FFCP PHASE1:Hg19::chr21:34915337..34915397,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr21:34915337..34915397,+ to FFCP PHASE1:Hg19::chr21:34915337..34915397,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6651 | |EntrezGene=6651 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11183 | |HGNC=11183 | ||
|TSSclassifier=strong | |||
|UniProt=P18583,Q6ZRV7 | |UniProt=P18583,Q6ZRV7 | ||
|association_with_transcript=0bp_to_ENST00000290239,ENST00000300278,ENST00000381679,ENST00000381692,ENST00000455528,ENST00000475072,ENST00000492229,NM_032195,NM_138927,uc002ysb.1,uc002ysc.2,uc002ysd.2,uc002yse.1,uc002ysf.1_5end | |||
|cluster_id=chr21:34915337..34915397,+ | |||
|coexpression_cluster_id=C176 | |||
|description=CAGE_peak_1_at_SON_5end | |||
|id=chr21:34915337..34915397,+ | |||
|ontology_enrichment_celltype=CL:0000037!2.22e-27!172;CL:0000566!2.22e-27!172;CL:0000738!3.57e-27!140;CL:0002032!1.98e-25!165;CL:0000837!1.98e-25!165;CL:0000988!5.01e-24!182;CL:0002031!3.59e-20!124;CL:0000763!1.29e-18!112;CL:0000049!1.29e-18!112;CL:0002087!7.10e-18!119;CL:0000766!3.53e-17!76;CL:0002057!1.93e-15!42;CL:0000860!2.16e-14!45;CL:0000839!7.29e-14!70;CL:0000557!2.26e-13!71;CL:0002009!1.79e-11!65;CL:0002194!6.37e-11!63;CL:0000576!6.37e-11!63;CL:0000040!6.37e-11!63;CL:0000559!6.37e-11!63;CL:0000542!9.50e-07!53;CL:0000051!9.50e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.99e-14;33!CL:0002057;2.99e-14;33!CL:0000576;2.76e-10;48!CL:0000473;2.28e-09;39!CL:0000234;2.28e-09;39!CL:0000766;2.48e-08;69!CL:0002087;9.83e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,6.41e-28,168;CL:0000738,7.33e-28,136;CL:0002032,5.86e-26,161;CL:0000837,5.86e-26,161;CL:0000988,4.89e-25,177;CL:0002031,9.31e-21,120;CL:0000763,3.19e-19,108;CL:0000049,3.19e-19,108;CL:0002087,2.03e-18,115;CL:0000766,4.94e-18,72;CL:0000860,1.93e-15,42;CL:0002057,1.93e-15,42;CL:0000839,1.31e-14,66;CL:0000557,4.45e-14,67;CL:0000473,1.68e-12,48;CL:0000234,1.68e-12,48;CL:0002009,3.93e-12,61;CL:0002194,1.45e-11,59;CL:0000576,1.45e-11,59;CL:0000040,1.45e-11,59;CL:0000559,1.45e-11,59;CL:0000542,9.50e-07,53;CL:0000051,9.50e-07,53 | |||
|ontology_enrichment_development_v019=CL:0002057;1.90e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.44e-19!115;UBERON:0002390!3.02e-14!102;UBERON:0003061!3.02e-14!102;UBERON:0002193!4.95e-12!112;UBERON:0001474!1.63e-11!86;UBERON:0002371!6.57e-11!80;UBERON:0001049!6.33e-10!57;UBERON:0005068!6.33e-10!57;UBERON:0006241!6.33e-10!57;UBERON:0007135!6.33e-10!57;UBERON:0002780!4.12e-09!41;UBERON:0001890!4.12e-09!41;UBERON:0006240!4.12e-09!41;UBERON:0003080!9.37e-09!42;UBERON:0004765!1.88e-08!101;UBERON:0001434!1.88e-08!101;UBERON:0000955!2.52e-08!69;UBERON:0006238!2.52e-08!69;UBERON:0001017!2.91e-08!82;UBERON:0000073!3.45e-08!94;UBERON:0001016!3.45e-08!94;UBERON:0002616!5.42e-08!59;UBERON:0005743!8.63e-08!86;UBERON:0002405!8.91e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;9.68e-07;41!UBERON:0001890;9.68e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.90e-18,114;UBERON:0002390,9.33e-15