FFCP PHASE1:Hg19::chr22:38713312..38713323,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr22:38713312..38713323,- to FFCP PHASE1:Hg19::chr22:38713312..38713323,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1454 | |EntrezGene=1454 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2453 | |HGNC=2453 | ||
|TSSclassifier=strong | |||
|UniProt=P49674 | |UniProt=P49674 | ||
|association_with_transcript=-67bp_to_ENST00000402865_5end | |||
|cluster_id=chr22:38713312..38713323,- | |||
|description=CAGE_peak_9_at_CSNK1E_5end | |||
|id=chr22:38713312..38713323,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!2.47e-15!169;UBERON:0000924!2.55e-15!173;UBERON:0006601!2.55e-15!173;UBERON:0000033!5.11e-11!123;UBERON:0000481!5.88e-11!347;UBERON:0000477!1.18e-10!286;UBERON:0000153!1.23e-10!129;UBERON:0007811!1.23e-10!129;UBERON:0000468!4.18e-10!659;UBERON:0000922!4.21e-10!612;UBERON:0003075!5.10e-10!86;UBERON:0007284!5.10e-10!86;UBERON:0002346!6.42e-10!90;UBERON:0007023!8.44e-10!115;UBERON:0000073!1.60e-09!94;UBERON:0001016!1.60e-09!94;UBERON:0000483!2.42e-09!309;UBERON:0002050!5.52e-09!605;UBERON:0005423!5.52e-09!605;UBERON:0000119!5.70e-09!312;UBERON:0000475!5.88e-09!365;UBERON:0000923!1.15e-08!604;UBERON:0005291!1.15e-08!604;UBERON:0006598!1.15e-08!604;UBERON:0002532!1.15e-08!604;UBERON:0005743!1.25e-08!86;UBERON:0003056!1.33e-08!61;UBERON:0000467!1.81e-08!625;UBERON:0000480!2.92e-08!626;UBERON:0001017!6.01e-08!82;UBERON:0001049!2.47e-07!57;UBERON:0005068!2.47e-07!57;UBERON:0006241!2.47e-07!57;UBERON:0007135!2.47e-07!57;UBERON:0003080!6.19e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;3.01e-07;41!UBERON:0001890;3.01e-07;41!UBERON:0002791;7.16e-07;32!UBERON:0000956;7.22e-07;25!UBERON:0000203;7.22e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.21e-16,132;UBERON:0004121,2.61e-14,171;UBERON:0000924,2.61e-14,171;UBERON:0006601,2.61e-14,171;UBERON:0010371,1.26e-13,104;UBERON:0003075,1.53e-11,82;UBERON:0007284,1.53e-11,82;UBERON:0002346,3.50e-11,86;UBERON:0007023,4.84e-11,114;UBERON:0003056,1.15e-09,61;UBERON:0000073,6.83e-09,53;UBERON:0002616,6.83e-09,53;UBERON:0001049,7.63e-09,56;UBERON:0005068,7.63e-09,56;UBERON:0006241,7.63e-09,56;UBERON:0007135,7.63e-09,56;UBERON:0001017,1.87e-08,81;UBERON:0002780,2.45e-08,41;UBERON:0001890,2.45e-08,41;UBERON:0003080,2.45e-08,41;UBERON:0006240,2.45e-08,41;UBERON:0003528,4.42e-08,34;UBERON:0002020,4.42e-08,34;UBERON:0001893,5.30e-08,34;UBERON:0002791,5.82e-08,32;UBERON:0001016,9.95e-08,89;UBERON:0000922,1.83e-07,592;UBERON:0000483,3.40e-07,306;UBERON:0001869,5.68e-07,32;UBERON:0000119,6.41e-07,309;UBERON:0005423,6.54e-07,581;UBERON:0000956,9.39e-07,25;UBERON:0000203,9.39e-07,25 | |||
|phase1_expression=0.181678379270557,0.856402095563933,1.12763523276777,0,0,0,5.06599756336621,0.631719873426831,1.30592814099919,0,0,0,0.527533956456907,0.990130823680373,0.662794751455832,0,0,0,1.46379839637152,0.123121058076788,0.408001382488506,0,1.43117993565528,0.958120975510189,1.75759695432724,0.0764134057479513,0.164201178899891,0.157421562627358,0.786728553697808,0.767658796194425,0.154816123316076,0,0,0,0.0774672005803016,0,0.880801318004542,0,0.601633342410425,0.434021741431704,0.223915474239924,0.647787332037959,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,1.32208974556972,0,0.569212969109448,0,0,0,0.560508562981536,0.790152254325231,0,0,0.616804496998528,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0.604820229674197,0.802320587350522,0.434473211648397,0,2.01210257911091,0.895037932