FFCP PHASE1:Hg19::chr21:45681768..45681773,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=29947 | |EntrezGene=29947 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2980 | |HGNC=2980 | ||
|TSSclassifier=strong | |||
|UniProt=C9J0T5 | |UniProt=C9J0T5 | ||
|association_with_transcript=-3bp_to_ENST00000431166_5end | |||
|cluster_id=chr21:45681768..45681773,- | |||
|coexpression_cluster_id=C45 | |||
|description=CAGE_peak_4_at_DNMT3L_5end | |||
|id=chr21:45681768..45681773,- | |||
|ontology_enrichment_celltype=CL:0000039!1.70e-112!7;CL:0000586!1.70e-112!7;CL:0000083!7.70e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000039;7.99e-144;7!CL:0000586;7.99e-144;7!CL:0000083;2.18e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,9.03e-144,7;CL:0000586,9.03e-144,7;CL:0000083,2.11e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.67e-45;10!UBERON:0005564;1.67e-45;10 | |||
|ontology_enrichment_disease=DOID:3095!1.05e-48!22;DOID:2994!1.05e-48!22;DOID:1799!2.10e-23!1;DOID:10165!2.10e-23!1;DOID:1798!2.10e-23!1;DOID:0050687!1.12e-09!143;DOID:305!1.73e-07!106;DOID:1793!7.70e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:3095;3.24e-46;22!DOID:2994;3.24e-46;22!DOID:1799;2.05e-29;1!DOID:10165;2.05e-29;1!DOID:1798;2.05e-29;1!DOID:1793;2.18e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,3.37e-46,22;DOID:2994,3.37e-46,22;DOID:1799,1.78e-29,1;DOID:10165,1.78e-29,1;DOID:1798,1.78e-29,1;DOID:0050687,6.71e-10,143;DOID:1793,2.11e-08,4;DOID:305,5.42e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0000473!2.03e-44!8;UBERON:0003135!1.75e-32!11;UBERON:0000991!2.81e-17!21;UBERON:0009196!2.81e-17!21;UBERON:0009117!2.81e-17!21;UBERON:0005564!2.81e-17!21;UBERON:0004176!1.63e-16!22;UBERON:0003101!1.63e-16!22;UBERON:0000079!1.63e-16!22;UBERON:0002323!3.15e-12!46;UBERON:0004458!1.72e-11!49;UBERON:0003886!5.70e-09!63;UBERON:0002553!4.39e-08!70;UBERON:0003133!8.88e-08!48 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.14e-56;8!UBERON:0003135;1.93e-41;11!UBERON:0000991;4.78e-22;21!UBERON:0003101;4.49e-21;22!UBERON:0000079;4.49e-21;22!UBERON:0002323;1.29e-14;45!UBERON:0002553;1.98e-09;52!UBERON:0004458;3.88e-09;48!UBERON:0003133;2.98e-08;44!UBERON:0000922;5.64e-08;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.22e-56,8;UBERON:0003135,2.04e-41,11;UBERON:0000991,4.92e-22,21;UBERON:0009196,4.92e-22,21;UBERON:0009117,4.92e-22,21;UBERON:0005564,4.92e-22,21;UBERON:0004176,4.61e-21,22;UBERON:0003101,4.61e-21,22;UBERON:0000079,4.61e-21,22;UBERON:0002323,9.93e-16,46;UBERON:0004458,8.61e-15,49;UBERON:0003886,1.86e-13,54;UBERON:0002553,5.93e-12,61;UBERON:0003133,6.02e-10,48;UBERON:0005156,3.56e-08,59;UBERON:0000990,3.56e-08,59 | |||
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|short_description=p4@DNMT3L | |||
}} | }} |
Latest revision as of 18:30, 18 September 2015
Short description: | p4@DNMT3L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_DNMT3L_5end |
Coexpression cluster: | C45_testicular_choriocarcinoma_H9_teratocarcinoma_Wilms_pancreatic_iPS |
Association with transcript: | -3bp_to_ENST00000431166_5end |
EntrezGene: | DNMT3L |
HGNC: | 2980 |
UniProt: | C9J0T5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 9.03e-144 | 7 |
germ cell | 9.03e-144 | 7 |
epithelial cell of pancreas | 2.11e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
testis | 1.22e-56 | 8 |
male reproductive organ | 2.04e-41 | 11 |
gonad | 4.92e-22 | 21 |
indifferent external genitalia | 4.92e-22 | 21 |
indifferent gonad | 4.92e-22 | 21 |
gonad primordium | 4.92e-22 | 21 |
external genitalia | 4.61e-21 | 22 |
male organism | 4.61e-21 | 22 |
male reproductive system | 4.61e-21 | 22 |
body cavity | 9.93e-16 | 46 |
body cavity or lining | 8.61e-15 | 49 |
body cavity precursor | 1.86e-13 | 54 |
anatomical cavity | 5.93e-12 | 61 |
reproductive organ | 6.02e-10 | 48 |
reproductive structure | 3.56e-08 | 59 |
reproductive system | 3.56e-08 | 59 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 3.37e-46 | 22 |
germ cell cancer | 3.37e-46 | 22 |
islet cell tumor | 1.78e-29 | 1 |
endocrine pancreas cancer | 1.78e-29 | 1 |
pancreatic endocrine carcinoma | 1.78e-29 | 1 |
cell type cancer | 6.71e-10 | 143 |
pancreatic cancer | 2.11e-08 | 4 |
carcinoma | 5.42e-07 | 106 |