FFCP PHASE1:Hg19::chr22:40929812..40929868,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr22:40929812..40929868,- to FFCP PHASE1:Hg19::chr22:40929812..40929868,-: NSchange) |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57591 | |EntrezGene=57591 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14334 | |HGNC=14334 | ||
|TSSclassifier=strong | |||
|UniProt=B0QY74 | |UniProt=B0QY74 | ||
|association_with_transcript=0bp_to_ENST00000422851_5end | |||
|cluster_id=chr22:40929812..40929868,- | |||
|description=CAGE_peak_3_at_MKL1_5end | |||
|id=chr22:40929812..40929868,- | |||
|ontology_enrichment_celltype=CL:0000084!1.04e-09!25;CL:0000827!1.04e-09!25;CL:0000791!7.48e-08!18;CL:0000789!7.48e-08!18;CL:0002420!7.48e-08!18;CL:0002419!7.48e-08!18;CL:0000790!7.48e-08!18;CL:0000542!1.44e-07!53;CL:0000051!1.44e-07!53;CL:0000838!1.50e-07!52 | |||
|ontology_enrichment_celltype_v019=CL:0000084;1.19e-10;25!CL:0000791;9.43e-09;18!CL:0000789;9.43e-09;18!CL:0002419;9.43e-09;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,4.13e-11,25;CL:0000827,4.13e-11,25;CL:0000542,2.99e-09,53;CL:0000051,2.99e-09,53;CL:0000838,3.12e-09,52;CL:0000791,3.29e-09,18;CL:0000789,3.29e-09,18;CL:0002420,3.29e-09,18;CL:0002419,3.29e-09,18;CL:0000790,3.29e-09,18 | |||
|ontology_enrichment_development_v019=CL:0000790;9.43e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.24e-12!115;UBERON:0001869!2.08e-10!32;UBERON:0001893!5.39e-10!34;UBERON:0002619!9.27e-10!22;UBERON:0002791!1.88e-09!33;UBERON:0000956!3.23e-09!25;UBERON:0000203!3.23e-09!25;UBERON:0001950!7.05e-09!20;UBERON:0002020!1.12e-08!34;UBERON:0003528!1.12e-08!34;UBERON:0002780!1.55e-08!41;UBERON:0001890!1.55e-08!41;UBERON:0006240!1.55e-08!41;UBERON:0003080!6.21e-08!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.14e-10;22!UBERON:0001950;1.28e-09;20!UBERON:0000956;2.14e-09;25!UBERON:0000203;2.14e-09;25!UBERON:0001869;3.55e-09;32!UBERON:0001893;5.46e-09;34!UBERON:0002791;3.83e-08;32!UBERON:0003528;2.57e-07;34!UBERON:0002020;2.57e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,9.14e-11,22;UBERON:0001869,3.91e-10,32;UBERON:0007023,1.03e-09,114;UBERON:0001950,1.05e-09,20;UBERON:0001893,1.78e-09,34;UBERON:0000956,2.01e-09,25;UBERON:0000203,2.01e-09,25;UBERON:0002791,6.54e-09,32;UBERON:0003528,7.49e-08,34;UBERON:0002020,7.49e-08,34;UBERON:0002780,1.06e-07,41;UBERON:0001890,1.06e-07,41;UBERON:0003080,1.06e-07,41;UBERON:0006240,1.06e-07,41 | |||
|phase1_expression=5.81370813665781,2.14100523890983,6.20199378022273,0,2.23480547213644,1.74467704820074,5.06599756336621,0,0,13.02389863458,10.4670175195864,0.655324116390517,1.58260186937072,0,0,0.672325146451775,1.20538905604795,0.730310090387373,0,0.738726348460727,0,0.626909442956176,0.85870796139317,0.273748850145768,2.13422487311165,2.29240217243854,2.29881650459848,2.91229890860613,1.18009283054671,2.30297638858328,0.77408061658038,0,0,0,3.02122082263176,5.54460006700944,0,0.553995408531877,1.00272223735071,0.217010870715852,0.223915474239924,0.32389366601898,0.257575567634187,1.16318591023652,3.40088349319928,2.18325655069035,0.697287110717054,1.6446715520873,2.78735733805593,0.575384784644301,1.0246428261164,0.709446689665756,0,1.93645405075148,0,1.88242339542605,3.547779950752,2.9214052977861,2.75475503133812,1.60464513538047,0.639337125799041,0.329851300186716,0.797854630486527,1.27867425159808,2.32167390902867,1.13477044938228,1.86846674698672,0.251248665256743,1.5644487552606,0.65156653411535,0.605399502633369,1.84138817993782,2.21523671208619,0.422510572623884,0.212604299965044,0,0.112328631146495,0.150176892841506,0,0,0,0,0,0,0.889509253863555,0.426730222566507,0,1.72425731986345,0,0,1.1384259382189,0,0,0,0.560508562981536,0,4.13090517239049,2.75107533924415,5.14003747498773,2.84217042164153,3.58514493296949,2.36723902867367,0,6.46180649934007,3.82987679717288,2.43687284041983,4.33286182024025,4.86747014957566,4.55207716459574,7.5641436117691,4.69795030235942,6.37566788617116,6.3763222159686,5.08327573370455,2.09071047609954,6.23201384836614,6.51474839123266,4.12352934579156,5.06039384039006,4.14135038621326,3.90650072313851,4.75226022224187,4.36667845325541,6.01537072425766,3.74792179657038,4.2619905367923,1.64225599384209,4.23374160771938,2.94184215361858,1.88271725047639,0,2.01210257911091,0.383587685530591,0.722878304769133,2.00535164254356,0.289693037921647,1.5905718941022,0.973269