FFCP PHASE1:Hg19::chr22:19166241..19166257,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr22:19166241..19166257,- to FFCP PHASE1:Hg19::chr22:19166241..19166257,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6576 | |EntrezGene=6576 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10979 | |HGNC=10979 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000470922_5end | |||
|cluster_id=chr22:19166241..19166257,- | |||
|coexpression_cluster_id=C4087 | |||
|description=CAGE_peak_1_at_SLC25A1_5end | |||
|id=chr22:19166241..19166257,- | |||
|ontology_enrichment_celltype=CL:0002321!3.53e-27!248;CL:0000220!7.79e-27!246;CL:0000066!3.32e-21!254;CL:0000548!9.32e-21!679;CL:0000004!9.32e-21!679;CL:0000255!9.32e-21!679;CL:0000012!1.78e-19!682;CL:0000055!6.65e-18!180;CL:0000183!2.10e-16!59;CL:0000222!5.61e-16!119;CL:0000144!2.33e-15!625;CL:0000680!3.14e-14!57;CL:0000056!3.14e-14!57;CL:0000355!3.14e-14!57;CL:0000187!3.74e-14!54;CL:0002371!3.86e-14!591;CL:0000192!1.78e-13!42;CL:0000514!1.78e-13!42;CL:0000393!2.43e-13!60;CL:0000211!2.43e-13!60;CL:0000325!9.98e-12!39;CL:0000003!1.29e-09!722;CL:0000359!1.38e-09!32;CL:1000449!7.73e-08!16;CL:0000136!8.84e-08!15;CL:0002077!3.19e-07!33;CL:1000497!6.10e-07!18;CL:0002518!6.10e-07!18;CL:0000057!7.42e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0000192;7.17e-10;43!CL:0000359;3.78e-09;32!CL:0000187;7.60e-09;55!CL:0000136;9.29e-08;13!CL:1000449;1.40e-07;15!CL:0000393;3.10e-07;61!CL:0000211;3.10e-07;61!CL:0002077;4.18e-07;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,7.82e-28,250;CL:0000066,6.50e-21,253;CL:0000222,1.51e-16,121;CL:0000680,1.58e-14,58;CL:0000056,1.58e-14,58;CL:0000355,1.58e-14,58;CL:0000187,1.87e-14,55;CL:0000192,8.97e-14,43;CL:0000514,8.97e-14,43;CL:0000393,1.23e-13,61;CL:0000211,1.23e-13,61;CL:0000359,1.38e-09,32;CL:0000136,8.83e-08,15;CL:0002077,9.49e-08,34;CL:1000449,1.46e-07,15;CL:0000057,5.96e-07,76 | |||
|ontology_enrichment_development_v019=CL:0000514;7.17e-10;43!CL:0000355;5.56e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!1.52e-24!143;UBERON:0002100!4.51e-24!216;UBERON:0003104!9.66e-21!238;UBERON:0009142!9.66e-21!238;UBERON:0000481!1.48e-19!347;UBERON:0003914!9.08e-18!118;UBERON:0000475!1.09e-16!365;UBERON:0000119!4.02e-16!312;UBERON:0000914!4.03e-16!83;UBERON:0002329!4.03e-16!83;UBERON:0003077!4.03e-16!83;UBERON:0003059!4.03e-16!83;UBERON:0007282!4.03e-16!83;UBERON:0009618!4.03e-16!83;UBERON:0007285!4.03e-16!83;UBERON:0000490!6.08e-16!138;UBERON:0000483!9.46e-16!309;UBERON:0000486!1.76e-15!82;UBERON:0004290!1.23e-14!70;UBERON:0002049!2.38e-12!79;UBERON:0007798!2.38e-12!79;UBERON:0009569!1.91e-11!113;UBERON:0001134!2.13e-11!61;UBERON:0002036!2.13e-11!61;UBERON:0003082!2.13e-11!61;UBERON:0002385!2.50e-11!63;UBERON:0001015!2.50e-