904712,0.722878304769133,0,0.724232594804119,0,1.94653948121054,0.945348171640679,1.33037638477538,1.40535657109002,0.327447688744282,0.364295288292542,1.11235332835329,0,0,0.531831842075461,1.66943437013739,1.71598473234038,0.371457501329565,0.79504962946682,0.860234595106124,0.347140501607594,0.56530794192401,0.838998872419812,0.275118041940067,0.835979866147242,0.258416759169329,0.35576626268671,0,0.805658634218294,0,2.19655851793353,0,0.81014194788176,0.535798369704479,0.44905874525234,0.337834441449967,1.53316637465883,0,0.549605231791222,0,0,1.3082821564276,0,0.886413581652058,1.85372853138506,0,2.12801029319014,1.68203280042692,2.1349799145941,3.45334567784024,0,0.134710672069688,0.326923806226917,0,0.576175924479999,0.70296429550139,0.624320153660641,0,1.94283284717341,0,0.323745888736263,0.140450806702248,0.61246251376468,0.982674538494144,1.34323515528495,0,0.989067717114227,0,0.718618141816238,1.0100166837244,1.00094815897571,1.10825646193673,0.877955241761676,0.919463387397059,1.65261864797256,1.13432183160021,0.358779271377724,0.640672166455702,1.05965950579781,0,0,0,0.744467425326359,0.675105328965065,0.194874010322397,0,0.276149695926898,0.161646056818812,0,0.201504196455281,0.339121184620975,0.966304265816484,1.09098448236334,0.573609190778008,0.487894824518382,0.927708378250397,0.348581828608555,0.829288440122964,1.00928340350251,0,0,1.92972281457866,4.14404764057442,0.464367928031979,1.44375896333917,1.53798840051797,0.842923450390509,0.723033089650446,1.43382164552112,0.217879444092406,0.71181185733329,1.61797569792197,1.56977172100277,0.769494313892781,0,0,0.4115740113314,0,0,0.982827216677626,0,0,0.368965315629341,0.686271241194102,0.439001141634502,0,0.502644862058154,1.11106134190236,0.325808305310325,0,0,1.507095264676,0.587043471179108,0.721832238805369,0,0.190254152234598,0.790204397959275,0.858486162094873,0,0.234004265139238,0.148631162288728,0,0.839910640994298,0.141775097242386,1.34337784054272,1.74380363108377,1.15014803749563,0,0.088048434013226,0.414656231081544,0.432359860250884,0,1.46045156871989,0.763976851116555,0,1.71072446022705,1.02827492703324,0.600686115687835,0.857479297891735,0.112131084345361,0,0.4400297149257,0.517086863031111,0,0.845302752556,0.26593811658487,1.04007436911366,0.514414748524284,1.41849132023278,0.266422179016099,0.857867961948885,0.542621605391443,0,0.65147236858747,1.77695974371273,0,1.20575750823834,1.74306691720059,1.09970290300263,0,0,0,0.479249710983165,0,0,0.723906533337896,0.205476322550383,0.716243852959582,0.112085143993527,0.788123040807709,0.646882724578552,1.28343036279748,0.76228387266739,2.60279707715243,3.09315525111078,3.35032530668698,1.91381625495949,0,0,0.414415513436035,1.2269149171914,1.50051156317903,0,1.03985430765404,1.42743191037729,0.473107245101804,0.937131319941706,0,0,3.10419213877515,0,2.21243002250044,0.434418072340414,0.391602314925481,0,0,0.215714200818617,0.213455115606889,0,0,1.20956117331872,0.248107807818777,0.920771839728375,1.12264037773229,0.256278298511402,0.511707249066704,1.28683136914886,0,0.462629081407967,0.887808626565635,0.492762936082855,0,0.116210378459959,0.241718899183244,1.00253235151642,1.47329582297434,0,0.182091168006717,0.786746489756545,0.902399225814824,0.462092022626489,0,0,0.73886140225013,1.13733384070897,0,0.215915916102139,0,0,2.00675909541941,0.254876273045038,1.66215201785745,2.0148727924996,0.219259876645935,0,1.28225062558195,0.984043937099117,0.325378394664303,0.412164046590889,0.0915694648183434,0.330037999682352