FFCP PHASE1:Hg19::chr2:110371723..110371750,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:110371723..110371750,- to FFCP PHASE1:Hg19::chr2:110371723..110371750,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=151011 | |EntrezGene=151011 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14349 | |HGNC=14349 | ||
|TSSclassifier=strong | |||
|UniProt=B5ME97 | |UniProt=B5ME97 | ||
|association_with_transcript=-3bp_to_ENST00000356688_5end | |||
|cluster_id=chr2:110371723..110371750,- | |||
|description=CAGE_peak_2_at_SEPT10_5end | |||
|id=chr2:110371723..110371750,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003104;8.76e-07;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!1.97e-28!659;UBERON:0000922!3.01e-24!612;UBERON:0000467!1.25e-22!625;UBERON:0000480!3.45e-22!626;UBERON:0002050!6.22e-21!605;UBERON:0005423!6.22e-21!605;UBERON:0000923!1.24e-20!604;UBERON:0005291!1.24e-20!604;UBERON:0006598!1.24e-20!604;UBERON:0002532!1.24e-20!604;UBERON:0000062!2.17e-20!511;UBERON:0004111!9.70e-16!241;UBERON:0000481!4.12e-14!347;UBERON:0000477!8.68e-14!286;UBERON:0000475!2.14e-13!365;UBERON:0007023!1.87e-12!115;UBERON:0000025!7.16e-12!194;UBERON:0000924!1.91e-11!173;UBERON:0006601!1.91e-11!173;UBERON:0000483!8.19e-11!309;UBERON:0000119!8.38e-11!312;UBERON:0004121!8.49e-11!169;UBERON:0005743!3.43e-09!86;UBERON:0004119!5.61e-09!169;UBERON:0000925!5.61e-09!169;UBERON:0006595!5.61e-09!169;UBERON:0001017!7.68e-09!82;UBERON:0000466!1.05e-08!126;UBERON:0000033!2.47e-08!123;UBERON:0000073!2.54e-08!94;UBERON:0001016!2.54e-08!94;UBERON:0001007!2.89e-08!155;UBERON:0001555!2.89e-08!155;UBERON:0007026!2.89e-08!155;UBERON:0005177!1.10e-07!107;UBERON:0000153!1.32e-07!129;UBERON:0007811!1.32e-07!129;UBERON:0000064!2.40e-07!219;UBERON:0002346!2.73e-07!90;UBERON:0003104!7.28e-07!238;UBERON:0009142!7.28e-07!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;3.25e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000922,3.34e-23,592;UBERON:0005423,4.35e-19,581;UBERON:0002050,4.19e-17,564;UBERON:0000923,4.48e-17,560;UBERON:0010316,4.48e-17,560;UBERON:0005291,4.48e-17,560;UBERON:0006598,4.48e-17,560;UBERON:0010317,4.48e-17,560;UBERON:0002532,4.48e-17,560;UBERON:0004111,1.54e-15,240;UBERON:0011216,4.30e-14,223;UBERON:0007023,2.64e-12,114;UBERON:0000025,1.94e-11,192;UBERON:0004121,7.11e-11,171;UBERON:0000924,7.11e-11,171;UBERON:0006601,7.11e-11,171;UBERON:0000483,2.09e-10,306;UBERON:0000119,2.13e-10,309;UBERON:0004119,5.20e-09,160;UBERON:0000925,5.20e-09,160;UBERON:0006595,5.20e-09,160;UBERON:0001017,1.42e-08,81;UBERON:0001007,3.62e-08,145;UBERON:0001555,3.62e-08,145;UBERON:0007026,3.62e-08,145;UBERON:0001016,1.01e-07,89;UBERON:0002346,3.75e-07,86;UBERON:0010314,5.62e-07,132;UBERON:0005177,5.98e-07,101 | |||
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| ||
|short_description=p2@SEPT10 | |||
}} | }} |
Latest revision as of 07:24, 16 September 2015
Short description: | p2@SEPT10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SEPT10_5end |
Coexpression cluster: | NA |
Association with transcript: | -3bp_to_ENST00000356688_5end |
EntrezGene: | SEPT10 |
HGNC: | 14349 |
UniProt: | B5ME97 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryo | 3.34e-23 | 592 |
developing anatomical structure | 4.35e-19 | 581 |
embryonic structure | 4.19e-17 | 564 |
germ layer | 4.48e-17 | 560 |
germ layer / neural crest | 4.48e-17 | 560 |
embryonic tissue | 4.48e-17 | 560 |
presumptive structure | 4.48e-17 | 560 |
germ layer / neural crest derived structure | 4.48e-17 | 560 |
epiblast (generic) | 4.48e-17 | 560 |
anatomical conduit | 1.54e-15 | 240 |
organ system subdivision | 4.30e-14 | 223 |
adult organism | 2.64e-12 | 114 |
tube | 1.94e-11 | 192 |
ectoderm-derived structure | 7.11e-11 | 171 |
ectoderm | 7.11e-11 | 171 |
presumptive ectoderm | 7.11e-11 | 171 |
epithelium | 2.09e-10 | 306 |
cell layer | 2.13e-10 | 309 |
endoderm-derived structure | 5.20e-09 | 160 |
endoderm | 5.20e-09 | 160 |
presumptive endoderm | 5.20e-09 | 160 |
central nervous system | 1.42e-08 | 81 |
digestive system | 3.62e-08 | 145 |
digestive tract | 3.62e-08 | 145 |
primitive gut | 3.62e-08 | 145 |
nervous system | 1.01e-07 | 89 |
neurectoderm | 3.75e-07 | 86 |
structure with developmental contribution from neural crest | 5.62e-07 | 132 |
trunk region element | 5.98e-07 | 101 |