FFCP PHASE1:Hg19::chr2:175869890..175869933,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:175869890..175869933,- to FFCP PHASE1:Hg19::chr2:175869890..175869933,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1123 | |EntrezGene=1123 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1943 | |HGNC=1943 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=13bp_to_ENST00000469597_5end | |||
|cluster_id=chr2:175869890..175869933,- | |||
|coexpression_cluster_id=C4147 | |||
|description=CAGE_peak_6_at_CHN1_5end | |||
|id=chr2:175869890..175869933,- | |||
|ontology_enrichment_celltype=CL:0002319!8.93e-08!25 | |||
|ontology_enrichment_celltype_v019=CL:0002319;1.33e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.25e-08,25 | |||
|ontology_enrichment_development_v019=UBERON:0008947;8.48e-10;29!UBERON:0006601;2.60e-08;82 | |||
|ontology_enrichment_disease=DOID:0050687!5.01e-11!143;DOID:305!9.66e-10!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,9.23e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0005743!1.00e-30!86;UBERON:0000073!2.86e-30!94;UBERON:0001016!2.86e-30!94;UBERON:0001017!4.45e-29!82;UBERON:0003080!2.43e-24!42;UBERON:0002780!9.01e-24!41;UBERON:0001890!9.01e-24!41;UBERON:0006240!9.01e-24!41;UBERON:0002346!9.29e-24!90;UBERON:0000955!9.48e-24!69;UBERON:0006238!9.48e-24!69;UBERON:0003075!1.89e-23!86;UBERON:0007284!1.89e-23!86;UBERON:0001049!2.20e-23!57;UBERON:0005068!2.20e-23!57;UBERON:0006241!2.20e-23!57;UBERON:0007135!2.20e-23!57;UBERON:0007023!3.47e-23!115;UBERON:0001893!9.85e-23!34;UBERON:0001869!1.37e-22!32;UBERON:0002020!2.29e-22!34;UBERON:0003528!2.29e-22!34;UBERON:0003056!4.71e-22!61;UBERON:0002791!5.59e-22!33;UBERON:0002616!1.65e-20!59;UBERON:0000477!3.18e-19!286;UBERON:0000956!2.55e-18!25;UBERON:0000203!2.55e-18!25;UBERON:0000924!7.41e-18!173;UBERON:0006601!7.41e-18!173;UBERON:0000033!1.63e-17!123;UBERON:0004121!2.26e-17!169;UBERON:0000153!5.31e-17!129;UBERON:0007811!5.31e-17!129;UBERON:0002619!1.23e-16!22;UBERON:0004111!2.21e-16!241;UBERON:0001950!1.86e-15!20;UBERON:0000025!2.13e-14!194;UBERON:0000119!1.58e-12!312;UBERON:0000064!1.61e-12!219;UBERON:0000483!2.28e-12!309;UBERON:0000481!1.19e-11!347;UBERON:0000468!1.63e-11!659;UBERON:0000475!6.77e-11!365;UBERON:0000480!2.22e-09!626;UBERON:0000467!3.44e-09!625;UBERON:0000922!5.51e-09!612;UBERON:0002050!3.27e-07!605;UBERON:0005423!3.27e-07!605;UBERON:0000923!4.43e-07!604;UBERON:0005291!4.43e-07!604;UBERON:0006598!4.43e-07!604;UBERON:0002532!4.43e-07!604 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;5.79e-30;32!UBERON:0001893;3.13e-28;34!UBERON:0002791;5.99e-28;32!UBERON:0003528;1.37e-27;34!UBERON:0002020;1.37e-27;34!UBERON:0000956;1.12e-26;25!UBERON:0000203;1.12e-26;25!UBERON:0002619;3.86e-24;22!UBERON:0002780;4.22e-24;41!UBERON:0001890;4.22e-24;41!UBERON:0001950;2.15e-22;20!UBERON:0000073;7.68e-18;53!UBERON:0002616;7.68e-18;53!UBERON:0000955;5.02e-15;68!UBERON:0001017;7.92e-14;75!UBERON:0001016;6.28e-13;83!UBERON:0001871;4.48e-08;6!UBERON:0000200;1.09e-07;6!UBERON:0002420;2.15e-07;9!UBERON:0007245;2.15e-07;9!UBERON:0010009;2.15e-07;9!UBERON:0010011;2.15e-07;9!UBERON:0000454;2.15e-07;9!UBERON:0007023;3.96e-07;114!UBERON:0001872;8.51e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.01e-37,81;UBERON:0001016,8.40e-36,89;UBERON:0002780,5.82e-33,41;UBERON:0001