FFCP PHASE1:Hg19::chr22:38577731..38577766,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr22:38577731..38577766,- to FFCP PHASE1:Hg19::chr22:38577731..38577766,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8398 | |EntrezGene=8398 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9039 | |HGNC=9039 | ||
|TSSclassifier=strong | |||
|UniProt=E7EQB7,F8W6N7,O60733 | |UniProt=E7EQB7,F8W6N7,O60733 | ||
|association_with_transcript=0bp_to_ENST00000335538,ENST00000335539,ENST00000396860,NM_001004426,NM_003560,uc003auy.1,uc003auz.1,uc003ava.1,uc010gxk.1_5end | |||
|cluster_id=chr22:38577731..38577766,- | |||
|description=CAGE_peak_2_at_PLA2G6_5end | |||
|id=chr22:38577731..38577766,- | |||
|ontology_enrichment_celltype=CL:0002057!1.07e-10!42;CL:0000860!1.43e-10!45;CL:0000766!1.95e-07!76;CL:0000763!3.30e-07!112;CL:0000049!3.30e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.85e-12;33!CL:0002057;2.85e-12;33!CL:0000473;2.06e-07;39!CL:0000234;2.06e-07;39!CL:0000576;6.71e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.55e-12,42;CL:0002057,1.55e-12,42;CL:0000473,2.60e-09,48;CL:0000234,2.60e-09,48;CL:0000766,3.40e-09,72;CL:0000557,4.57e-07,67;CL:0000839,8.87e-07,66;CL:0000763,9.55e-07,108;CL:0000049,9.55e-07,108 | |||
|ontology_enrichment_development_v019=CL:0002057;3.06e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!8.26e-22!57;UBERON:0005068!8.26e-22!57;UBERON:0006241!8.26e-22!57;UBERON:0007135!8.26e-22!57;UBERON:0005743!3.97e-19!86;UBERON:0001017!7.26e-19!82;UBERON:0000955!1.64e-18!69;UBERON:0006238!1.64e-18!69;UBERON:0002616!5.75e-18!59;UBERON:0000073!7.55e-17!94;UBERON:0001016!7.55e-17!94;UBERON:0003075!1.62e-16!86;UBERON:0007284!1.62e-16!86;UBERON:0007023!5.95e-16!115;UBERON:0002346!2.54e-15!90;UBERON:0003080!1.27e-14!42;UBERON:0002780!3.00e-14!41;UBERON:0001890!3.00e-14!41;UBERON:0006240!3.00e-14!41;UBERON:0003056!9.33e-13!61;UBERON:0001893!6.80e-11!34;UBERON:0002020!7.93e-11!34;UBERON:0003528!7.93e-11!34;UBERON:0002791!1.89e-10!33;UBERON:0001869!7.22e-10!32;UBERON:0002390!6.28e-09!102;UBERON:0003061!6.28e-09!102;UBERON:0003076!1.27e-08!15;UBERON:0003057!1.27e-08!15;UBERON:0000153!9.92e-08!129;UBERON:0007811!9.92e-08!129;UBERON:0002619!2.32e-07!22;UBERON:0004733!2.81e-07!12;UBERON:0002028!2.81e-07!12;UBERON:0007277!2.81e-07!12;UBERON:0000033!3.03e-07!123;UBERON:0002193!3.22e-07!112;UBERON:0000956!3.25e-07!25;UBERON:0000203!3.25e-07!25;UBERON:0001950!4.78e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;3.16e-13;53!UBERON:0002616;3.16e-13;53!UBERON:0002780;4.20e-11;41!UBERON:0001890;4.20e-11;41!UBERON:0001893;6.96e-10;34!UBERON:0003528;2.28e-09;34!UBERON:0002020;2.28e-09;34!UBERON:0002791;3.99e-09;32!UBERON:0001869;4.94e-09;32!UBERON:0004733;1.48e-08;12!UBERON:0002028;1.48e-08;12!UBERON:0000955;1.69e-08;68!UBERON:0001017;7.03e-08;75!UBERON:0004732;1.63e-07;13!UBERON:0001950;3.29e-07;20!UBERON:0002619;3.42e-07;22!UBERON:0000956;7.88e-07;25!UBERON:0000203;7.88e-07;25!UBERON:0001016;9.23e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,5.75e-24,56;UBERON:0005068,5.75e-24,56;UBERON:0006241,5.75e-24,56;UBERON:0007135,5.75e-24,56;UBERON:0000073,3.05e-22,53;UBERON:0002616,3.05e-22,53;UBERON:0001017,2.23e-19,81;UBERON:0000955,1.67e-18,68;UBERON:0006238,1.67e-18,68;UBERON:0003075,5.99e-18,82;UBERON:0007284,5.99e-18,82;UBERON:0001016,5.30e-17,89;UBERON:0002346,5.41e-16,86;UBERON:0007023,2.18e-15,114;UBERON:0002780,3.33e-15,41;UBERON:0001890,3.33e-15,41;UBERON:0003080,3.33e-15,41;UBERON:0006240,3.33e-15,41;UBERON:0010371,2.48e-13,104;UBERON:0003056,9.60e-13,61;UBERON:0001893,3.61e-11,34;UBERON:0003528,4.30e-11,34;UBERON:0002020,4.30e-11,34;UBERON:0003076,2.21e-10,15;UBERON:0003057,2.21e-10,15;UBERON:0002791,5.89e-10,32;UBERON:0001869,5.92e-10,32;UBERON:0002390,2.14e-09,98;UBERON:0003061,2.14e-09,98;UBERON:0004733,1.05e-08,12;UBERON:0002028,1.05e-08,12;UBERON:0007277,1.05e-08,12;UBERON:0004732,1.19e-07,13;UBERON:0002193,1.21e-07,108;UBERON:0001950,4.45e-07,20;UBERON:0002619,4.63e-07,22;UBERON:0010314,4.78e-07,132;UBERON:0000956,8.18e-07,25;UBERON:0000203,8.18e-07,25 | |||
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| ||
|short_description=p2@PLA2G6 | |||
}} | }} |
Latest revision as of 07:30, 20 September 2015
Short description: | p2@PLA2G6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PLA2G6_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000335538, ENST00000335539, ENST00000396860, NM_001004426, NM_003560, uc003auy.1, uc003auz.1, uc003ava.1, uc010gxk.1_5end |
EntrezGene: | PLA2G6 |
HGNC: | 9039 |
UniProt: | E7EQB7F8W6N7O60733 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.55e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.55e-12 | 42 |
defensive cell | 2.60e-09 | 48 |
phagocyte | 2.60e-09 | 48 |
myeloid leukocyte | 3.40e-09 | 72 |
granulocyte monocyte progenitor cell | 4.57e-07 | 67 |
myeloid lineage restricted progenitor cell | 8.87e-07 | 66 |
myeloid cell | 9.55e-07 | 108 |
common myeloid progenitor | 9.55e-07 | 108 |