FFCP PHASE1:Hg19::chr2:106013400..106013438,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:106013400..106013438,- to FFCP PHASE1:Hg19::chr2:106013400..106013438,-: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2274 | |EntrezGene=2274 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3703 | |HGNC=3703 | ||
|TSSclassifier=strong | |||
|UniProt=Q14192 | |UniProt=Q14192 | ||
|association_with_transcript=0bp_to_ENST00000409807,uc002tcu.2_5end | |||
|cluster_id=chr2:106013400..106013438,- | |||
|coexpression_cluster_id=C4115 | |||
|description=CAGE_peak_5_at_FHL2_5end | |||
|id=chr2:106013400..106013438,- | |||
|ontology_enrichment_celltype=CL:0000222!2.42e-21!119;CL:0000055!2.61e-21!180;CL:0000192!9.15e-15!42;CL:0000514!9.15e-15!42;CL:0000680!5.47e-14!57;CL:0000056!5.47e-14!57;CL:0000355!5.47e-14!57;CL:0000183!7.97e-14!59;CL:0000548!1.17e-13!679;CL:0000004!1.17e-13!679;CL:0000255!1.17e-13!679;CL:0000057!1.67e-13!75;CL:0000187!3.97e-13!54;CL:0000012!5.18e-13!682;CL:0000359!5.86e-13!32;CL:0000220!7.07e-13!246;CL:0002321!2.33e-12!248;CL:0000393!8.98e-10!60;CL:0000211!8.98e-10!60;CL:0000144!1.80e-08!625;CL:0000076!9.44e-08!62;CL:0000213!1.18e-07!57;CL:0000215!1.18e-07!57;CL:0000003!2.89e-07!722 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.33e-14;32!CL:0000192;1.41e-11;43!CL:0000134;6.38e-08;55!CL:0000071;9.19e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.26e-19,121;CL:0000192,3.95e-16,43;CL:0000514,3.95e-16,43;CL:0000359,3.73e-15,32;CL:0000057,2.87e-13,76;CL:0000680,5.59e-12,58;CL:0000056,5.59e-12,58;CL:0000355,5.59e-12,58;CL:0000187,1.64e-11,55;CL:0002321,4.06e-09,250;CL:0000393,5.25e-09,61;CL:0000211,5.25e-09,61;CL:0000213,2.88e-08,58;CL:0000215,2.88e-08,58;CL:0000076,3.13e-07,63 | |||
|ontology_enrichment_development_v019=CL:0000514;1.41e-11;43!CL:0002546;9.19e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!1.22e-18!79;UBERON:0007798!1.22e-18!79;UBERON:0004872!9.69e-16!84;UBERON:0001637!2.78e-15!42;UBERON:0003509!2.78e-15!42;UBERON:0004572!2.78e-15!42;UBERON:0001981!4.02e-15!60;UBERON:0007500!4.02e-15!60;UBERON:0004537!4.02e-15!60;UBERON:0006965!4.02e-15!60;UBERON:0000055!8.55e-15!69;UBERON:0000490!1.40e-14!138;UBERON:0003914!1.56e-14!118;UBERON:0004535!1.37e-13!110;UBERON:0001009!3.39e-13!113;UBERON:0004573!1.76e-12!33;UBERON:0004571!1.76e-12!33;UBERON:0001134!6.06e-12!61;UBERON:0002036!6.06e-12!61;UBERON:0003082!6.06e-12!61;UBERON:0002385!1.35e-11!63;UBERON:0001015!1.35e-11!63;UBERON:0000383!1.35e-11!63;UBERON:0005256!4.02e-11!143;UBERON:0000914!8.10e-11!83;UBERON:0002329!8.10e-11!83;UBERON:0003077!8.10e-11!83;UBERON:0003059!8.10e-11!83;UBERON:0007282!8.10e-11!83;UBERON:0009618!8.10e-11!83;UBERON:0007285!8.10e-11!83;UBERON:0002100!9.43e-10!216;UBERON:0003104!1.29e-09!238;UBERON:0009142!1.29e-09!238;UBERON:0000477!1.48e-09!286;UBERON:0004290!1.60e-09!70;UBERON:0000486!3.94e-09!82;UBERON:0000481!9.41e-09!347;UBERON:0000947!1.57e-08!21;UBERON:0010191!1.57e-08!21;UBERON:0000926!6.85e-07!448;UBERON:0004120!6.85e-07!448;UBERON:0006603!6.85e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.44e-13;33!UBERON:0004571;2.44e-13;33!UBERON:0001637;3.23e-13;42!UBERON:0003509;3.23e-13;42!UBERON:0004572;3.23e-13;42!UBERON:0007500;1.45e-11;56!UBERON:0001981;1.45e-11;56!UBERON:0004537;1.45e-11;56!UBERON:0000947;4.70e-10;21!UBERON:0010191;4.70e-10;21!UBERON:0003914;4.56e-09;74!UBERON:0000055;1.35e-08;65!UBERON:0002049;3.70e-08;75!UBERON:0007798;3.70e-08;75!UBERON:0006914;1.46e-07;25!UBERON:0000487;2.33e-07;22!UBERON:0001135;6.62e-07;15!UBERON:0004638;9.19e-07;18!UBERON