,1.72279661398852,0,0,0.870036464629098,0.154048617114644,0,0.275673144969061,0.537101224341368,0.435050081742686,0.426133137080504,0.534192213880424,0.826424576804891,1.53752053892085,1.14851441245126,0.10115778085555,0,0.62962469366128,2.0911118104818,1.23213432070436,0.532306030317022,1.73986598415015,0.55597265731176,0.143124886741991,0.372158369359667,0.316379424718726,0.762520775695299,0.511795582622668,0.42793898803392,0.636406495851874,0,0.719489830333259,0.274537029736055,0.353437207037059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|phase1_expression=0.181678379270557,0.856402095563933,1.12763523276777,0,0,0,5.06599756336621,0.631719873426831,1.30592814099919,0,0,0,0.527533956456907,0.990130823680373,0.662794751455832,0,0,0,1.46379839637152,0.123121058076788,0.408001382488506,0,1.43117993565528,0.958120975510189,1.75759695432724,0.0764134057479513,0.164201178899891,0.157421562627358,0.786728553697808,0.767658796194425,0.154816123316076,0,0,0,0.0774672005803016,0,0.880801318004542,0,0.601633342410425,0.434021741431704,0.223915474239924,0.647787332037959,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,1.32208974556972,0,0.569212969109448,0,0,0,0.560508562981536,0.790152254325231,0,0,0.616804496998528,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0.604820229674197,0.802320587350522,0.434473211648397,0,2.01210257911091,0.895037932904712,0.722878304769133,0,0.724232594804119,0,1.94653948121054,0.945348171640679,1.33037638477538,1.40535657109002,0.327447688744282,0.364295288292542,1.11235332835329,0,0,0.531831842075461,1.66943437013739,1.71598473234038,0.371457501329565,0.79504962946682,0.860234595106124,0.347140501607594,0.56530794192401,0.838998872419812,0.275118041940067,0.835979866147242,0.258416759169329,0.35576626268671,0,0.805658634218294,0,2.19655851793353,0,0.81014194788176,0.535798369704479,0.44905874525234,0.337834441449967,1.53316637465883,0,0.549605231791222,0,0,1.3082821564276,0,0.886413581652058,1.85372853138506,0,2.12801029319014,1.68203280042692,2.1349799145941,3.45334567784024,0,0.134710672069688,0.326923806226917,0,0.576175924479999,0.70296429550139,0.624320153660641,0,1.94283284717341,0,0.323745888736263,0.140450806702248,0.61246251376468,0.982674538494144,1.34323515528495,0,0.989067717114227,0,0.718618141816238,1.0100166837244,1.00094815897571,1.10825646193673,0.877955241761676,0.919463387397059,1.65261864797256,1.13432183160021,0.358779271377724,0.640672166455702,1.05965950579781,0,0,0,0.744467425326359,0.675105328965065,0.194874010322397,0,0.276149695926898,0.161646056818812,0,0.201504196455281,0.339121184620975,0.966304265816484,1.09098448236334,0.573609190778008,0.487894824518382,0.927708378250397,0.348581828608555,0.829288440122964,1.00928340350251,0,0,1.92972281457866,4.14404764057442,0.464367928031979,1.44375896333917,1.53798840051797,0.842923450390509,0.723033089650446,1.43382164552112,0.217879444092406,0.71181185733329,1.61797569792197,1.56977172100277,0.769494313892781,0,0,0.4115740113314,0,0,0.982827216677626,0,0,0.368965315629341,0.686271241194102,0.439001141634502,0,0.502644862058154,1.11106134190236,0.325808305310325,0,0,1.507095264676,0.587043471179108,0.721832238805369,0,0.190254152234598,0.790204397959275,0.858486162094873,0,0.234004265139238,0.148631162288728,0,0.839910640994298,0.141775097242386,1.34337784054272,1.74380363108377,1.15014803749563,0,0.088048434013226,0.414656231081544,0.432359860250884,0,1.46045156871989,0.763976851116555,0,1.71072446022705,1.02827492703324,0.600