FFCP PHASE1:Hg19::chr22:41488873..41488883,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr22:41488873..41488883,+ to FFCP PHASE1:Hg19::chr22:41488873..41488883,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2033 | |EntrezGene=2033 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=3373 | |HGNC=3373 | ||
|TSSclassifier=strong | |||
|UniProt=Q09472,Q7Z6C1 | |UniProt=Q09472,Q7Z6C1 | ||
|association_with_transcript=259bp_to_NM_001429,uc003azl.3_5end | |||
|cluster_id=chr22:41488873..41488883,+ | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_10_at_EP300_5end | |||
|id=chr22:41488873..41488883,+ | |||
|ontology_enrichment_celltype=CL:0000766!5.00e-09!76;CL:0000860!7.62e-08!45;CL:0002057!1.30e-07!42;CL:0000738!1.91e-07!140;CL:0000839!3.18e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0000775;8.95e-37;3!CL:0000094;3.56e-24;8!CL:0000097;1.76e-21;5!CL:0000081;1.13e-17;11!CL:0000163;3.22e-12;9!CL:0000771;4.04e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,8.98e-37,3;CL:0000094,3.68e-24,8;CL:0000097,1.70e-21,5;CL:0002028,1.70e-21,5;CL:0000081,1.16e-17,11;CL:0000766,9.23e-15,72;CL:0000163,3.16e-12,9;CL:0000763,1.83e-09,108;CL:0000049,1.83e-09,108;CL:0000738,2.93e-07,136;CL:0000771,4.17e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0005425;5.70e-13;1!UBERON:0007297;2.66e-07;2!UBERON:0006965;4.04e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.18e-09!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001301;2.46e-13;1!UBERON:0000941;5.70e-13;1!UBERON:0002171;5.70e-13;1!UBERON:0001785;5.70e-13;1!UBERON:0002464;5.70e-13;1!UBERON:0004904;5.70e-13;1!UBERON:0001021;5.70e-13;1!UBERON:0006518;5.70e-13;1!UBERON:0008949;5.70e-13;1!UBERON:0000101;5.70e-13;1!UBERON:0002167;5.70e-13;1!UBERON:0003714;4.04e-07;2!UBERON:0005162;4.04e-07;2!UBERON:0000122;4.04e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,2.62e-13,1;UBERON:0002171,2.95e-13,1;UBERON:0006518,2.95e-13,1;UBERON:0008949,2.95e-13,1;UBERON:0000101,2.95e-13,1;UBERON:0002167,2.95e-13,1;UBERON:0000941,3.76e-13,1;UBERON:0001785,3.76e-13,1;UBERON:0002464,3.76e-13,1;UBERON:0004904,3.76e-13,1;UBERON:0001021,3.76e-13,1;UBERON:0003902,3.76e-13,1;UBERON:0005425,3.76e-13,1;UBERON:0003714,3.28e-07,2;UBERON:0005162,3.28e-07,2;UBERON:0000122,3.28e-07,2 | |||
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| ||
|short_description=p10@EP300 | |||
}} | }} |
Latest revision as of 21:02, 24 September 2015
Short description: | p10@EP300 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_EP300_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | 259bp_to_NM_001429, uc003azl.3_5end |
EntrezGene: | EP300 |
HGNC: | 3373 |
UniProt: | Q09472Q7Z6C1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 8.98e-37 | 3 |
granulocyte | 3.68e-24 | 8 |
mast cell | 1.70e-21 | 5 |
basophil mast progenitor cell | 1.70e-21 | 5 |
blood cell | 1.16e-17 | 11 |
myeloid leukocyte | 9.23e-15 | 72 |
endocrine cell | 3.16e-12 | 9 |
myeloid cell | 1.83e-09 | 108 |
common myeloid progenitor | 1.83e-09 | 108 |
leukocyte | 2.93e-07 | 136 |
eosinophil | 4.17e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
epididymis | 2.62e-13 | 1 |
lower lobe of right lung | 2.95e-13 | 1 |
right lung lobe | 2.95e-13 | 1 |
lower lobe of lung | 2.95e-13 | 1 |
lobe of lung | 2.95e-13 | 1 |
right lung | 2.95e-13 | 1 |
cranial nerve II | 3.76e-13 | 1 |
cranial nerve | 3.76e-13 | 1 |
nerve trunk | 3.76e-13 | 1 |
nerve connecting eye with brain | 3.76e-13 | 1 |
nerve | 3.76e-13 | 1 |
retinal neural layer | 3.76e-13 | 1 |
presumptive neural retina | 3.76e-13 | 1 |
neural tissue | 3.28e-07 | 2 |
multi cell component structure | 3.28e-07 | 2 |
neuron projection bundle | 3.28e-07 | 2 |