBERON:0001017;7.88e-12;75!UBERON:0007023;1.91e-10;114!UBERON:0001016;4.80e-09;83!UBERON:0000200;1.76e-07;6!UBERON:0002420;2.22e-07;9!UBERON:0007245;2.22e-07;9!UBERON:0010009;2.22e-07;9!UBERON:0010011;2.22e-07;9!UBERON:0000454;2.22e-07;9!UBERON:0000125;3.86e-07;9!UBERON:0002308;3.86e-07;9 | |||
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| ||
|short_description=p4@MFSD6 | |||
}} | }} |
Latest revision as of 03:16, 19 September 2015
Short description: | p4@MFSD6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MFSD6_5end |
Coexpression cluster: | NA |
Association with transcript: | -212bp_to_ENST00000392328, ENST00000417958, ENST00000432036, NM_017694, uc002urz.2_5end |
EntrezGene: | MFSD6 |
HGNC: | 24711 |
UniProt: | Q6ZSS7C9JAZ7C9J134 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 4.00e-13 | 52 |
mature alpha-beta T cell | 4.65e-13 | 18 |
alpha-beta T cell | 4.65e-13 | 18 |
immature T cell | 4.65e-13 | 18 |
mature T cell | 4.65e-13 | 18 |
immature alpha-beta T cell | 4.65e-13 | 18 |
lymphocyte | 1.19e-12 | 53 |
common lymphoid progenitor | 1.19e-12 | 53 |
T cell | 8.66e-10 | 25 |
pro-T cell | 8.66e-10 | 25 |
CD8-positive, alpha-beta T cell | 2.03e-09 | 11 |