FFCP PHASE1:Hg19::chr21:27284138..27284164,-: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr21:27284138..27284164,- to FFCP PHASE1:Hg19::chr21:27284138..27284164,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr21:27284138..27284164,- | |||
|coexpression_cluster_id=C2629 | |||
|description=CAGE_peak_at_chr21:27284138..27284164,- | |||
|id=chr21:27284138..27284164,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002138;1.26e-16;6!CL:0002139;1.20e-08;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0005020,1.43e-16,6;CL:0002138,1.43e-16,6;CL:0005022,1.43e-16,6;CL:0002139,1.11e-08,24;CL:0000115,1.90e-07,36 | |||
|ontology_enrichment_development_v019=CL:0005022;1.26e-16;6!UBERON:0007297;4.39e-13;2!UBERON:0006241;6.07e-09;3!UBERON:0003057;6.07e-09;3!UBERON:0005754;1.27e-07;1!UBERON:0006222;1.63e-07;1!UBERON:0005425;1.63e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.92e-11!57;UBERON:0005068!1.92e-11!57;UBERON:0006241!1.92e-11!57;UBERON:0007135!1.92e-11!57;UBERON:0007023!6.13e-10!115;UBERON:0002346!1.63e-09!90;UBERON:0002616!2.06e-09!59;UBERON:0000468!2.91e-09!659;UBERON:0000477!6.54e-09!286;UBERON:0002780!6.98e-09!41;UBERON:0001890!6.98e-09!41;UBERON:0006240!6.98e-09!41;UBERON:0003075!9.48e-09!86;UBERON:0007284!9.48e-09!86;UBERON:0000924!9.96e-09!173;UBERON:0006601!9.96e-09!173;UBERON:0000922!1.00e-08!612;UBERON:0002020!1.22e-08!34;UBERON:0003528!1.22e-08!34;UBERON:0001893!1.34e-08!34;UBERON:0004111!1.45e-08!241;UBERON:0003080!2.16e-08!42;UBERON:0002791!3.99e-08!33;UBERON:0004121!4.42e-08!169;UBERON:0001017!6.05e-08!82;UBERON:0000073!6.43e-08!94;UBERON:0001016!6.43e-08!94;UBERON:0005743!9.35e-08!86;UBERON:0001869!9.93e-08!32;UBERON:0000033!1.58e-07!123;UBERON:0000923!1.77e-07!604;UBERON:0005291!1.77e-07!604;UBERON:0006598!1.77e-07!604;UBERON:0002532!1.77e-07!604;UBERON:0002050!2.38e-07!605;UBERON:0005423!2.38e-07!605;UBERON:0000955!2.77e-07!69;UBERON:0006238!2.77e-07!69;UBERON:0000153!2.98e-07!129;UBERON:0007811!2.98e-07!129;UBERON:0000467!3.35e-07!625;UBERON:0000480!4.50e-07!626;UBERON:0000481!7.32e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0001473;1.67e-12;8!UBERON:0004536;1.67e-12;8!UBERON:0006558;1.67e-12;8!UBERON:0002021;4.78e-11;5!UBERON:0002465;5.05e-10;10!UBERON:0006947;5.18e-09;3!UBERON:0004054;5.18e-09;3!UBERON:0002240;6.07e-09;3!UBERON:0005174;6.07e-09;3!UBERON:0001137;6.07e-09;3!UBERON:0000998;1.27e-07;1!UBERON:0006868;1.27e-07;1!UBERON:0000941;1.63e-07;1!UBERON:0001785;1.63e-07;1!UBERON:0002464;1.63e-07;1!UBERON:0004904;1.63e-07;1!UBERON:0001021;1.63e-07;1!UBERON:0002135;3.84e-07;1!UBERON:0001301;3.84e-07;1!UBERON:0005904;5.85e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,1.83e-12,8;UBERON:0004536,1.83e-12,8;UBERON:0006558,1.83e-12,8;UBERON:0002021,8.05e-11,5;UBERON:0002465,5.43e-10,10;UBERON:0002240,5.40e-09,3;UBERON:0005174,5.40e-09,3;UBERON:0001137,5.40e-09,3;UBERON:0006947,7.42e-09,3;UBERON:0004054,7.42e-09,3;UBERON:0001049,1.26e-08,56;UBERON:0005068,1.26e-08,56;UBERON:0006241,1.26e-08,56;UBERON:0007135,1.26e-08,56;UBERON:0010371,3.56e-08,104;UBERON:0003075,5.88e-08,82;UBERON:0007284,5.88e-08,82;UBERON:0000998,1.36e-07,1;UBERON:0006868,1.36e-07,1;UBERON:0000941,1.44e-07,1;UBERON:0001785,1.44e-07,1;UBERON:0002464,1.44e-07,1;UBERON:0004904,1.44e-07,1;UBERON:0001021,1.44e-07,1;UBERON:0003902,1.44e-07,1;UBERON:0005425,1.44e-07,1;UBERON:0002346,1.73e-07,86;UBERON:0004111,2.13e-07,240;UBERON:0002135,4.89e-07,1;UBERON:0001016,5.65e-07,89;UBERON:0001301,6.20e-07,1;UBERON:0005904,7.64e-07,4 