:0001986;9.19e-07;18!UBERON:0004852;9.19e-07;18!UBERON:0001737;9.89e-07;9!UBERON:0001557;9.89e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,2.11e-19,78;UBERON:0007798,2.11e-19,78;UBERON:0001637,3.91e-18,42;UBERON:0003509,3.91e-18,42;UBERON:0004572,3.91e-18,42;UBERON:0004872,3.69e-17,83;UBERON:0007500,3.77e-17,59;UBERON:0001981,3.77e-17,59;UBERON:0004537,3.77e-17,59;UBERON:0006965,3.77e-17,59;UBERON:0000055,1.43e-16,68;UBERON:0003914,1.77e-15,117;UBERON:0004573,8.61e-15,33;UBERON:0004571,8.61e-15,33;UBERON:0004535,1.62e-14,109;UBERON:0001009,1.77e-13,112;UBERON:0001134,3.06e-10,62;UBERON:0002036,3.06e-10,62;UBERON:0003082,3.06e-10,62;UBERON:0000947,4.40e-10,21;UBERON:0010191,4.40e-10,21;UBERON:0002385,4.56e-10,64;UBERON:0001015,4.56e-10,64;UBERON:0000383,4.56e-10,64;UBERON:0000490,4.81e-10,148;UBERON:0002329,4.27e-08,71;UBERON:0003059,4.27e-08,71;UBERON:0007282,4.27e-08,71;UBERON:0004290,4.27e-08,71;UBERON:0009618,4.27e-08,71;UBERON:0007524,4.86e-08,73;UBERON:0000486,5.22e-08,83;UBERON:0007503,8.50e-08,78;UBERON:0003077,8.53e-08,72;UBERON:0007285,8.53e-08,72;UBERON:0006914,2.47e-07,25;UBERON:0000487,4.10e-07,22;UBERON:0001135,5.99e-07,15;UBERON:0001737,9.84e-07,9 | |||
|phase1_expression=12.1724514111273,2.35510576280081,13.2497139850213,1.0007329835313,6.70441641640932,21.8084631025092,2.53299878168311,1.26343974685366,0.261185628199839,5.6518805395347,0,0,0,5.321953177282,5.96515276310248,7.39557661096953,4.21886169616784,1.46062018077475,3.90346239032406,0.369363174230364,2.65200898617529,0.313454721478088,0,0.684372125364421,0.251085279189606,0,0,0,0,0,0.464448369948228,0,0.6024118375565,0.739508020333575,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,5.75381528295886,11.5660528763061,18.048164782892,13.9052658202391,0.795285947051099,1.94653948121054,0.378139268656271,0.886917589850256,0.790513071238134,0.130979075497713,0,0,0,0,0,0,0,0,6.95668425783468,2.58070378531837,8.67851254018986,6.78369530308812,6.29249154314859,1.10047216776027,7.31482382878837,1.29208379584664,1.06729878806013,1.67360306382335,1.20848795132744,0,2.19655851793353,1.10298924103761,2.43042584364528,4.37568668591991,1.79623498100936,1.12611480483322,13.7984973719295,15.1882505530901,6.04565754970344,0,0,0.872188104285069,6.95760732373446,15.9554444697371,6.48804985984772,7.17091551872034,8.15737279056221,10.0921968025615,8.5399196583764,9.8667019366864,0.311211035399766,2.42479209725439,1.30769522490767,5.14615253992767,4.60940739583999,2.34321431833797,0,2.2818872861778,0.298897361103602,0.23486899728753,0,0,2.65400422631361,0.245668634623536,1.13658359293342,1.18800285728205,3.21447008062124,4.55080680969013,5.74894513452991,0.336672227908132,0.125118519871964,0.554128230968366,2.19488810440419,10.1140972613676,4.6573798261045,4.76415169272088,1.61450672119976,1.70845911054854,4.02670612203168,1.20036438433761,1.75189299705346,4.89517026086695,4.83903826462134,1.85653965465393,4.28722822709274,1.7670364197088,3.86609574297657,5.17267381820198,3.90510551768276,3.22406714328449,5.25637836162512,1.54608682530637,0,1.43402297694502,0,0,0.116193942869518,0,0,0,0,1.28648187638577,0,1.39310378409594,2.88751792667834,8.87301000298829,10.1150814046861,3.37415441836875,9.26469370952109,10.4582133164355,7.1181185733329,8.49437241409036,8.63374446551523,3.8474715694639,0,1.40241773803446,0.8231480226628,1.47008711385542,0,0,0.590789906681404,0,0.245976877086227,6.86271241194102,0.329250856225877,1.1240175325762,0,0.185176890317059,2.93227474779292,1.03993478527958,1.44331342025273,0.115930404975077,18.6679