FFCP PHASE1:Hg19::chr2:165477952..165477968,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:165477952..165477968,- to FFCP PHASE1:Hg19::chr2:165477952..165477968,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2888 | |EntrezGene=2888 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4565 | |HGNC=4565 | ||
|TSSclassifier=strong | |||
|UniProt=C9JD37 | |UniProt=C9JD37 | ||
|association_with_transcript=19bp_to_ENST00000446413_5end | |||
|cluster_id=chr2:165477952..165477968,- | |||
|description=CAGE_peak_3_at_GRB14_5end | |||
|id=chr2:165477952..165477968,- | |||
|ontology_enrichment_celltype=CL:0000066!2.78e-09!254;CL:0002321!1.60e-08!248;CL:0000359!2.84e-08!32;CL:0000220!5.02e-08!246;CL:0000071!3.79e-07!18;CL:0002546!3.79e-07!18;CL:1000497!4.61e-07!18;CL:0002518!4.61e-07!18;CL:1000507!9.40e-07!12;CL:1000494!9.40e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:1000507;8.64e-15;10!CL:1000494;8.64e-15;10!CL:1000497;2.90e-13;17!CL:0002518;2.90e-13;17!CL:0000359;7.58e-12;32!CL:1000449;3.82e-11;15!CL:0000071;7.14e-08;18!CL:1000413;2.61e-07;9!CL:0000192;5.38e-07;43!CL:0002681;7.21e-07;12!CL:0002584;7.21e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,6.27e-15,10;CL:1000494,6.27e-15,10;CL:1000497,2.62e-13,17;CL:0002518,2.62e-13,17;CL:0000359,1.10e-12,32;CL:1000449,3.12e-11,15;CL:0002321,1.21e-08,250;CL:0000192,3.33e-08,43;CL:0000514,3.33e-08,43;CL:0000222,3.45e-08,121;CL:0000071,6.21e-08,18;CL:0002546,6.21e-08,18;CL:1000413,2.36e-07,9;CL:0002681,6.06e-07,12;CL:0002584,6.06e-07,12 | |||
|ontology_enrichment_development_v019=CL:0002546;7.14e-08;18!CL:0000514;5.38e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!2.36e-19!194;UBERON:0003914!2.33e-18!118;UBERON:0004111!1.68e-15!241;UBERON:0000119!6.39e-15!312;UBERON:0000483!8.31e-15!309;UBERON:0004573!4.74e-14!33;UBERON:0004571!4.74e-14!33;UBERON:0001637!9.21e-14!42;UBERON:0003509!9.21e-14!42;UBERON:0004572!9.21e-14!42;UBERON:0001981!2.28e-13!60;UBERON:0007500!2.28e-13!60;UBERON:0004537!2.28e-13!60;UBERON:0006965!2.28e-13!60;UBERON:0000477!4.53e-12!286;UBERON:0000055!3.80e-11!69;UBERON:0009569!1.22e-10!113;UBERON:0002049!2.00e-10!79;UBERON:0007798!2.00e-10!79;UBERON:0004872!2.69e-10!84;UBERON:0000490!1.82e-09!138;UBERON:0000475!2.11e-09!365;UBERON:0000468!2.36e-09!659;UBERON:0002100!4.71e-09!216;UBERON:0000947!1.05e-08!21;UBERON:0010191!1.05e-08!21;UBERON:0003103!1.78e-08!69;UBERON:0000481!3.59e-08!347;UBERON:0002417!1.15e-07!61;UBERON:0000916!1.15e-07!61;UBERON:0003886!1.29e-07!63;UBERON:0000466!2.16e-07!126;UBERON:0002113!3.39e-07!27;UBERON:0003918!3.39e-07!27;UBERON:0005095!3.39e-07!27;UBERON:0007687!3.39e-07!27;UBERON:0001986!3.79e-07!18;UBERON:0004638!3.79e-07!18;UBERON:0004852!3.79e-07!18;UBERON:0001009!4.66e-07!113;UBERON:0002553!5.91e-07!70;UBERON:0009773!9.40e-07!12;UBERON:0001231!9.40e-07!12;UBERON:0004810!9.40e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.33e-22;33!UBERON:0004571;2.33e-22;33!UBERON:0001637;1.08e-17;42!UBERON:0003509;1.08e-17;42!UBERON:0004572;1.08e-17;42!UBERON:0004211;8.64e-15;10!UBERON:0009773;8.64e-15;10!UBERON:0001231;8.64e-15;10!UBERON:0004810;8.64e-15;10!UBERON:0007500;1.13e-12;56!UBERON:0001981;1.13e-12;56!UBERON:0004537;1.13e-12;56!UBERON:0003914;1.31e-12;74!UBERON:0000947;2.15e-12;21!UBERON:0010191;2.15e-12;21!UBERON:0002113;7.75e-12;24!UBERON:0011143;7.75e-12;24!UBERON:0006555;3.82e-11;15!UBERON:0004819;3.82e-11;15!UBERON:0001285;3.82e-11;15!UBERON:0007684;3.82e-11;15!UBERON:0000489;3.96e-09;29!UBERON:0000055;8.43e-09;65!UBERON:0006554;1.06e-08;30!UBERON:0001008;1.06e-08;30!UBERON:0000025;4.59e-08;93!UBERON:0004638;7.14e-08;18!UBERON:0001986;7.14e-08;18!UBERON:0004852;7.14e-08;18!UBERON:0005172;2.44e-07;52!UBERON:0005173;2.44e-07;52!UBERON:0003915;2.61e-07;9!UBERON:0004700;2.61e