FFCP PHASE1:Hg19::chr22:43045588..43045613,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr22:43045588..43045613,- to FFCP PHASE1:Hg19::chr22:43045588..43045613,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1727 | |EntrezGene=1727 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2873 | |HGNC=2873 | ||
|TSSclassifier=strong | |||
|UniProt=P00387 | |UniProt=P00387 | ||
|association_with_transcript=-14bp_to_ENST00000352397_5end | |||
|cluster_id=chr22:43045588..43045613,- | |||
|description=CAGE_peak_11_at_CYB5R3_5end | |||
|id=chr22:43045588..43045613,- | |||
|ontology_enrichment_celltype=CL:0000738!9.68e-09!140;CL:0000115!8.78e-08!35;CL:0000838!3.86e-07!52;CL:0000542!4.31e-07!53;CL:0000051!4.31e-07!53;CL:0002139!4.77e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.45e-11;18!CL:0000789;1.45e-11;18!CL:0002419;1.45e-11;18!CL:0000624;5.81e-10;6!CL:0000084;1.08e-09;25!CL:0000115;3.28e-09;36!CL:0000542;2.40e-08;53!CL:0002139;3.58e-08;24!CL:0000097;1.83e-07;5!CL:1000746;5.19e-07;7!CL:1000612;5.19e-07;7!CL:0000236;6.96e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.17e-14,136;CL:0000838,9.05e-14,52;CL:0000542,2.41e-13,53;CL:0000051,2.41e-13,53;CL:0000791,1.21e-11,18;CL:0000789,1.21e-11,18;CL:0002420,1.21e-11,18;CL:0002419,1.21e-11,18;CL:0000790,1.21e-11,18;CL:0002031,3.87e-11,120;CL:0000115,1.50e-10,36;CL:0000037,3.16e-10,168;CL:0000624,5.38e-10,6;CL:0000988,6.32e-10,177;CL:0000084,1.65e-09,25;CL:0000827,1.65e-09,25;CL:0002078,4.47e-09,45;CL:0002087,4.81e-09,115;CL:0002032,1.88e-08,161;CL:0000837,1.88e-08,161;CL:0002139,2.84e-08,24;CL:0000097,1.03e-07,5;CL:0002028,1.03e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000790;1.45e-11;18!CL:0000051;2.40e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000074;5.19e-07;7!UBERON:0001229;5.19e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002465,6.96e-07,10 | |||
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|phase1_expression=0.54503513781167,0.214100523890983,0.281908808191942,4.00293193412522,0,1.74467704820074,0,0.631719873426831,0.522371256399677,0.491467873003018,2.09340350391728,0.655324116390517,0.791300934685361,0.495065411840187,0.331397375727916,0.672325146451775,0.602694528023977,0,0.487932798790507,0.369363174230364,1.02000345622126,0.313454721478088,0.85870796139317,0.410623275218653,0.502170558379211,0.382067028739756,0.492603536699674,0.472264687882075,3.54027849164014,3.45446458287491,0.464448369948228,0.919421224478927,0.30120591877825,0.369754010166788,0.0774672005803016,0.142169232487422,1.17440175733939,0.553995408531877,3.00816671205213,2.60413044859022,0,0,0,1.01778767145695,0.755751887377619,0.970336244751265,0.929716147622738,0.411167888021826,0,1.43846196161075,0.768482119587302,0,1.37898272294647,1.29096936716765,0,1.88242339542605,0,0.449446968890169,2.14258724659632,0,0.639337125799041,0.989553900560148,0.797854630486527,0.852449501065388,1.16083695451434,0,0,0.251248665256743,0.521482918420201,0.868755378820466,0.605399502633369,0,0.949387162322653,0.845021145247767,0.637812899895131,0,0.673971786878971,0,0.48217676009124,1.99508920618874,0.59675003159727,0.365328307529268,1.75996244461323,0.546138611262131,0,1.28019066769952,2.40237592221607,1.72425731986345,1.98313461835459,0,1.1384259382189,4.69789751496751,6.11637165000366,2.64342657158052,2.80254281490768,1.31692042387539,2.75393678159366,4.32311839024081,4.72883447698871,0.83593247695339,3.58514493296949,4.2610302516126,0,1.33692548262208,5.00830042707223,1.55073726208535,0.812411591295047,0.512365278902701,0.650296737799391,0.986627427622057,0.552700035571697,0.579606171470105,4.30031033169975,1.33770414044857,5.22677619024884,1.13309342697566,3.44898444241729,2.40539211837841,1.01207876807801,0.637130828648193,1.30216690771284,0.950452044448374,1.35517607169996,1.27986611154418,2.49861453104692,0,0,2.62088766192152,2.94184215361858,4.77920532813237,2.43806866313962,0,0.255725123687061,0.361439152384566,0.50133791063589,0.869079113764942,0.795285947051099,0.486634870302636,0.756278537312543,0.221729397462564,0.527008714158756,2.03017567021455,0.728590576585084,0.741568885568859,0.324547393654683,0,0.132957960518865,0.953962497221368,1.14398982156026,1.48583