FFCP PHASE1:Hg19::chr22:43398389..43398421,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr22:43398389..43398421,- to FFCP PHASE1:Hg19::chr22:43398389..43398421,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=11252 | |EntrezGene=11252 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8571 | |HGNC=8571 | ||
|TSSclassifier=strong | |||
|UniProt=B0QYG7 | |UniProt=B0QYG7 | ||
|association_with_transcript=24bp_to_ENST00000422336_5end | |||
|cluster_id=chr22:43398389..43398421,- | |||
|description=CAGE_peak_7_at_PACSIN2_5end | |||
|id=chr22:43398389..43398421,- | |||
|ontology_enrichment_celltype=CL:0000192!8.21e-20!42;CL:0000514!8.21e-20!42;CL:0000055!1.34e-18!180;CL:0000359!2.71e-18!32;CL:0000222!2.74e-18!119;CL:0000077!6.59e-17!19;CL:0000187!5.36e-15!54;CL:0000183!2.32e-14!59;CL:0000680!1.58e-13!57;CL:0000056!1.58e-13!57;CL:0000355!1.58e-13!57;CL:0000057!2.56e-12!75;CL:0000393!3.18e-12!60;CL:0000211!3.18e-12!60;CL:0000144!4.68e-10!625;CL:0000048!6.46e-09!430;CL:0000723!1.42e-08!436;CL:0000003!3.68e-08!722;CL:0000034!8.81e-08!444;CL:0000548!1.73e-07!679;CL:0000004!1.73e-07!679;CL:0000255!1.73e-07!679;CL:0000012!3.22e-07!682;CL:0002539!3.79e-07!10;CL:0000213!5.09e-07!57;CL:0000215!5.09e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000077;1.50e-19;19!CL:0000359;7.59e-13;32!CL:1000306;3.84e-10;4!CL:0002547;3.84e-10;4!CL:0000192;7.72e-08;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,1.56e-19,19;CL:0000359,1.86e-13,32;CL:0000222,6.81e-13,121;CL:0000192,6.92e-12,43;CL:0000514,6.92e-12,43;CL:1000306,4.13e-10,4;CL:0002547,4.13e-10,4;CL:0000187,2.20e-08,55;CL:0000680,9.58e-08,58;CL:0000056,9.58e-08,58;CL:0000355,9.58e-08,58;CL:0000393,3.58e-07,61;CL:0000211,3.58e-07,61;CL:0000213,6.00e-07,58;CL:0000215,6.00e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000514;7.72e-08;43 | |||
|ontology_enrichment_disease=DOID:2394!4.22e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;9.46e-14;14!DOID:120;1.38e-07;27!DOID:193;6.47e-07;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.40e-13,14;DOID:120,1.85e-07,27;DOID:193,8.44e-07,29 | |||
|ontology_enrichment_uberon=UBERON:0001637!4.41e-24!42;UBERON:0003509!4.41e-24!42;UBERON:0004572!4.41e-24!42;UBERON:0004535!1.16e-21!110;UBERON:0004872!8.65e-21!84;UBERON:0001009!1.84e-20!113;UBERON:0001981!2.23e-19!60;UBERON:0007500!2.23e-19!60;UBERON:0004537!2.23e-19!60;UBERON:0006965!2.23e-19!60;UBERON:0004573!1.60e-17!33;UBERON:0004571!1.60e-17!33;UBERON:0000055!3.01e-17!69;UBERON:0002049!2.39e-15!79;UBERON:0007798!2.39e-15!79;UBERON:0003914!3.97e-15!118;UBERON:0001134!8.01e-12!61;UBERON:0002036!8.01e-12!61;UBERON:0003082!8.01e-12!61;UBERON:0002385!1.13e-11!63;UBERON:0001015!1.13e-11!63;UBERON:0000383!1.13e-11!63;UBERON:0000490!5.91e-11!138;UBERON:0004290!9.18e-11!70;UBERON:0000947!5.35e-10!21;UBERON:0010191!5.35e-10!21;UBERON:0003081!5.86e-10!216;UBERON:0000914!1.94e-09!83;UBERON:0002329!1.94e-09!83;UBERON:0003077!1.94e-09!83;UBERON:0003059!1.94e-09!83;UBERON:0007282!1.94e-09!83;UBERON:0009618!1.94e-09!83;UBERON:0007285!1.94e-09!83;UBERON:0005256!1.12e-08!143;UBERON:0000486!1.83e-07!82;UBERON:0004237!3.79e-07!10;UBERON:0004695!3.79e-07!10;UBERON:0002111!3.79e-07!10;UBERON:0004178!3.79e-07!10;UBERON:0001135!7.02e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.62e-15;42!UBERON:0003509;1.62e-15;42!UBERON:0004572;1.62e-15;42!UBERON:0004573;4.51e-13;33!UBERON:0004571;4.51e-13;33!UBERON:0004797;3.84e-10;4!UBERON:0000415;3.84e-10;4!UBERON:0007240;3.84e-10;4!UBERON:0005742;3.84e-10;4!UBERON:0005734;3.84e-10;4!UBERON:0004664;3.84e-10;4!UBERON:0004663;3.84e-10;4!UBERON:0007500;2.77e-09;56!