740605272,0,1.33037638477538,0.702678285545008,2.03017567021455,0,0,0.649094787309367,1.21890816109487,0.398873881556595,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.47274756525787,0.886413581652058,0,0,1.06400514659507,1.68203280042692,16.0123493594557,9.12669929143492,1.55605517699883,1.88594940897563,0.817309515567294,3.32986340818849,6.91411109375999,0.234321431833797,0,0,0.149448680551801,0.352303495931295,0.161872944368132,0.702254033511242,0,0,0,0,0,9.10161361938026,2.87447256726495,0,0.125118519871964,0,3.07284334616587,0.612975591598039,0.150238058906597,2.38207584636044,10.0458195985763,2.98980344345994,1.48352330811693,4.50136644126603,2.06105058476878,9.27505944164265,3.90845398296339,4.05063197379039,2.63079913935236,9.59248342127635,1.38074847963449,0,15.2654124782144,7.65715946530066,3.73033303083073,0,0,0,0.243947412259191,0.662648841607426,0.813357600086629,0.621966330092223,0,0.72995471815166,0,0.643240938192885,2.76269842704961,0,0,0,0,0.482022059766964,0.220587945464788,0.435758888184812,0.237270619111097,0.269662616320329,0.196221465125346,0,0,1.40241773803446,4.115740113314,8.82052268313252,0,0.982827216677626,0,11.9195036841956,0,0.857839051492628,1.64625428112938,1.1240175325762,0.100528972411631,0,0.325808305310325,0,0,0,4.46153038096122,0,0,0,0.790204397959275,0,0,1.17002132569619,0.594524649154913,0.93733833986777,0.503946384596579,0.283550194484773,1.07470227243418,0.290633938513962,0.383382679165211,0,0,0.207328115540772,0,0,0.063497894292169,0.381988425558278,0,1.71072446022705,0.308482478109971,0,0,0.560655421726804,0.87192013766656,0.95339771567235,4.78305348303778,14.3062578340753,2.535908257668,1.32969058292435,1.04007436911366,2.05765899409714,0,1.3321108950805,3.43147184779554,11.9376753186117,7.40916303102692,2.93162565864362,3.909311436168,4.75171123760058,0.301439377059586,0,0.199945982364114,0,0,0,1.4377491329495,0,1.42636905040718,0.579125226670317,0.821905290201534,1.25342674267927,1.56919201590938,2.75843064282698,1.72502059887614,2.31017465303547,0.254094624222463,1.30139853857622,0,0,0,0,0,0.414415513436035,0.24538298343828,0,0,1.87173775377726,0.535286966391485,0.788512075169673,0.234282829985426,0.601892199455438,0,6.2083842775503,3.98535359121262,5.34670588770939,0,1.37060810223918,0,3.10152039184331,1.2942852049117,1.60091336705167,0,0,1.5119514666484,3.47350930946288,5.21770709179412,2.24528075546459,2.94720043288112,5.62877973973374,3.21707842287215,0,1.3878872442239,1.77561725313127,0.328508624055237,0,0.464841513839837,0,1.80455823272956,0,0.918515585316854,0.364182336013434,0,0,0,0.784349769176855,0,0,0,0,0.863663664408557,1.54227252690289,2.43851793789468,2.50844886927427,0,0,0,0,0,0,0,0.325378394664303,2.88514832613622,2.19766715564024,2.80532299729999,1.14853107599234,2.60024098414608,0,0.193341436584244,1.3864375540318,2.45605879561807,1.65403886981437,5.26359199854541,1.74020032697074,0.511359764496605,3.11612124763581,1.4875642382488,0.960950336825531,2.67986696238627,0.6069466851333,0,0.62962469366128,0,3.6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| ||
|short_description=p3@MKL1 | |||
}} | }} |
Latest revision as of 20:10, 24 September 2015
Short description: | p3@MKL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MKL1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000422851_5end |
EntrezGene: | MKL1 |
HGNC: | 14334 |
UniProt: | B0QY74 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 4.13e-11 | 25 |
pro-T cell | 4.13e-11 | 25 |
lymphocyte | 2.99e-09 | 53 |
common lymphoid progenitor | 2.99e-09 | 53 |
lymphoid lineage restricted progenitor cell | 3.12e-09 | 52 |
mature alpha-beta T cell | 3.29e-09 | 18 |
alpha-beta T cell | 3.29e-09 | 18 |
immature T cell | 3.29e-09 | 18 |
mature T cell | 3.29e-09 | 18 |
immature alpha-beta T cell | 3.29e-09 | 18 |
Ontology term | p-value | n |
---|---|---|
regional part of cerebral cortex | 9.14e-11 | 22 |
cerebral hemisphere | 3.91e-10 | 32 |
adult organism | 1.03e-09 | 114 |
neocortex | 1.05e-09 | 20 |
telencephalon | 1.78e-09 | 34 |
cerebral cortex | 2.01e-09 | 25 |
pallium | 2.01e-09 | 25 |
regional part of telencephalon | 6.54e-09 | 32 |
brain grey matter | 7.49e-08 | 34 |
gray matter | 7.49e-08 | 34 |
regional part of forebrain | 1.06e-07 | 41 |
forebrain | 1.06e-07 | 41 |
anterior neural tube | 1.06e-07 | 41 |
future forebrain | 1.06e-07 | 41 |