FFCP PHASE1:Hg19::chr22:43411167..43411187,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr22:43411167..43411187,- to FFCP PHASE1:Hg19::chr22:43411167..43411187,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=11252 | |EntrezGene=11252 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8571 | |HGNC=8571 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UNF0 | |UniProt=Q9UNF0 | ||
|association_with_transcript=0bp_to_NM_001184970_5end | |||
|cluster_id=chr22:43411167..43411187,- | |||
|description=CAGE_peak_2_at_PACSIN2_5end | |||
|id=chr22:43411167..43411187,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!8.65e-11!90;UBERON:0003075!6.18e-10!86;UBERON:0007284!6.18e-10!86;UBERON:0001049!1.09e-09!57;UBERON:0005068!1.09e-09!57;UBERON:0006241!1.09e-09!57;UBERON:0007135!1.09e-09!57;UBERON:0001869!1.73e-08!32;UBERON:0001893!3.15e-08!34;UBERON:0002020!5.83e-08!34;UBERON:0003528!5.83e-08!34;UBERON:0002780!8.20e-08!41;UBERON:0001890!8.20e-08!41;UBERON:0006240!8.20e-08!41;UBERON:0007023!8.41e-08!115;UBERON:0002791!8.77e-08!33;UBERON:0002619!9.41e-08!22;UBERON:0003080!1.03e-07!42;UBERON:0002616!1.09e-07!59;UBERON:0000924!2.53e-07!173;UBERON:0006601!2.53e-07!173;UBERON:0001950!4.35e-07!20;UBERON:0000955!5.13e-07!69;UBERON:0006238!5.13e-07!69;UBERON:0001017!8.14e-07!82;UBERON:0000956!8.74e-07!25;UBERON:0000203!8.74e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.10e-07;32!UBERON:0002619;1.30e-07;22!UBERON:0001893;1.89e-07;34!UBERON:0003528;3.90e-07;34!UBERON:0002020;3.90e-07;34!UBERON:0000956;5.49e-07;25!UBERON:0000203;5.49e-07;25!UBERON:0002791;5.90e-07;32!UBERON:0001950;6.01e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,7.27e-10,56;UBERON:0005068,7.27e-10,56;UBERON:0006241,7.27e-10,56;UBERON:0007135,7.27e-10,56;UBERON:0002346,9.27e-10,86;UBERON:0000073,2.13e-09,53;UBERON:0002616,2.13e-09,53;UBERON:0003075,6.31e-09,82;UBERON:0007284,6.31e-09,82;UBERON:0010371,1.22e-08,104;UBERON:0001869,1.40e-08,32;UBERON:0001893,2.58e-08,34;UBERON:0003528,4.81e-08,34;UBERON:0002020,4.81e-08,34;UBERON:0002780,6.86e-08,41;UBERON:0001890,6.86e-08,41;UBERON:0003080,6.86e-08,41;UBERON:0006240,6.86e-08,41;UBERON:0002619,7.51e-08,22;UBERON:0007023,1.27e-07,114;UBERON:0002791,1.42e-07,32;UBERON:0001950,3.49e-07,20;UBERON:0000955,3.56e-07,68;UBERON:0006238,3.56e-07,68;UBERON:0001016,5.90e-07,89;UBERON:0001017,5.93e-07,81;UBERON:0000956,7.19e-07,25;UBERON:0000203,7.19e-07,25;UBERON:0003056,8.79e-07,61 | |||
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| ||
|short_description=p2@PACSIN2 | |||
}} | }} |
Latest revision as of 01:16, 25 September 2015
Short description: | p2@PACSIN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PACSIN2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_001184970_5end |
EntrezGene: | PACSIN2 |
HGNC: | 8571 |
UniProt: | Q9UNF0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 7.27e-10 | 56 |
neural rod | 7.27e-10 | 56 |
future spinal cord | 7.27e-10 | 56 |
neural keel | 7.27e-10 | 56 |
neurectoderm | 9.27e-10 | 86 |
regional part of nervous system | 2.13e-09 | 53 |
regional part of brain | 2.13e-09 | 53 |
neural plate | 6.31e-09 | 82 |
presumptive neural plate | 6.31e-09 | 82 |
ecto-epithelium | 1.22e-08 | 104 |
cerebral hemisphere | 1.40e-08 | 32 |
telencephalon | 2.58e-08 | 34 |
brain grey matter | 4.81e-08 | 34 |
gray matter | 4.81e-08 | 34 |
regional part of forebrain | 6.86e-08 | 41 |
forebrain | 6.86e-08 | 41 |
anterior neural tube | 6.86e-08 | 41 |
future forebrain | 6.86e-08 | 41 |
regional part of cerebral cortex | 7.51e-08 | 22 |
adult organism | 1.27e-07 | 114 |
regional part of telencephalon | 1.42e-07 | 32 |
neocortex | 3.49e-07 | 20 |
brain | 3.56e-07 | 68 |
future brain | 3.56e-07 | 68 |
nervous system | 5.90e-07 | 89 |
central nervous system | 5.93e-07 | 81 |
cerebral cortex | 7.19e-07 | 25 |
pallium | 7.19e-07 | 25 |
pre-chordal neural plate | 8.79e-07 | 61 |