FFCP PHASE1:Hg19::chr22:42834287..42834305,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=258bp_to_ENST00000428765_5end | |||
|cluster_id=chr22:42834287..42834305,+ | |||
|coexpression_cluster_id=C342 | |||
|description=CAGE_peak_2_at_ENST00000428765_5end | |||
|id=chr22:42834287..42834305,+ | |||
|ontology_enrichment_celltype=CL:0000988!1.31e-18!182;CL:0000738!3.76e-17!140;CL:0000037!1.70e-16!172;CL:0000566!1.70e-16!172;CL:0002087!8.41e-15!119;CL:0002032!2.38e-14!165;CL:0000837!2.38e-14!165;CL:0002031!8.16e-13!124;CL:0000080!1.10e-12!6;CL:0002057!6.45e-11!42;CL:0000860!5.74e-10!45;CL:0000766!2.19e-09!76;CL:0000945!3.27e-09!24;CL:0000826!3.27e-09!24;CL:0000763!3.64e-08!112;CL:0000049!3.64e-08!112;CL:0000557!7.85e-08!71;CL:0002009!8.43e-08!65;CL:0002194!4.51e-07!63;CL:0000576!4.51e-07!63;CL:0000040!4.51e-07!63;CL:0000559!4.51e-07!63;CL:0000839!5.69e-07!70;CL:0000542!6.77e-07!53;CL:0000051!6.77e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.16e-18;24!CL:0000081;1.15e-10;11!CL:0000771;1.99e-07;2!CL:0000094;4.28e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.23e-18,24;CL:0000826,1.23e-18,24;CL:0000988,5.39e-14,177;CL:0000738,1.44e-11,136;CL:0000838,2.81e-11,52;CL:0000542,4.70e-11,53;CL:0000051,4.70e-11,53;CL:0000081,1.01e-10,11;CL:0002032,1.53e-09,161;CL:0000837,1.53e-09,161;CL:0002087,1.58e-09,115;CL:0002031,4.40e-09,120;CL:0000037,4.43e-09,168;CL:0000771,1.87e-07,2;CL:0000094,4.15e-07,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060058!2.32e-10!10 | |||
|ontology_enrichment_disease_v019=DOID:2355;3.08e-14;1!DOID:630;4.53e-14;1!DOID:0050177;4.53e-14;1!DOID:0050427;4.53e-14;1!DOID:0060058;6.74e-12;10!DOID:74;9.25e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,3.08e-14,1;DOID:630,4.53e-14,1;DOID:0050177,4.53e-14,1;DOID:0050427,4.53e-14,1;DOID:0060058,7.54e-12,10;DOID:74,9.25e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0002390!5.44e-14!102;UBERON:0003061!5.44e-14!102;UBERON:0002193!3.18e-13!112;UBERON:0002371!1.75e-07!80;UBERON:0000178!9.03e-07!15;UBERON:0000179!9.03e-07!15;UBERON:0000463!9.03e-07!15;UBERON:0002405!9.49e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;8.42e-12;10!UBERON:0000178;4.77e-08;15!UBERON:0000179;4.77e-08;15!UBERON:0000463;4.77e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,7.26e-12,10;UBERON:0000358,7.26e-12,10;UBERON:0000307,7.26e-12,10;UBERON:0000091,7.26e-12,10;UBERON:0000087,7.26e-12,10;UBERON:0007010,7.26e-12,10;UBERON:0007806,7.26e-12,10;UBERON:0008780,7.26e-12,10;UBERON:0005728,7.26e-12,10;UBERON:0000178,4.32e-08,15;UBERON:0000179,4.32e-08,15;UBERON:0000463,4.32e-08,15 | |||
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| ||
|short_description=p2@ENST00000428765 | |||
}} | }} |
Latest revision as of 21:47, 28 July 2015
Short description: | p2@ENST00000428765 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000428765_5end |
Coexpression cluster: | C342_xeroderma_b_B_splenic_plasma_Burkitt_thymus |
Association with transcript: | 258bp_to_ENST00000428765_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.23e-18 | 24 |
pro-B cell | 1.23e-18 | 24 |
hematopoietic cell | 5.39e-14 | 177 |
leukocyte | 1.44e-11 | 136 |
lymphoid lineage restricted progenitor cell | 2.81e-11 | 52 |
lymphocyte | 4.70e-11 | 53 |
common lymphoid progenitor | 4.70e-11 | 53 |
blood cell | 1.01e-10 | 11 |
hematopoietic oligopotent progenitor cell | 1.53e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.53e-09 | 161 |
nongranular leukocyte | 1.58e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 4.40e-09 | 120 |
hematopoietic stem cell | 4.43e-09 | 168 |
eosinophil | 1.87e-07 | 2 |
granulocyte | 4.15e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 7.26e-12 | 10 |
blastocyst | 7.26e-12 | 10 |
blastula | 7.26e-12 | 10 |
bilaminar disc | 7.26e-12 | 10 |
inner cell mass | 7.26e-12 | 10 |
cleaving embryo | 7.26e-12 | 10 |
connecting stalk | 7.26e-12 | 10 |
inner cell mass derived epiblast | 7.26e-12 | 10 |
extraembryonic mesoderm | 7.26e-12 | 10 |
blood | 4.32e-08 | 15 |
haemolymphatic fluid | 4.32e-08 | 15 |
organism substance | 4.32e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
anemia | 3.08e-14 | 1 |
genetic disease | 4.53e-14 | 1 |
monogenic disease | 4.53e-14 | 1 |
xeroderma pigmentosum | 4.53e-14 | 1 |
lymphoma | 7.54e-12 | 10 |
hematopoietic system disease | 9.25e-08 | 2 |