FFCP PHASE1:Hg19::chr21:42601985..42602001,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=25825 | |EntrezGene=25825 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=934 | |HGNC=934 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-43bp_to_ENST00000466122_5end | |||
|cluster_id=chr21:42601985..42602001,+ | |||
|coexpression_cluster_id=C99 | |||
|description=CAGE_peak_6_at_BACE2_5end | |||
|id=chr21:42601985..42602001,+ | |||
|ontology_enrichment_celltype=CL:0000945!5.38e-65!24;CL:0000826!5.38e-65!24;CL:0000236!7.47e-45!14;CL:0000542!3.21e-32!53;CL:0000051!3.21e-32!53;CL:0000838!5.38e-30!52;CL:0002087!5.27e-16!119;CL:0000738!8.39e-14!140;CL:0000842!3.71e-11!3;CL:0002031!2.76e-10!124;CL:0000037!5.28e-10!172;CL:0000566!5.28e-10!172;CL:0000988!5.62e-10!182;CL:0000080!1.47e-09!6;CL:0000224!1.77e-08!4;CL:0000785!1.87e-08!2;CL:0000955!1.87e-08!2;CL:0000818!1.87e-08!2;CL:0000954!1.87e-08!2;CL:0000816!1.87e-08!2;CL:0002032!5.26e-08!165;CL:0000837!5.26e-08!165 | |||
|ontology_enrichment_celltype_v019=CL:0000236;1.16e-81;13!CL:0000945;6.76e-68;24!CL:0000542;2.48e-25;53!CL:0000785;1.42e-08;1!CL:0000819;1.42e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,1.20e-75,14;CL:0000945,6.76e-68,24;CL:0000826,6.76e-68,24;CL:0000838,3.00e-34,52;CL:0000542,1.51e-33,53;CL:0000051,1.51e-33,53;CL:0002087,1.11e-13,115;CL:0002031,5.43e-13,120;CL:0000738,4.06e-11,136;CL:0002032,6.22e-09,161;CL:0000837,6.22e-09,161;CL:0000819,1.42e-08,1;CL:0000037,1.95e-08,168;CL:0000988,7.39e-08,177 | |||
|ontology_enrichment_development_v019=CL:0000051;2.48e-25;53!UBERON:0004872;6.31e-10;7 | |||
|ontology_enrichment_disease=DOID:0060058!1.70e-12!10 | |||
|ontology_enrichment_disease_v019=DOID:0060073;1.42e-08;1!DOID:8675;1.42e-08;1!DOID:0060058;3.84e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,1.42e-08,1;DOID:8675,1.42e-08,1;DOID:0060058,3.72e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0000178!2.08e-32!15;UBERON:0000179!2.08e-32!15;UBERON:0000463!2.08e-32!15;UBERON:0002106!1.26e-11!3;UBERON:0004854!1.26e-11!3;UBERON:0009034!1.26e-11!3;UBERON:0002095!1.26e-11!3;UBERON:0004782!1.26e-11!3;UBERON:0003281!1.26e-11!3;UBERON:0009664!1.26e-11!3;UBERON:0002296!1.26e-11!3;UBERON:0005602!1.26e-11!3;UBERON:0001179!1.26e-11!3;UBERON:0006293!1.26e-11!3;UBERON:0007023!1.13e-10!115;UBERON:0004177!2.54e-08!7;UBERON:0002193!5.16e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;9.10e-17;15!UBERON:0000179;9.10e-17;15!UBERON:0000463;9.10e-17;15!UBERON:0002390;2.51e-12;32!UBERON:0002106;1.26e-10;3!UBERON:0002193;4.33e-10;42!UBERON:0000029;8.69e-09;1!UBERON:0002372;1.78e-08;1!UBERON:0001961;1.78e-08;1!UBERON:0001744;1.78e-08;1!UBERON:0001042;1.78e-08;1!UBERON:0001735;1.78e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,9.77e-17,15;UBERON:0000179,9.77e-17,15;UBERON:0000463,9.77e-17,15;UBERON:0002106,1.26e-10,3;UBERON:0004854,1.26e-10,3;UBERON:0009034,1.26e-10,3;UBERON:0002095,1.26e-10,3;UBERON:0004782,1.26e-10,3;UBERON:0003281,1.26e-10,3;UBERON:0009664,1.26e-10,3;UBERON:0002296,1.26e-10,3;UBERON:0005602,1.26e-10,3;UBERON:0001179,1.26e-10,3;UBERON:0006293,1.26e-10,3;UBERON:0000029,7.75e-09,1;UBERON:0002372,1.65e-08,1;UBERON:0001961,1.65e-08,1;UBERON:0001744,1.65e-08,1;UBERON:0001735,1.65e-08,1 | |||
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| ||
|short_description=p6@BACE2 | |||
}} | }} |
Latest revision as of 12:38, 18 September 2015
Short description: | p6@BACE2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_BACE2_5end |
Coexpression cluster: | C99_hairy_mycosis_submaxillary_salivary_cord_kidney_parotid |
Association with transcript: | -43bp_to_ENST00000466122_5end |
EntrezGene: | BACE2 |
HGNC: | 934 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 1.20e-75 | 14 |
lymphocyte of B lineage | 6.76e-68 | 24 |
pro-B cell | 6.76e-68 | 24 |
lymphoid lineage restricted progenitor cell | 3.00e-34 | 52 |
lymphocyte | 1.51e-33 | 53 |
common lymphoid progenitor | 1.51e-33 | 53 |
nongranular leukocyte | 1.11e-13 | 115 |
hematopoietic lineage restricted progenitor cell | 5.43e-13 | 120 |
leukocyte | 4.06e-11 | 136 |
hematopoietic oligopotent progenitor cell | 6.22e-09 | 161 |
hematopoietic multipotent progenitor cell | 6.22e-09 | 161 |
B-1 B cell | 1.42e-08 | 1 |
hematopoietic stem cell | 1.95e-08 | 168 |
hematopoietic cell | 7.39e-08 | 177 |
Ontology term | p-value | n |
---|---|---|
blood | 9.77e-17 | 15 |
haemolymphatic fluid | 9.77e-17 | 15 |
organism substance | 9.77e-17 | 15 |
spleen | 1.26e-10 | 3 |
gastrointestinal system mesentery | 1.26e-10 | 3 |
stomach region | 1.26e-10 | 3 |
mesentery | 1.26e-10 | 3 |
gastrointestinal system serosa | 1.26e-10 | 3 |
mesentery of stomach | 1.26e-10 | 3 |
gut mesentery | 1.26e-10 | 3 |
dorsal mesentery | 1.26e-10 | 3 |
dorsal mesogastrium | 1.26e-10 | 3 |
peritoneal cavity | 1.26e-10 | 3 |
spleen primordium | 1.26e-10 | 3 |
lymph node | 7.75e-09 | 1 |
tonsil | 1.65e-08 | 1 |
mucosa-associated lymphoid tissue | 1.65e-08 | 1 |
lymphoid tissue | 1.65e-08 | 1 |
tonsillar ring | 1.65e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 1.42e-08 | 1 |
lymphosarcoma | 1.42e-08 | 1 |
lymphoma | 3.72e-07 | 10 |