823834956,1.01056513432752,0,0.761016608938393,0,0,0,0,0,2.81201501960331,0.671928512795438,0.425325291727159,0.626909658919938,0.290633938513962,0.383382679165211,0,0,0.207328115540772,0,0,0,0,0,0,0,0.600686115687835,1.14330573052231,5.49442313292267,6.10344096366592,6.6004457238855,24.0445391309467,0,0,6.11657668145202,5.2003718455683,2.05765899409714,2.83698264046557,2.39779961114489,12.4390854482588,0,1.64648067356154,0.325736184293735,13.5048940522167,2.37585561880029,3.01439377059586,4.35766729300147,1.3996218765488,0,0,0,1.67737398844108,3.44585807502342,0,14.6229119734255,4.10952645100767,0.895304816199478,0,0,0,0,0,0,0,0,0,0,0,0,1.59498939234882,7.00238729483548,5.15403545029498,0.623912584592421,2.3195768543631,2.99634588564476,4.33423235473039,7.22270639346525,18.1926003244788,2.0694614258501,11.2918351751024,4.24049087645917,0.0868836144680828,1.37060810223918,0.686286847621712,0,0,0,0.303127571446259,1.66435439510497,0,17.1194387394956,1.68808170616869,3.08726103876381,17.1706460002639,8.69902323413396,11.0989205589089,22.2627099667486,1.07946785661859,2.13074070375753,0.410635780069046,4.15403543346897,1.04589340613963,0.241718899183244,7.61924587152482,0.460404944679482,30.3110143154562,10.3791965763829,18.7507913391977,1.35359883872224,5.62211960862228,2.35304930753057,0,10.6607145181804,0,0.510281115829547,2.59099099322567,0,8.12839312631558,3.51182841698397,0.254876273045038,2.49322802678617,5.82074362277664,0.438519753291869,1.3071772551245,1.28225062558195,0.656029291399411,2.60302715731442,2.26690225624989,0,0,1.14853107599234,0,25.7094287750655,2.22342652071881,1.07834031980251,0.307007349452259,0.689182862422653,0.644521469209642,0.580066775656914,0.511359764496605,0.890320356467374,1.15699440752685,0.960950336825531,0.382838137483752,0.4046311234222,24.6368141127561,8.81474571125792,6.970372701606,3.69640296211307,10.1138145760234,6.95946393660058,2.59453906745488,3.00562262158182,5.95453390975468,21.8301803055921,9.34087950226742,3.07077349573601,0,2.22742273548156,2.35484592059769,6.47540847299933,3.29444435683266,4.24124648444471,9.09821167079922,7.92551605865041,2.94880919367287,3.41343617362713,2.19342140668156,6.33900880540533,15.2879900776944,9.89838023675989,3.39024349860728,7.71911480964574,6.6343897524122,6.13831239355268,1.73632660280006,0.655894752046633,6.49313206280653,1.54911749049875,4.7888252430481,1.14729081763241,4.42120684559045,5.7067368237,0,6.96655196482292,3.29294892959902,3.035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| ||
|short_description=p5@FHL2 | |||
}} | }} |
Latest revision as of 04:40, 16 September 2015
Short description: | p5@FHL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_FHL2_5end |
Coexpression cluster: | C4115_mesothelioma_chorionic_Smooth_Sertoli_Prostate_Mesenchymal_tubular |
Association with transcript: | 0bp_to_ENST00000409807, uc002tcu.2_5end |
EntrezGene: | FHL2 |
HGNC: | 3703 |
UniProt: | Q14192 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.26e-19 | 121 |
smooth muscle cell | 3.95e-16 | 43 |
smooth muscle myoblast | 3.95e-16 | 43 |
vascular associated smooth muscle cell | 3.73e-15 | 32 |
fibroblast | 2.87e-13 | 76 |
muscle precursor cell | 5.59e-12 | 58 |
myoblast | 5.59e-12 | 58 |
multi-potent skeletal muscle stem cell | 5.59e-12 | 58 |
muscle cell | 1.64e-11 | 55 |
embryonic cell | 4.06e-09 | 250 |
electrically responsive cell | 5.25e-09 | 61 |
electrically active cell | 5.25e-09 | 61 |
lining cell | 2.88e-08 | 58 |
barrier cell | 2.88e-08 | 58 |
squamous epithelial cell | 3.13e-07 | 63 |