686115687835,0.857479297891735,0.112131084345361,0,0.4400297149257,0.517086863031111,0,0.845302752556,0.26593811658487,1.04007436911366,0.514414748524284,1.41849132023278,0.266422179016099,0.857867961948885,0.542621605391443,0,0.65147236858747,1.77695974371273,0,1.20575750823834,1.74306691720059,1.09970290300263,0,0,0,0.479249710983165,0,0,0.723906533337896,0.205476322550383,0.716243852959582,0.112085143993527,0.788123040807709,0.646882724578552,1.28343036279748,0.76228387266739,2.60279707715243,3.09315525111078,3.35032530668698,1.91381625495949,0,0,0.414415513436035,1.2269149171914,1.50051156317903,0,1.03985430765404,1.42743191037729,0.473107245101804,0.937131319941706,0,0,3.10419213877515,0,2.21243002250044,0.434418072340414,0.391602314925481,0,0,0.215714200818617,0.213455115606889,0,0,1.20956117331872,0.248107807818777,0.920771839728375,1.12264037773229,0.256278298511402,0.511707249066704,1.28683136914886,0,0.462629081407967,0.887808626565635,0.492762936082855,0,0.116210378459959,0.241718899183244,1.00253235151642,1.47329582297434,0,0.182091168006717,0.786746489756545,0.902399225814824,0.462092022626489,0,0,0.73886140225013,1.13733384070897,0,0.215915916102139,0,0,2.00675909541941,0.254876273045038,1.66215201785745,2.0148727924996,0.219259876645935,0,1.28225062558195,0.984043937099117,0.325378394664303,0.412164046590889,0.0915694648183434,0.330037999682352,1.72279661398852,0,0,0.870036464629098,0.154048617114644,0,0.275673144969061,0.537101224341368,0.435050081742686,0.426133137080504,0.534192213880424,0.826424576804891,1.53752053892085,1.14851441245126,0.10115778085555,0,0.62962469366128,2.0911118104818,1.23213432070436,0.532306030317022,1.73986598415015,0.55597265731176,0.143124886741991,0.372158369359667,0.316379424718726,0.762520775695299,0.511795582622668,0.42793898803392,0.636406495851874,0,0.719489830333259,0.274537029736055,0.353437207037059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| ||
|short_description=p9@CSNK1E | |||
}} | }} |
Latest revision as of 07:52, 20 September 2015
Short description: | p9@CSNK1E |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_CSNK1E_5end |
Coexpression cluster: | NA |
Association with transcript: | -67bp_to_ENST00000402865_5end |
EntrezGene: | CSNK1E |
HGNC: | 2453 |
UniProt: | P49674 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 1.21e-16 | 132 |
ectoderm-derived structure | 2.61e-14 | 171 |
ectoderm | 2.61e-14 | 171 |
presumptive ectoderm | 2.61e-14 | 171 |
ecto-epithelium | 1.26e-13 | 104 |
neural plate | 1.53e-11 | 82 |
presumptive neural plate | 1.53e-11 | 82 |
neurectoderm | 3.50e-11 | 86 |
adult organism | 4.84e-11 | 114 |
pre-chordal neural plate | 1.15e-09 | 61 |
regional part of nervous system | 6.83e-09 | 53 |
regional part of brain | 6.83e-09 | 53 |
neural tube | 7.63e-09 | 56 |
neural rod | 7.63e-09 | 56 |
future spinal cord | 7.63e-09 | 56 |
neural keel | 7.63e-09 | 56 |
central nervous system | 1.87e-08 | 81 |
regional part of forebrain | 2.45e-08 | 41 |
forebrain | 2.45e-08 | 41 |
anterior neural tube | 2.45e-08 | 41 |
future forebrain | 2.45e-08 | 41 |
brain grey matter | 4.42e-08 | 34 |
gray matter | 4.42e-08 | 34 |
telencephalon | 5.30e-08 | 34 |
regional part of telencephalon | 5.82e-08 | 32 |
nervous system | 9.95e-08 | 89 |
embryo | 1.83e-07 | 592 |
epithelium | 3.40e-07 | 306 |
cerebral hemisphere | 5.68e-07 | 32 |
cell layer | 6.41e-07 | 309 |
developing anatomical structure | 6.54e-07 | 581 |
cerebral cortex | 9.39e-07 | 25 |
pallium | 9.39e-07 | 25 |