,98;UBERON:0003061,9.33e-15,98;UBERON:0002193,2.04e-12,108;UBERON:0001474,5.27e-12,82;UBERON:0002371,2.08e-11,76;UBERON:0002405,2.63e-10,93;UBERON:0001049,3.05e-10,56;UBERON:0005068,3.05e-10,56;UBERON:0006241,3.05e-10,56;UBERON:0007135,3.05e-10,56;UBERON:0000073,1.62e-09,53;UBERON:0002616,1.62e-09,53;UBERON:0004765,1.68e-09,90;UBERON:0002780,4.12e-09,41;UBERON:0001890,4.12e-09,41;UBERON:0003080,4.12e-09,41;UBERON:0006240,4.12e-09,41;UBERON:0001016,7.62e-09,89;UBERON:0000955,1.46e-08,68;UBERON:0006238,1.46e-08,68;UBERON:0001017,1.80e-08,81;UBERON:0001434,8.09e-08,100 | |||
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| ||
|short_description=p1@SON | |||
}} | }} |
Latest revision as of 04:47, 18 September 2015
Short description: | p1@SON |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SON_5end |
Coexpression cluster: | C176_Eosinophils_Neutrophils_Mast_CD14_CD4_Basophils_CD19 |
Association with transcript: | 0bp_to_ENST00000290239, ENST00000300278, ENST00000381679, ENST00000381692, ENST00000455528, ENST00000475072, ENST00000492229, NM_032195, NM_138927, uc002ysb.1, uc002ysc.2, uc002ysd.2, uc002yse.1, uc002ysf.1_5end |
EntrezGene: | SON |
HGNC: | 11183 |
UniProt: | P18583Q6ZRV7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 6.41e-28 | 168 |
leukocyte | 7.33e-28 | 136 |
hematopoietic oligopotent progenitor cell | 5.86e-26 | 161 |
hematopoietic multipotent progenitor cell | 5.86e-26 | 161 |
hematopoietic cell | 4.89e-25 | 177 |
hematopoietic lineage restricted progenitor cell | 9.31e-21 | 120 |
myeloid cell | 3.19e-19 | 108 |
common myeloid progenitor | 3.19e-19 | 108 |
nongranular leukocyte | 2.03e-18 | 115 |
myeloid leukocyte | 4.94e-18 | 72 |
classical monocyte | 1.93e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.93e-15 | 42 |
myeloid lineage restricted progenitor cell | 1.31e-14 | 66 |
granulocyte monocyte progenitor cell | 4.45e-14 | 67 |
defensive cell | 1.68e-12 | 48 |
phagocyte | 1.68e-12 | 48 |
macrophage dendritic cell progenitor | 3.93e-12 | 61 |
monopoietic cell | 1.45e-11 | 59 |
monocyte | 1.45e-11 | 59 |
monoblast | 1.45e-11 | 59 |
promonocyte | 1.45e-11 | 59 |
lymphocyte | 9.50e-07 | 53 |
common lymphoid progenitor | 9.50e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.90e-18 | 114 |
hematopoietic system | 9.33e-15 | 98 |
blood island | 9.33e-15 | 98 |
hemolymphoid system | 2.04e-12 | 108 |
bone element | 5.27e-12 | 82 |
bone marrow | 2.08e-11 | 76 |
immune system | 2.63e-10 | 93 |
neural tube | 3.05e-10 | 56 |
neural rod | 3.05e-10 | 56 |
future spinal cord | 3.05e-10 | 56 |
neural keel | 3.05e-10 | 56 |
regional part of nervous system | 1.62e-09 | 53 |
regional part of brain | 1.62e-09 | 53 |
skeletal element | 1.68e-09 | 90 |
regional part of forebrain | 4.12e-09 | 41 |
forebrain | 4.12e-09 | 41 |
anterior neural tube | 4.12e-09 | 41 |
future forebrain | 4.12e-09 | 41 |
nervous system | 7.62e-09 | 89 |
brain | 1.46e-08 | 68 |
future brain | 1.46e-08 | 68 |
central nervous system | 1.80e-08 | 81 |
skeletal system | 8.09e-08 | 100 |