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0.783556884599516,0,0,0,0.263766978228454,0.247532705920093,0,0.672325146451775,0.602694528023977,0,0.487932798790507,0.123121058076788,0,0.313454721478088,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0.464858073811369,0,0.309706370895104,0,0,0,0.344745680736619,0,0,0.564727018627814,0,0,0,0,0,0,0,0,0.290209238628584,0.56738522469114,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0,0.724232594804119,0,0,0.189069634328136,0,0.087834785693126,0.261958150995425,0,0,0,0.348259474598534,0.398873881556595,0,0,0.371457501329565,0,0,0.694281003215189,0,0,1.6507082516404,0,3.87625138753993,8.18262404179434,2.00832367658802,0.402829317109147,0,0.488124115096339,14.3388601334889,0,0.714397826272638,0.22452937262617,0.225222960966644,0,0,0.183201743930407,0,0,0.872188104285069,0.496971951695318,0.379891534993739,0,0.860509862246441,0.354668382198357,0,0,0,0.311211035399766,0.269421344139376,0,0.454072282934794,0,0,0,0,0.448346041655403,0.117434498643765,0,0.140450806702248,0,0.245668634623536,0,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0.45071417671979,0.453728732640084,0.538168907066586,0.427114777637135,0,0,0,0,0,0,0.0974370051611986,0,0.184099797284599,0,0.355009592516614,0.10075209822764,0,0,0.818238361772504,0.286804595389004,0.853815942907168,0.132529768321485,0.116193942869518,0.414644220061482,1.26160425437814,0,0,0,0,0,0,0.236613600079688,0,0,0.220587945464788,0.217879444092406,0,0.808987848960987,0,0.38474715694639,1.4763109092493,0,0,0,0,0,0.590789906681404,0,0,0.343135620597051,0.878002283269004,1.1240175325762,0.402115889646523,0.185176890317059,0,0,0,0.231860809950154,0.234817388471643,0.721832238805369,0.462985512576611,1.14152491340759,0,0,0.492434012174795,0,0,0,1.00789276919316,0.141775097242386,0.268675568108545,0.581267877027924,0.383382679165211,0,0,0,0,0,0.063497894292169,0,0,0,0.205654985406647,0,0,0,0,0.22001485746285,0.904902010304444,0,0,0.531876233169741,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0,0.301439377059586,0,0.299918973546171,0,0,0,0.239624855491583,1.14861935834114,0,0.289562613335158,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49076596687656,0.500170521059677,0.542530047399471,0.415941723061614,0.713715955188647,0,0.117141414992713,0,0,0,0.664225598535437,0,0.347534457872331,0,0,0.206768026122887,0,0,0,0,0,0,0,0.280660094433074,0.128139149255701,0,0,0,0.154209693802656,0.177561725313127,0,0,0.116210378459959,0.241718899183244,1.60405176242628,0.368323955743585,0.114814448164607,0,0.655622074797121,0,0.385076685522074,0,0,0.844413031143006,0,0.170093705276516,0.215915916102139,0,0.270946437543853,0,0,0,0,0,0,0,0.328014645699706,0.325378394664303,0.206082023295445,0.183138929636687,0.247528499761764,0,1.30012049207304,0,0.096670718292122,0.154048617114644,0.15350367472613,0,0.107420244868274,0.290033387828457,0.0852266274161009,0.0890320356467374,0.826424576804891,0.384380134730212,0.127612712494584,0.50578890427775,0,0.31481234683064,0,0,0,0,0.18532421910392,0,0.372158369359667,0,0,0,0,0,1.56989728039846,0.359744915166629,0.823611089208164,0.117812402345686,0.202182481573316,0,0,0,0.243713489631284,0,0.136499911407986,0.424216295861138,