FFCP PHASE1:Hg19::chr21:40032884..40032915,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr21:40032884..40032915,- to FFCP PHASE1:Hg19::chr21:40032884..40032915,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2078 | |EntrezGene=2078 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3446 | |HGNC=3446 | ||
|TSSclassifier=strong | |||
|UniProt=P11308,B4DVX5 | |UniProt=P11308,B4DVX5 | ||
|association_with_transcript=-293bp_to_ENST00000398919,NM_001243428,uc010gnw.2,uc010gnx.2_5end | |||
|cluster_id=chr21:40032884..40032915,- | |||
|description=CAGE_peak_2_at_ERG_5end | |||
|id=chr21:40032884..40032915,- | |||
|ontology_enrichment_celltype=CL:0000153!6.71e-08!9;CL:0000447!6.71e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0000153;2.14e-16;9!CL:0000447;2.14e-16;9!CL:0000138;3.90e-13;6!CL:0000499;1.19e-10;28!CL:0000327;2.47e-09;15!CL:0000135;7.29e-09;3!CL:0000388;7.29e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,2.13e-16,9;CL:0000447,2.13e-16,9;CL:0000058,3.91e-13,6;CL:0000138,3.91e-13,6;CL:0000499,1.06e-10,28;CL:0000327,2.46e-09,15;CL:0000135,6.49e-09,3;CL:0000388,6.49e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0006965;7.80e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.82e-16!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;7.29e-09;3!UBERON:0000043;7.29e-09;3!UBERON:0007845;7.29e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,6.49e-09,3;UBERON:0000043,6.49e-09,3;UBERON:0007845,6.49e-09,3 | |||
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| ||
|short_description=p2@ERG | |||
}} | }} |
Latest revision as of 10:32, 18 September 2015
Short description: | p2@ERG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ERG_5end |
Coexpression cluster: | NA |
Association with transcript: | -293bp_to_ENST00000398919, NM_001243428, uc010gnw.2, uc010gnx.2_5end |
EntrezGene: | ERG |
HGNC: | 3446 |
UniProt: | P11308B4DVX5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 2.13e-16 | 9 |
carbohydrate secreting cell | 2.13e-16 | 9 |
chondroblast | 3.91e-13 | 6 |
chondrocyte | 3.91e-13 | 6 |
stromal cell | 1.06e-10 | 28 |
extracellular matrix secreting cell | 2.46e-09 | 15 |
fibrocyte | 6.49e-09 | 3 |
tendon cell | 6.49e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 6.49e-09 | 3 |
tendon | 6.49e-09 | 3 |
regular connective tissue | 6.49e-09 | 3 |