890,5.82e-33,41;UBERON:0003080,5.82e-33,41;UBERON:0006240,5.82e-33,41;UBERON:0001869,7.11e-33,32;UBERON:0001893,1.10e-31,34;UBERON:0000955,1.64e-31,68;UBERON:0006238,1.64e-31,68;UBERON:0003528,3.74e-31,34;UBERON:0002020,3.74e-31,34;UBERON:0000073,2.28e-30,53;UBERON:0002616,2.28e-30,53;UBERON:0002791,2.30e-30,32;UBERON:0001049,2.41e-29,56;UBERON:0005068,2.41e-29,56;UBERON:0006241,2.41e-29,56;UBERON:0007135,2.41e-29,56;UBERON:0003056,6.02e-28,61;UBERON:0000956,1.67e-26,25;UBERON:0000203,1.67e-26,25;UBERON:0002346,1.22e-24,86;UBERON:0003075,1.28e-24,82;UBERON:0007284,1.28e-24,82;UBERON:0002619,5.45e-24,22;UBERON:0007023,1.18e-22,114;UBERON:0001950,3.11e-22,20;UBERON:0011216,3.46e-21,223;UBERON:0004121,6.51e-19,171;UBERON:0000924,6.51e-19,171;UBERON:0006601,6.51e-19,171;UBERON:0010371,3.14e-18,104;UBERON:0000025,2.56e-15,192;UBERON:0010314,2.84e-15,132;UBERON:0004111,5.00e-12,240;UBERON:0000483,2.24e-09,306;UBERON:0000119,5.01e-09,309;UBERON:0001871,5.29e-08,6;UBERON:0000922,1.11e-07,592;UBERON:0000200,1.19e-07,6;UBERON:0002420,1.59e-07,9;UBERON:0007245,1.59e-07,9;UBERON:0010009,1.59e-07,9;UBERON:0010011,1.59e-07,9;UBERON:0000454,1.59e-07,9;UBERON:0001872,9.43e-07,5 | |||
|phase1_expression=0.726713517082227,0.214100523890983,0.140954404095971,0,0.446961094427288,0,0,0,0,1.22866968250754,2.79120467188971,0,0,0,0,0,0.602694528023977,1.46062018077475,0.975865597581014,2.46242116153576,0.816002764977012,0.626909442956176,4.57977579409691,3.42186062682211,4.01736446703369,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0.393010762749165,0.205601498999509,0,0,0,0,0,0,0.221533894583621,0,0.128091319725675,0,0,0,0,0.14828656316206,0,0,0.113309342697566,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0.289693037921647,0,0,1.98523116044542,0.886917589850256,2.0202000709419,3.1434978119451,0,0,0,0,0,0,0,0,0.596287222100115,0,0,1.13061588384802,0.838998872419812,0.825354125820202,1.04497483268405,1.55050055501597,2.13459757612026,4.01664735317604,0.402829317109147,3.04108842287405,1.22031028774085,0.735326160691737,0,1.60739510911344,0.898117490504679,1.46394924628319,1.53316637465883,0,1.46561395144326,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0.163461903113459,0.454072282934794,0,0.234321431833797,0,0,0.149448680551801,0.822041490506354,0.647491777472526,0.842704840213491,0,0.61417158655884,0.413303124703062,1.18800285728205,0.247266929278557,0.910161361938026,0,0.168336113954066,0.375355559615893,0.831192346452549,0,0.30648779579902,0.45071417671979,0,0.179389635688862,0.213557388818567,0,0.600182192168805,0.103052529238439,0.515281080091258,0,0.168776332241266,0.487185025805993,0,0,0,0.355009592516614,0,0.508681776931463,0.193260853163297,0.272746120590835,0,1.95157929807353,6.22889911110981,4.06678800043314,2.38420426535352,2.52320850875628,5.47466038613745,0,0,0,0,0,2.12952240071719,3.37169380156203,2.89213235860178,1.21323370005633,2.39667388501647,1.89816495288877,1.75280700608214,1.37355025587742,2.69323009862473,2.21446636387394,1.40241773803446,0,0,0,0,0,1.32438929824395,0,0.514703430895577,0,0,0,0,0,0,1.44331342025273,1.507095264676,0.70445216541493,0.577465791044295,0.925971025153221,0.951270761172991,0.790204397959275,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253991577168676,0,0,0,0,0,0,0.224262168690721,0.43596006883328