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0.354761064070598,0.211107635297664,0.329294892959902,0,0.349934720244983,0.192444225451024,0,0,0.282431402330337,0.43050537267123,1.68471475667626,0,0.229723400206959,0,0.764637207142375,0,0,0,0,0,0,0.427296284509893,0.962479855263359,0.245040215981032,0.185803175125719,0.144269212976445,0,0,0.199579371432817,0,0,0,0,0,0.313359791546046,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0.18714054040822,0,0,6.01794275098383,0.284136146806413,0.23874448473769,0,0,0,0.281338832821026,0.222617410045812,0,0,0.398495976502139,0,0,0,0,0,0.0898683511473268,0.537063524026827,0,0.295930216910801,0,0,0,1.20598527610407,0,0,0,0,0,0,0,0,0,0,3.54296554325536,0.241192877250816,0,0,0.886642856860642,0.219385397153973,0,0.139423744278603,0,0.227884111694002,0.46112780877612,0.179515288819544,0.325942115766024,0,0.0915975934018623,0,0,0.156980256395025,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0.611030144933625,0,0,0,0.606610196826093,0,2.10838001152805,0.547364367646998,0,0.728341138602278,0.394584402849391,0,0.61214552326098,0.884612114798832,0,0.103688191397247,0,0.330991955875499,0.627865836814451,0,0,1.52542140314453,0.173559738335131,0.195984794828755,0.0870592065804026,1.04836000945218,0.171986032471617,0.0967563312890851,0.292357268344742,0,0.193978032976839,0.264768380074501,0.451961481561065,0,0.397429223405979,0.696418755514666,0,0.240476460754601,0,0.599428828746391,0.144090417154106,0,0,0,0,0.235694034616795,0,0.209205692624666,0.305994652908965,0,0.600420288709789,0.410716136675979,0,0.42976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| ||
|short_description=p@chr21:27284138..27284164,- | |||
}} | }} |
Latest revision as of 17:01, 28 July 2015
Short description: | p@chr21:27284138..27284164, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:27284138..27284164, - |
Coexpression cluster: | C2629_Endothelial_adult_corpus_thalamus_optic_pons_substantia |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 1.43e-16 | 6 |
endothelial cell of lymphatic vessel | 1.43e-16 | 6 |
vascular lymphangioblast | 1.43e-16 | 6 |
endothelial cell of vascular tree | 1.11e-08 | 24 |
endothelial cell | 1.90e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
lymphatic vessel | 1.83e-12 | 8 |
lymph vasculature | 1.83e-12 | 8 |
lymphatic part of lymphoid system | 1.83e-12 | 8 |
occipital lobe | 8.05e-11 | 5 |
lymphoid system | 5.43e-10 | 10 |
spinal cord | 5.40e-09 | 3 |
dorsal region element | 5.40e-09 | 3 |
dorsum | 5.40e-09 | 3 |
male genital duct | 7.42e-09 | 3 |
internal male genitalia | 7.42e-09 | 3 |
neural tube | 1.26e-08 | 56 |
neural rod | 1.26e-08 | 56 |
future spinal cord | 1.26e-08 | 56 |
neural keel | 1.26e-08 | 56 |
ecto-epithelium | 3.56e-08 | 104 |
neural plate | 5.88e-08 | 82 |
presumptive neural plate | 5.88e-08 | 82 |
seminal vesicle | 1.36e-07 | 1 |
seminal fluid secreting gland | 1.36e-07 | 1 |
cranial nerve II | 1.44e-07 | 1 |
cranial nerve | 1.44e-07 | 1 |
nerve trunk | 1.44e-07 | 1 |
nerve connecting eye with brain | 1.44e-07 | 1 |
nerve | 1.44e-07 | 1 |
retinal neural layer | 1.44e-07 | 1 |
presumptive neural retina | 1.44e-07 | 1 |
neurectoderm | 1.73e-07 | 86 |
anatomical conduit | 2.13e-07 | 240 |
mitral valve | 4.89e-07 | 1 |
nervous system | 5.65e-07 | 89 |
epididymis | 6.20e-07 | 1 |
duct of male reproductive system | 7.64e-07 | 4 |