11!63;UBERON:0000383!2.50e-11!63;UBERON:0000477!5.43e-11!286;UBERON:0004119!1.73e-09!169;UBERON:0000925!1.73e-09!169;UBERON:0006595!1.73e-09!169;UBERON:0004872!2.94e-09!84;UBERON:0001048!3.04e-09!168;UBERON:0002417!4.28e-09!61;UBERON:0000916!4.28e-09!61;UBERON:0001981!2.01e-08!60;UBERON:0007500!2.01e-08!60;UBERON:0004537!2.01e-08!60;UBERON:0006965!2.01e-08!60;UBERON:0000055!2.78e-08!69;UBERON:0000468!3.02e-08!659;UBERON:0005172!5.52e-08!55;UBERON:0005173!5.52e-08!55;UBERON:0004211!7.73e-08!16;UBERON:0001285!7.73e-08!16;UBERON:0007684!7.73e-08!16;UBERON:0003220!7.73e-08!16;UBERON:0004208!7.73e-08!16;UBERON:0005085!1.58e-07!29;UBERON:0001007!1.58e-07!155;UBERON:0001555!1.58e-07!155;UBERON:0007026!1.58e-07!155;UBERON:0001637!2.09e-07!42;UBERON:0003509!2.09e-07!42;UBERON:0004572!2.09e-07!42;UBERON:0006554!2.19e-07!44;UBERON:0005177!2.37e-07!107;UBERON:0000922!2.91e-07!612;UBERON:0006555!3.39e-07!17;UBERON:0005103!3.39e-07!17;UBERON:0000083!3.39e-07!17;UBERON:0009201!3.39e-07!17;UBERON:0004819!3.39e-07!17;UBERON:0006553!3.39e-07!17;UBERON:0003074!3.39e-07!17;UBERON:0003060!3.39e-07!17;UBERON:0000466!3.40e-07!126;UBERON:0001008!3.74e-07!45;UBERON:0004111!4.28e-07!241;UBERON:0000923!4.89e-07!604;UBERON:0005291!4.89e-07!604;UBERON:0006598!4.89e-07!604;UBERON:0002532!4.89e-07!604;UBERON:0001737!5.80e-07!9;UBERON:0002050!6.47e-07!605;UBERON:0005423!6.47e-07!605 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;1.40e-07;15!UBERON:0004819;1.40e-07;15!UBERON:0001285;1.40e-07;15!UBERON:0007684;1.40e-07;15!UBERON:0006554;2.76e-07;30!UBERON:0001008;2.76e-07;30!UBERON:0001737;5.70e-07;9!UBERON:0001557;5.70e-07;9!UBERON:0003914;9.45e-07;74 | |||
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| ||
|short_description=p1@SLC25A1 | |||
}} | }} |
Latest revision as of 02:49, 19 September 2015
Short description: | p1@SLC25A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC25A1_5end |
Coexpression cluster: | C4087_Mesenchymal_Adipocyte_Alveolar_Hair_Renal_Fibroblast_Pericytes |
Association with transcript: | 0bp_to_ENST00000470922_5end |
EntrezGene: | SLC25A1 |
HGNC: | 10979 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 7.82e-28 | 250 |
epithelial cell | 6.50e-21 | 253 |
mesodermal cell | 1.51e-16 | 121 |
muscle precursor cell | 1.58e-14 | 58 |
myoblast | 1.58e-14 | 58 |
multi-potent skeletal muscle stem cell | 1.58e-14 | 58 |
muscle cell | 1.87e-14 | 55 |
smooth muscle cell | 8.97e-14 | 43 |
smooth muscle myoblast | 8.97e-14 | 43 |
electrically responsive cell | 1.23e-13 | 61 |
electrically active cell | 1.23e-13 | 61 |
vascular associated smooth muscle cell | 1.38e-09 | 32 |
fat cell | 8.83e-08 | 15 |
ecto-epithelial cell | 9.49e-08 | 34 |
epithelial cell of nephron | 1.46e-07 | 15 |
fibroblast | 5.96e-07 | 76 |