-07;9!UBERON:0001917;2.61e-07;9!UBERON:0001225;7.21e-07;12!UBERON:0008987;7.21e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,7.66e-30,117;UBERON:0004573,1.28e-24,33;UBERON:0004571,1.28e-24,33;UBERON:0001637,5.47e-23,42;UBERON:0003509,5.47e-23,42;UBERON:0004572,5.47e-23,42;UBERON:0007500,2.45e-22,59;UBERON:0001981,2.45e-22,59;UBERON:0004537,2.45e-22,59;UBERON:0006965,2.45e-22,59;UBERON:0000055,3.10e-19,68;UBERON:0000025,1.54e-18,192;UBERON:0004872,1.15e-17,83;UBERON:0002049,1.77e-15,78;UBERON:0007798,1.77e-15,78;UBERON:0004810,6.27e-15,10;UBERON:0004111,2.44e-13,240;UBERON:0001009,6.28e-13,112;UBERON:0000947,2.47e-12,21;UBERON:0010191,2.47e-12,21;UBERON:0004535,1.07e-11,109;UBERON:0003104,1.66e-11,160;UBERON:0009142,1.66e-11,160;UBERON:0004211,3.12e-11,15;UBERON:0009773,3.12e-11,15;UBERON:0001231,3.12e-11,15;UBERON:0001285,3.12e-11,15;UBERON:0007684,3.12e-11,15;UBERON:0004208,3.12e-11,15;UBERON:0002113,1.25e-10,26;UBERON:0003918,1.25e-10,26;UBERON:0011143,1.25e-10,26;UBERON:0005095,1.25e-10,26;UBERON:0007687,1.25e-10,26;UBERON:0003103,1.43e-10,68;UBERON:0009569,1.89e-10,112;UBERON:0002100,1.99e-10,199;UBERON:0006555,2.31e-10,16;UBERON:0004819,2.31e-10,16;UBERON:0002417,3.03e-10,60;UBERON:0000916,3.03e-10,60;UBERON:0005172,6.26e-10,54;UBERON:0005173,6.26e-10,54;UBERON:0000483,4.41e-09,306;UBERON:0000119,7.86e-09,309;UBERON:0000489,2.65e-08,31;UBERON:0000490,4.38e-08,148;UBERON:0004638,6.21e-08,18;UBERON:0001986,6.21e-08,18;UBERON:0004852,6.21e-08,18;UBERON:0003915,2.36e-07,9;UBERON:0004700,2.36e-07,9;UBERON:0001917,2.36e-07,9;UBERON:0001225,6.06e-07,12;UBERON:0008987,6.06e-07,12 | |||
|phase1_expression=0.181678379270557,1.2846031433459,0.704772020479856,2.00146596706261,0.893922188854576,0.872338524100369,0,0,0,0.737201809504527,0.697801167972428,0,0,0.123766352960047,0,0.672325146451775,0,0.730310090387373,0.487932798790507,0.123121058076788,0,0,1.14494394852423,0.547497700291537,1.25542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.722878304769133,1.50401373190767,1.30361867064741,2.3858578411533,0.973269740605272,0.0945348171640679,0,0.087834785693126,0.523916301990851,0.364295288292542,0.741568885568859,0,0,0,0,0,0,1.39133685156694,0.860234595106124,1.38856200643038,2.26123176769604,1.67799774483962,0.275118041940067,1.67195973229448,0.258416759169329,0,0,0.402829317109147,1.52054421143703,0,1.10298924103761,1.62028389576352,2.05389375053383,0.898117490504679,0.675668882899933,0,1.89853131913626,1.28241220751285,0,0,0,0,1.2663051166458,2.51577443545116,2.58152958673932,0,0,0,1.2333377420858,0,0,0,0.151357427644931,0,0,0,0.570471821544449,0,0,0,0,0.408308342509787,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0.226864366320042,0.179389635688862,0,0,0,0,0.257640540045629,0.37223371266318,2.02531598689519,0.68205903612839,0,0,0,0.710019185033229,0.906768884048762,0.339121184620975,0,0,0,1.58565817968474,0.927708378250397,0.813357600086629,0.310983165046111,1.51392510525377,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0.474541238222193,0,0,0,0,0,0,0,5.07020139287323,6.87979051674338,2.95394953340702,0,4.05861847192275,0.171567810298526,0.548751427043128,1.1240175325762,0.100528972411631,0.277765335475589,0,0,0,0.231860809950154,0.234817388471643,1.01056513432752,0,0.190254152234598,1.58040879591855,0.858486162094873,0,0,0,0,0.16798212819886,0.283550194484773,0.626909658919938,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0.224262168690721,0,0.4400297149257,0,0,0,0,0,0,0,0.266422179016099,0.142977993658148,0,0,0,0,0,3.31583314765545,2.61460037580088,1.09970290300263,0,0,0,4.31324739884849,2.29723871668228,0,2.60606352001643,0.205476322550383,0.358121926479791,0,0,0,0,0.508189248444927,2.60279707715243,0,0.335032530668698,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