000531826,1.78886166630035,0.860234595106124,1.04142150482278,0,1.67799774483962,0.275118041940067,1.04497483268405,1.03366703667732,0.71153252537342,1.00416183829401,2.01414658554573,0.760272105718513,1.95249646038536,1.10298924103761,0.81014194788176,0.803697554556718,1.57170560838319,0.900891843866578,4.5994991239765,0,1.28241220751285,1.31780417436063,0,0.436094052142534,0.496971951695318,0.25326102332916,0.264818361626438,0.286836620748814,0.354668382198357,1.12135520028461,0,0.24666754841716,0,0.134710672069688,0.163461903113459,0.756787138224657,1.72852777344,0.234321431833797,0.312160076830321,0,0.149448680551801,0,0,0,0.204154171254893,0,0.206651562351531,0,0.247266929278557,0,1.43723628363248,0,0,0,0,0.30648779579902,0.45071417671979,0.226864366320042,0,0.427114777637135,0,0.300091096084402,0.206105058476878,0.257640540045629,0.37223371266318,0.843881661206331,0.779496041289589,0,0.644349290496095,0.161646056818812,0,0.302256294682921,0.169560592310488,0,0,0.573609190778008,0.243947412259191,0.132529768321485,0.232387885739037,0.310983165046111,0.252320850875628,0,0,0.643240938192885,0,0.464367928031979,0,0,0,0.241011029883482,0.110293972732394,0,0.237270619111097,0,0,0,1.4763109092493,2.80483547606892,0.4115740113314,2.94017422771084,0,0,0,0.441463099414651,0,0.343135620597051,1.31700342490351,0,0.502644862058154,0.833296006426766,0,0,0,0.231860809950154,0.352226082707465,1.87676382089396,1.85194205030644,1.52203321787679,0,0.858486162094873,0.246217006087397,0,0,0.93733833986777,0,0,0.179117045405697,0,0.383382679165211,2.95597942737566,1.32072651019839,2.90259361757081,2.88239906833923,2.65109110195398,0.126995788584338,1.14596527667483,0,0,0.205654985406647,0,0,0.448524337381443,0,0.4400297149257,0,7.15312891703765,0,0.531876233169741,0,0.257207374262142,0,0,0.285955987316295,1.08524321078289,1.64648067356154,0,0.355391948742546,0.791951872933429,0,0,0.499864955910285,1.2162378064119,0,0,0.479249710983165,0,0,0.144781306667579,0.205476322550383,0,0,2.36436912242313,4.09692392233083,3.7219480521127,0.76228387266739,0,0.773288812777695,1.34013012267479,0,1.49801404789436,0,1.24324654030811,0.736148950314839,2.50085260529839,0,0.207970861530807,0.535286966391485,0.788512075169673,0.234282829985426,1.50473049863859,0,1.03473071292505,0,0.368738337083406,0.173767228936166,0.783204629850962,0.686286847621712,0.82707210449155,1.07857100409308,4.16237475433433,1.5156378572313,0,0.604780586659361,0.248107807818777,0.306923946576125,1.68396056659844,0.896974044789907,0,0.965123526861645,0,0.154209693802656,0.177561725313127,0.328508624055237,0,0,0.362578348774867,0.601519410909855,0,0,0.364182336013434,0,0.902399225814824,0.15403067420883,0.784349769176855,0,0.31665488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| ||
|short_description=p11@CYB5R3 | |||
}} | }} |
Latest revision as of 00:44, 25 September 2015
Short description: | p11@CYB5R3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_CYB5R3_5end |
Coexpression cluster: | NA |
Association with transcript: | -14bp_to_ENST00000352397_5end |
EntrezGene: | CYB5R3 |
HGNC: | 2873 |
UniProt: | P00387 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.17e-14 | 136 |
lymphoid lineage restricted progenitor cell | 9.05e-14 | 52 |
lymphocyte | 2.41e-13 | 53 |
common lymphoid progenitor | 2.41e-13 | 53 |
mature alpha-beta T cell | 1.21e-11 | 18 |
alpha-beta T cell | 1.21e-11 | 18 |
immature T cell | 1.21e-11 | 18 |
mature T cell | 1.21e-11 | 18 |
immature alpha-beta T cell | 1.21e-11 | 18 |
hematopoietic lineage restricted progenitor cell | 3.87e-11 | 120 |
endothelial cell | 1.50e-10 | 36 |
hematopoietic stem cell | 3.16e-10 | 168 |
CD4-positive, alpha-beta T cell | 5.38e-10 | 6 |
hematopoietic cell | 6.32e-10 | 177 |
T cell | 1.65e-09 | 25 |
pro-T cell | 1.65e-09 | 25 |
meso-epithelial cell | 4.47e-09 | 45 |
nongranular leukocyte | 4.81e-09 | 115 |
hematopoietic oligopotent progenitor cell | 1.88e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.88e-08 | 161 |
endothelial cell of vascular tree | 2.84e-08 | 24 |
mast cell | 1.03e-07 | 5 |
basophil mast progenitor cell | 1.03e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
lymphoid system | 6.96e-07 | 10 |