FFCP PHASE1:Hg19::chr21:36260325..36260341,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr21:36260325..36260341,- to FFCP PHASE1:Hg19::chr21:36260325..36260341,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=861 | |EntrezGene=861 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=10471 | |HGNC=10471 | ||
|TSSclassifier=strong | |||
|UniProt=Q01196 | |UniProt=Q01196 | ||
|association_with_transcript=-148bp_to_D10570_5end | |||
|cluster_id=chr21:36260325..36260341,- | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_14_at_RUNX1_5end | |||
|id=chr21:36260325..36260341,- | |||
|ontology_enrichment_celltype=CL:0002057!1.60e-22!42;CL:0000860!1.37e-19!45;CL:0002194!3.47e-19!63;CL:0000576!3.47e-19!63;CL:0000040!3.47e-19!63;CL:0000559!3.47e-19!63;CL:0002009!7.54e-18!65;CL:0000766!9.67e-17!76;CL:0000839!1.03e-16!70;CL:0000557!3.87e-16!71;CL:0000012!6.15e-14!682;CL:0002371!1.64e-13!591;CL:0000548!3.15e-13!679;CL:0000004!3.15e-13!679;CL:0000255!3.15e-13!679;CL:0000144!3.78e-13!625;CL:0000763!1.71e-10!112;CL:0000049!1.71e-10!112;CL:0000063!3.06e-10!578;CL:0000723!3.67e-10!436;CL:0000134!6.00e-10!358;CL:0000034!8.86e-10!444;CL:0002320!1.01e-09!365;CL:0000048!1.13e-09!430;CL:0000219!7.53e-08!390;CL:0000003!1.67e-07!722 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.30e-53;33!CL:0002057;1.30e-53;33!CL:0000473;1.83e-38;39!CL:0000234;1.83e-38;39!CL:0000576;1.47e-28;48!CL:0000766;8.97e-20;69!CL:0000763;4.77e-09;100!CL:0000569;1.92e-07;4!CL:0000767;4.64e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.40e-53,42;CL:0002057,2.40e-53,42;CL:0000473,4.16e-48,48;CL:0000234,4.16e-48,48;CL:0002194,3.27e-38,59;CL:0000576,3.27e-38,59;CL:0000040,3.27e-38,59;CL:0000559,3.27e-38,59;CL:0000766,1.46e-37,72;CL:0002009,1.35e-36,61;CL:0000839,3.31e-35,66;CL:0000557,1.64e-34,67;CL:0000763,1.83e-23,108;CL:0000049,1.83e-23,108;CL:0000034,2.07e-18,441;CL:0000723,1.16e-17,433;CL:0000048,1.58e-17,427;CL:0000134,1.37e-16,354;CL:0002320,7.13e-16,361;CL:0002031,2.15e-14,120;CL:0002087,2.32e-14,115;CL:0000738,2.77e-14,136;CL:0000219,2.29e-13,386;CL:0002032,8.27e-12,161;CL:0000837,8.27e-12,161;CL:0000037,7.51e-11,168;CL:0000988,9.63e-10,177;CL:0000569,9.43e-08,4;CL:0000011,9.43e-08,4;CL:0000767,4.50e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;6.73e-40;42!CL:0000049;9.58e-08;108!CL:0000011;1.92e-07;4 | |||
|ontology_enrichment_disease=DOID:2394!9.93e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.81e-11;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.01e-11,14 | |||
|ontology_enrichment_uberon=UBERON:0002371!4.18e-16!80;UBERON:0004765!1.62e-15!101;UBERON:0001434!1.62e-15!101;UBERON:0001474!5.36e-15!86;UBERON:0002204!7.78e-14!167;UBERON:0002390!4.62e-13!102;UBERON:0003061!4.62e-13!102;UBERON:0002193!5.80e-11!112;UBERON:0002405!3.04e-09!115;UBERON:0002384!5.96e-09!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.10e-33,76;UBERON:0001474,2.54e-31,82;UBERON:0004765,4.36e-29,90;UBERON:0001434,6.15e-25,100;UBERON:0002405,1.21e-24,93;UBERON:0002390,8.67e-23,98;UBERON:0003061,8.67e-23,98;UBERON:0002204,8.73e-20,167;UBERON:0002193,1.32e-19,108;UBERON:0003081,5.04e-17,203;UBERON:0002384,1.55e-15,371;UBERON:0000926,4.30e-11,315;UBERON:0004120,4.30e-11,315;UBERON:0006603,4.30e-11,315 | |||
|phase1_expression=0.181678379270557,0,0.563817616383885,0,0,0,0,0,0,0.491467873003018,0,0.218441372130172,0.263766978228454,0.495065411840187,0,0,0.602694528023977,0,0,0.246242116153576,0.204000691244253,0,0,0.273748850145768,0,0,0,0,3.93364276848904,2.68680578668049,4.18003532953405,0,0,0.739508020333575,0,0,0.293600439334847,2.21598163412751,4.61252229181326,2.82114131930607,0.447830948479849,0,0.257575567634187,5.23433659606433,4.1566353805769,3.15359279544161,5.11343881192506,2.87817521615278,6.81354015969228,20.1384674625505,21.0051779353863,14.8983804829809,6.55016793399575,5.16387746867061,6.77132432971709,5.83551252582075,5.45812300115692,3.82029923556644,6.73384563215986,5.77672248736969,8.31138263538754,10.2253903057882,15.3587016368657,8.52449501065388,8.70627715885752,3.97169657283798,6.22822248995575,18.3411525637423,11.9941071236646,19.3298071787554,6.65939452896706,5.15588690382591,4.43047342417238,0,0.425208599930087,0.209658645508376,1.46027220490444,0.450530678524519,0.964353520182481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64342657158052,1.12101712596307,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,1.00267582127178,1.01392563272577,3.9764297352555,1.45990461090791,0.283604451492204,0,0.087834785693126,0.0654895377488563,0,0,0,0,0.797747763113191,0.476981248610684,