0.902838299183157,0,0,0,0.184369168541703,0,0.195801157462741,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0,0.384417447767103,1.53512174720011,0.321707842287215,1.48418066444991,0,0.355123450626254,0.821271560138091,2.59627214591811,0.813472649219715,2.90062679019893,0.802025881213139,0.552485933615378,0,0,0,4.06079651616671,5.85316561993552,7.0591479225917,8.76835347919564,11.6106791782163,0,0,2.37507507712353,0,19.7790899407013,12.0405545725165,1.78413391131527,0.831076008928724,7.38786690583188,0,0,0.256450125116389,0,0,2.47298427954533,0,0,0,0.650060246036521,0,0.096670718292122,0,0,0,0.322260734604821,0,0.170453254832202,0,0.330569830721956,0,1.65896526242959,0.30347334256665,2.32422774648643,1.5740617341532,4.8792608911242,4.62050370264133,7.45228442443831,6.95946393660058,6.30102344953328,12.3087402598112,0.744316738719335,0.949138274156178,0,0,0,4.13664222303718,1.56989728039846,0.179872457583315,0.274537029736055,0,8.49166422607927,0,4.21258456238981,0.48763373908959,18.034798232715,0,0,0.141405431953713,2.26016233240486,18.1950563370221,3.3171948762061,2.63070531152258,0.578775534266688,0,0.405820753925408,0,0,0,0,0,0,0.844430541190656,0,0,0,0.192444225451024,0,0,2.7301702225266,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.534120355637366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0.23874448473769,0.296964680832639,0.307160702099232,0.994147647766298,0.140669416410513,0.333926115068718,0,2.32237948940793,0,0,0.755798243562828,0.20453736500431,0,0.622079175323615,0.269605053441981,0.716084698702437,0,0.0986434056369336,0,2.22273980289274,0,0,3.99227596002388,1.04171104434093,0,1.44999915086959,0.341380344856499,0,0.236387681767936,0.689486746482929,0.583209226766509,0,0,0,0,0,0.295547618953547,0,0,1.39423744278603,0,0,0.46112780877612,0,0,0,0,0,0,0,0,0,0,0,0,0,3.37596903244843,2.77495773870551,3.1097675715467,0.649165919226273,0,0.442287822516696,0,0,0,0,0,4.01288823649394,0,0,1.17398771359254,0,0,0,1.53036380815245,0,0.450970258243478,0.311064574191741,0,0,0,0,3.41531455235751,0,0.347119476670262,0,0.34823682632161,0.52418000472609,0,0.0967563312890851,0.0730893170861856,0.0821154570532092,0.0969890164884194,0,0,0.685209623233754,0.19871461170299,0.379864775735272,0.586654148204409,0.801588202515337,0,0,3.02589876023623,0,0.514784993585894,0,0,0.471388069233591,0,0,0,0,0,0.136905378891993,0,0,0,2.51354161145029,1.83328339209347,0,0.798716001995964,2.14613024068285,5.35611497860494,0.604651252380536,0,0,1.10296455230113,1.31865373409866,1.68508859635462,0.295282444544246,0,0,1.49823746722733,1.44677833618517,1.37539436597234,0.415440338029185,0,0,0.303747783290123,0,2.12775409707835,4.6684583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| ||
|short_description=p3@GRB14 | |||
}} | }} |
Latest revision as of 22:57, 17 September 2015
Short description: | p3@GRB14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GRB14_5end |
Coexpression cluster: | NA |
Association with transcript: | 19bp_to_ENST00000446413_5end |
EntrezGene: | GRB14 |
HGNC: | 4565 |
UniProt: | C9JD37 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 6.27e-15 | 10 |
nephron tubule epithelial cell | 6.27e-15 | 10 |
kidney cell | 2.62e-13 | 17 |
kidney epithelial cell | 2.62e-13 | 17 |
vascular associated smooth muscle cell | 1.10e-12 | 32 |
epithelial cell of nephron | 3.12e-11 | 15 |
embryonic cell | 1.21e-08 | 250 |
smooth muscle cell | 3.33e-08 | 43 |
smooth muscle myoblast | 3.33e-08 | 43 |
mesodermal cell | 3.45e-08 | 121 |
blood vessel endothelial cell | 6.21e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.21e-08 | 18 |
endothelial cell of artery | 2.36e-07 | 9 |
kidney cortical cell | 6.06e-07 | 12 |
renal cortical epithelial cell | 6.06e-07 | 12 |