UBERON:0001981;2.77e-09;56!UBERON:0004537;2.77e-09;56!UBERON:0000992;4.99e-09;13!UBERON:0002118;5.08e-09;5!UBERON:0000947;6.86e-08;21!UBERON:0010191;6.86e-08;21!UBERON:0000055;1.49e-07;65!UBERON:0000178;3.14e-07;15!UBERON:0000179;3.14e-07;15!UBERON:0000463;3.14e-07;15!UBERON:0000991;9.53e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,9.76e-22,42;UBERON:0003509,9.76e-22,42;UBERON:0004572,9.76e-22,42;UBERON:0004535,1.70e-16,109;UBERON:0001009,8.30e-16,112;UBERON:0000055,1.70e-15,68;UBERON:0007500,2.30e-15,59;UBERON:0001981,2.30e-15,59;UBERON:0004537,2.30e-15,59;UBERON:0006965,2.30e-15,59;UBERON:0004573,6.30e-15,33;UBERON:0004571,6.30e-15,33;UBERON:0002049,1.18e-12,78;UBERON:0007798,1.18e-12,78;UBERON:0004872,1.40e-12,83;UBERON:0000415,4.13e-10,4;UBERON:0007240,4.13e-10,4;UBERON:0005742,4.13e-10,4;UBERON:0005734,4.13e-10,4;UBERON:0004664,4.13e-10,4;UBERON:0004663,4.13e-10,4;UBERON:0003914,1.96e-09,117;UBERON:0000926,4.60e-09,315;UBERON:0004120,4.60e-09,315;UBERON:0006603,4.60e-09,315;UBERON:0002118,5.14e-09,5;UBERON:0000992,6.16e-09,13;UBERON:0003081,3.43e-08,203;UBERON:0000947,8.27e-08,21;UBERON:0010191,8.27e-08,21;UBERON:0003498,1.47e-07,5;UBERON:0005985,1.47e-07,5;UBERON:0000178,2.67e-07,15;UBERON:0000179,2.67e-07,15;UBERON:0000463,2.67e-07,15;UBERON:0001134,5.39e-07,62;UBERON:0002036,5.39e-07,62;UBERON:0003082,5.39e-07,62 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0,0,0,0,0,1.72013755551056,0,0,0.263766978228454,0,0,1.34465029290355,4.82155622419182,0.730310090387373,0.975865597581014,0,0.408001382488506,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0.344745680736619,1.29096936716765,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0.736555271975129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0,0.26591592103773,0,0,0,0.198762407366705,0.860234595106124,1.04142150482278,0,1.25849830862972,0.275118041940067,0.417989933073621,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0,1.77282716330412,3.57504788195691,1.14734648299525,2.12801029319014,0.560677600142307,0,0.98667019366864,0.622422070799533,0.269421344139376,0.490385709340376,0.151357427644931,0,0,0,0.570471821544449,0,0.117434498643765,0.323745888736263,0,0.204154171254893,0,0.103325781175765,0,0,7.28129089550421,2.15585442544872,0,0.125118519871964,0.277064115484183,0,1.22595118319608,0.150238058906597,1.36118619792025,1.25572744982203,0,0,2.10063767259082,0.206105058476878,0,0,1.85653965465393,0.389748020644795,0.504867548488229,0,0.323292113637624,0.355009592516614,0.403008392910561,1.3564847384839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80483547606892,1.6462960453256,0,0,0,0,0,0,0.686271241194102,0,0,0.100528972411631,0,0,0,0,0,0.469634776943287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0.616339038092582,1.03664057770386,0.432359860250884,1.76739406796932,0,0.381988425558278,0,0,0,0.300343057843917,0,0.112131084345361,0.43596006883328,0.51336800074665,1.16344544182,0,0,0.26593811658487,0,0,0,0,2.57360388584666,0,1.64648067356154,0.325736184293735,1.77695974371273,1.58390374586686,3.31583314765545,3.48613383440118,5.89840647974137,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,1.24900292158013,0.473107245101804,0.35142424497814,0,0,0,0.664225598535437,0.368738337083406,0.0868836144680828,0,0,0,0.431428401637234,0.106727557803444,0,0,0,0.496215615637554,0,0.841980283299221,0.256278298511402,0,0.160853921143607,1.48418066444991,0.308419387605311,0.355123450626254,0.0821271560138091,1.03850885836724,0.116210378459959,0,0.200506470303285,0,1.26295892981067,0.728364672026868,0.524497659837696,0,0.15403067420883,0,0,0,0,0.170