FFCP PHASE1:Hg19::chr20:634000..634048,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr20:634000..634048,- to FFCP PHASE1:Hg19::chr20:634000..634048,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=140809 | |EntrezGene=140809 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16132 | |HGNC=16132 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BYN0 | |UniProt=Q9BYN0 | ||
|association_with_transcript=0bp_to_ENST00000381962_5end | |||
|cluster_id=chr20:634000..634048,- | |||
|description=CAGE_peak_2_at_SRXN1_5end | |||
|id=chr20:634000..634048,- | |||
|ontology_enrichment_celltype=CL:0002057!1.61e-08!42;CL:0000860!2.01e-08!45;CL:0002194!1.48e-07!63;CL:0000576!1.48e-07!63;CL:0000040!1.48e-07!63;CL:0000559!1.48e-07!63;CL:0000066!2.74e-07!254;CL:0000839!7.51e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.82e-17;33!CL:0002057;4.82e-17;33!CL:0000473;1.43e-12;39!CL:0000234;1.43e-12;39!CL:0000576;1.98e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.24e-11,42;CL:0002057,3.24e-11,42;CL:0002194,3.18e-10,59;CL:0000576,3.18e-10,59;CL:0000040,3.18e-10,59;CL:0000559,3.18e-10,59;CL:0000473,3.92e-10,48;CL:0000234,3.92e-10,48;CL:0000839,1.42e-09,66;CL:0002009,2.27e-09,61;CL:0000557,8.33e-08,67;CL:0000766,5.82e-07,72 | |||
|ontology_enrichment_development_v019=CL:0002057;1.09e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002619!8.88e-08!22;UBERON:0001869!4.67e-07!32;UBERON:0001950!5.48e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.76e-08;22!UBERON:0001950;2.31e-07;20!UBERON:0001869;9.72e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,2.36e-09,22;UBERON:0001950,2.08e-08,20;UBERON:0001869,2.56e-08,32;UBERON:0003528,2.12e-07,34;UBERON:0002020,2.12e-07,34;UBERON:0000956,2.74e-07,25;UBERON:0000203,2.74e-07,25;UBERON:0001893,2.85e-07,34;UBERON:0002791,3.11e-07,32 | |||
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| ||
|short_description=p2@SRXN1 | |||
}} | }} |
Latest revision as of 15:45, 17 September 2015
Short description: | p2@SRXN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SRXN1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000381962_5end |
EntrezGene: | SRXN1 |
HGNC: | 16132 |
UniProt: | Q9BYN0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.24e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.24e-11 | 42 |
monopoietic cell | 3.18e-10 | 59 |
monocyte | 3.18e-10 | 59 |
monoblast | 3.18e-10 | 59 |
promonocyte | 3.18e-10 | 59 |
defensive cell | 3.92e-10 | 48 |
phagocyte | 3.92e-10 | 48 |
myeloid lineage restricted progenitor cell | 1.42e-09 | 66 |
macrophage dendritic cell progenitor | 2.27e-09 | 61 |
granulocyte monocyte progenitor cell | 8.33e-08 | 67 |
myeloid leukocyte | 5.82e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
regional part of cerebral cortex | 2.36e-09 | 22 |
neocortex | 2.08e-08 | 20 |
cerebral hemisphere | 2.56e-08 | 32 |
brain grey matter | 2.12e-07 | 34 |
gray matter | 2.12e-07 | 34 |
cerebral cortex | 2.74e-07 | 25 |
pallium | 2.74e-07 | 25 |
telencephalon | 2.85e-07 | 34 |
regional part of telencephalon | 3.11e-07 | 32 |