,0.2933531432838,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399891964728228,0,0,0,0,1.14861935834114,0,0.434343920002738,0.205476322550383,1.61154866915906,0,0,0,0,2.03275699377971,2.60279707715243,1.54657762555539,1.67516265334349,1.27587750330633,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0.184369168541703,0.173767228936166,0,0,0,0,0.213455115606889,0,0,0,0,0,0,0,0,0.321707842287215,0,0.154209693802656,0,0.0821271560138091,0.519254429183621,0,0,0.200506470303285,0,0.229628896329213,0.182091168006717,0.393373244878272,1.80479845162965,1.46329140498388,1.56869953835371,2.92278449306521,2.11103257785751,2.27466768141793,1.36074964221213,0.863663664408557,0,0.541892875087706,0,0.254876273045038,0,1.34324852833307,0,0,1.02580050046556,1.64007322849853,3.57916234130733,0.412164046590889,0.824125183365091,1.32015199872941,0,0,0,1.06337790121334,0.154048617114644,0.15350367472613,0.551346289938122,0.107420244868274,0,0.255679882248303,1.51354460599453,0.165284915360978,0.192190067365106,0.382838137483752,0.30347334256665,0,0,0,0,0,0,0.18532421910392,0,1.86079184679834,0,0,0,0,0,0,0.359744915166629,0.274537029736055,0.589062011728432,0,0,0,0,0.487426979262569,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0.202910376962704,0.6196469961995,0,0.143411352204052,0.196498082026242,0.35667105148125,0,0,0,0,0.349934720244983,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0,1.92495971052672,0,0,0.432807638929335,0,2.71024663638998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90460633053462,1.45632626099416,6.35227290381627,1.70481688083848,0,0,0,10.9356241254293,5.48610724001,1.11308705022906,0.16480387422676,2.32237948940793,5.37969568277888,1.38141957765574,3.77899121781414,0.306806047506464,0,0,0.629078458031288,0.179021174675609,0,0.789147245095469,0,0,11.6319929531426,7.2359116566244,1.99613798001194,3.1251331330228,0,3.62499787717397,0,0,4.25497827182285,4.48166385213904,1.45802306691627,2.77799991893268,6.20018970069687,4.10027891326387,0,0,0,7.45910350323507,1.41620002574687,0,1.07730361905316,0.797594390929008,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,6.32994193584081,0,0,4.9769387140681,0,0.619202951523374,0.611030144933625,0.296521128680622,0,0.208843899010911,1.07841812769083,0.802577647298789,5.62234669740814,0,0.19566461893209,0.242780379534093,1.18375320854817,1.20990716048664,7.95789180239274,2.40109002588254,8.86908174545506,2.48851659353393,0.664653872707185,0.330991955875499,0,0,0,1.24807205711825,0,0.0979923974143777,0.0870592065804026,2.27144668714639,3.61170668190395,2.12863928835987,2.99666200053361,1.72442459811739,1.06687918137261,15.88610280447,2.71176888936639,0.137041924646751,1.58971689362392,9.87648416911708,0.391102765469606,2.24444696704294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| ||
|short_description=p6@CHN1 | |||
}} | }} |
Latest revision as of 08:11, 18 September 2015
Short description: | p6@CHN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CHN1_5end |
Coexpression cluster: | C4147_extraskeletal_occipital_small_brain_medial_temporal_insula |
Association with transcript: | 13bp_to_ENST00000469597_5end |
EntrezGene: | CHN1 |
HGNC: | 1943 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.25e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 9.23e-07 | 143 |