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0.436094052142534,0,0.25326102332916,3.83986624358335,1.43418310374407,0,0.560677600142307,1.06748995729705,0,0,0,0,0.151357427644931,0,0,0,0,0.298897361103602,0.117434498643765,0,0.140450806702248,0,0,0,0,0,0,0.718618141816238,0,0.125118519871964,0.554128230968366,0.877955241761676,0.612975591598039,0,0.113432183160021,0.89694817844431,0.427114777637135,0.423863802319124,1.20036438433761,0.92747276314595,0.257640540045629,0,1.35021065793013,0.779496041289589,1.51460264546469,1.65689817556139,0,0.355009592516614,0.604512589365842,0.339121184620975,0.57978255948989,0.272746120590835,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0.110293972732394,0.217879444092406,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0.439001141634502,1.1240175325762,0.402115889646523,0.555530670951178,0.325808305310325,0,0,0.231860809950154,0.117408694235822,0,0,0.190254152234598,0,0,0.984868024349589,0.234004265139238,0.297262324577456,1.87467667973554,0.503946384596579,0.708875486211932,0.806026704325635,0.290633938513962,0,5.41929561685538,0.264145302039678,0,0,0,0,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0.1466765716419,1.68053230485111,0,0,0,0,0,0,0.266422179016099,0.428933980974443,0,0.823240336780769,0.325736184293735,0.355391948742546,0,0,0.871533458600294,0.499864955910285,0,0,2.10833939483032,0,0,1.42636905040718,1.59259437334337,0.821905290201534,0.716243852959582,0.336255431980582,0.591092280605782,0.431255149719035,0.128343036279748,0.254094624222463,0,0,0,0,0,0,0,0.36807447515742,0,0.271265023699736,0.415941723061614,0.892144943985809,0.473107245101804,0.35142424497814,0.300946099727719,0,0,0,0.553107505625109,0.695068915744663,0,0,0.82707210449155,0.431428401637234,0.533637789017222,0,0,0,0.248107807818777,0.767309866440312,0.280660094433074,0.512556597022804,0,0.321707842287215,0,0.462629081407967,0.532685175939381,1.06765302817952,0.519254429183621,0.697262270759755,0.241718899183244,1.40354529212299,0.368323955743585,0.229628896329213,0.182091168006717,0.393373244878272,0,1.15523005656622,0,0,1.37217117560738,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0.256450125116389,0.328014645699706,0.325378394664303,0.103041011647722,0,0,1.14853107599234,0.650060246036521,1.6068392984416,0.580024309752732,0,0,0,0.214840489736547,0.145016693914229,0,1.06838442776085,0.826424576804891,1.15314040419064,1.78657797492418,0.50578890427775,1.39453664789186,5.03699754929024,0.6970372701606,0.308033580176089,0,1.73986598415015,1.11194531462352,0.286249773483982,0,0,0.190630193923825,0,0.42793898803392,0.318203247925937,0,0.539617372749944,0,0,0.404364963146632,1.58510321173008,0,0,0.731140468893853,4.22600587027022,0,0.282810863907425,0,2.75682671773062,1.32687795048244,0,0,0,0,0,0.281695602532241,0.430234056612155,0.196498082026242,0,0.354761064070598,0.211107635297664,0.658589785919804,0,0,0.288666338176536,0.670302275535787,0,0.282431402330337,0.43050537267123,0,0.443430153536676,0.689170200620878,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0.0711418433484141,0.159426272728822,0.399158742865633,0.191505370132367,0,0.324621940274555,0,0.228234679033192,0.156679895773023,0,0,0.481764225311099,0.403599414382095,0,0.343505344755765,0.307240764308458,0.223676107892416,0.500547425135725,0,0.278406173895242,1.23087398947712,0.270455678475983,1.33228787199128,0,0,0,0,0.111443384277478,0.284136146806413,0,0,0.307160702099232,0,0,0.445234820091624,0.494411622680279,0,0,0.276283915531148,0,0.818149460017238,0.123084805461069,0.933118762985422,0.0898683511473268,0,0.511572370226872,0.49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| ||
|short_description=p14@RUNX1 | |||
}} | }} |
Latest revision as of 06:35, 18 September 2015
Short description: | p14@RUNX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_RUNX1_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | -148bp_to_D10570_5end |
EntrezGene: | RUNX1 |
HGNC: | 10471 |
UniProt: | Q01196 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.10e-33 | 76 |
bone element | 2.54e-31 | 82 |
skeletal element | 4.36e-29 | 90 |
skeletal system | 6.15e-25 | 100 |
immune system | 1.21e-24 | 93 |
hematopoietic system | 8.67e-23 | 98 |
blood island | 8.67e-23 | 98 |
musculoskeletal system | 8.73e-20 | 167 |
hemolymphoid system | 1.32e-19 | 108 |
lateral plate mesoderm | 5.04e-17 | 203 |
connective tissue | 1.55e-15 | 371 |
mesoderm | 4.30e-11 | 315 |
mesoderm-derived structure | 4.30e-11 | 315 |
presumptive mesoderm | 4.30e-11 | 315 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.01e-11 | 14 |