093705276516,0.863663664408557,0,0.541892875087706,0,0,0,0.223874754722178,0,0,0,0.656029291399411,0,0,0,0,0,0,4.82051789532479,0,0,0,0.137836572484531,0,0,0.170453254832202,0,0,0,0,0,0.464845549297286,0.31481234683064,0.6970372701606,2.7723022215848,2.12922412126809,0,0.74129687641568,0.858749320451947,0,0,0.190630193923825,0.255897791311334,0,1.59101623962968,2.35484592059769,0,1.09814811894422,0.353437207037059,2.02182481573316,0,1.68503382495592,0,0.487426979262569,2.11300293513511,0.409499734223957,1.83827061539827,1.13008116620243,2.2054613741845,1.32687795048244,0.876901770507525,0.578775534266688,0,1.82619339266434,0.92947049429925,1.40847801266121,0.860468113224309,0.294747123039363,2.1400263088875,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,4.56702848308952,4.58782324285425,2.27858874869665,0.952927101831156,1.23408681925858,1.94541993357815,2.16012574895246,1.58625035258854,0,0,0,0,0,0,0,0,0,0.846694330895531,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0.835218521685727,0,1.08182271390393,0,0,0,0,0,0,0,0,0,0,0,0,2.89402633059555,0,0,0.19924798825107,0,0,0,0,0,0.269605053441981,0,0,0,0,1.11136990144637,0,0.0927680981618513,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.91153644677601,0,0,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0.158936578980379,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391969589657511,1.21882889212564,0,0,0,0,0,0,0,0,1.78154502040776,0.19871461170299,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0.543616824294456,0.523014231561666,0.611989305817931,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.17199840701485,1.72844298240254,0.653174720218818,0,0.246277562248017,0.511164065356265,0.113312091520126,0,0,0,0,0.171086837884329,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470531639396343,0,0,1.79105763464249,0.467426619694449,0.554805861502613,0,0,0,0,1.66354016139563,1.70980920641059,0.147855149989634,3.66382564476516,0,2.01841843939137,1.24411862352257,0.53168342911599,0,2.10360652596106,3.42724690951916,4.47557806525128,2.36403256963327,3.54454838240212,3.24823631914946,0.398095888698616,0.800055529326307,0,0.336749488765919,0,1.15571898244382,2.35885750512418,0.521988583930423,1.13352962756136,0.926089897295336,0.734210113519403,2.68633261622231,1.85280868296583,1.75427239662966,1.06013487567529,3.27953865060555,2.53413660979609,0.256241518587947,0.3454303417311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| ||
|short_description=p7@PACSIN2 | |||
}} | }} |
Latest revision as of 01:12, 25 September 2015
Short description: | p7@PACSIN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_PACSIN2_5end |
Coexpression cluster: | NA |
Association with transcript: | 24bp_to_ENST00000422336_5end |
EntrezGene: | PACSIN2 |
HGNC: | 8571 |
UniProt: | B0QYG7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 1.56e-19 | 19 |
vascular associated smooth muscle cell | 1.86e-13 | 32 |
mesodermal cell | 6.81e-13 | 121 |
smooth muscle cell | 6.92e-12 | 43 |
smooth muscle myoblast | 6.92e-12 | 43 |
fibroblast of tunica adventitia of artery | 4.13e-10 | 4 |
fibroblast of the aortic adventitia | 4.13e-10 | 4 |
muscle cell | 2.20e-08 | 55 |
muscle precursor cell | 9.58e-08 | 58 |
myoblast | 9.58e-08 | 58 |
multi-potent skeletal muscle stem cell | 9.58e-08 | 58 |
electrically responsive cell | 3.58e-07 | 61 |
electrically active cell | 3.58e-07 | 61 |
lining cell | 6.00e-07 | 58 |
barrier cell | 6.00e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.40e-13 | 14 |
female reproductive organ cancer | 1.85e-07 | 27 |
reproductive organ cancer | 8.44e-07 | 29 |